New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3299608122 (0.890)20 (0.170) 7/158 NT 15.0% coding (308/444 nt) yhbP UPF0306 family protein
?NC_000913 = 3299630 118 (0.970)coding (286/444 nt) yhbP UPF0306 family protein

Only 100 of 250 total aligned reads displayed.

TTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCT  >  NC_000913/3299511‑3299707
                                                                                                 |                                                                                                   
 tttttACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGAt                                                                                                  <  1:111503/100‑1 (MQ=255)
 tttttACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGAt                                                                                                  >  1:854482/1‑100 (MQ=255)
 tttttAACCAAGCCCAGCGTGTTGTGGGTGAATTTGATTTCATCGAGCAGGATTTCGTACACCGGGGACGAAAGCATTCTGGCAACCGGAAAGcgacga                                                                                                   >  2:2684345/1‑99 (MQ=255)
  ttttACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGCGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGAtt                                                                                                 >  2:758328/1‑100 (MQ=255)
  ttttACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGAtt                                                                                                 >  1:187279/1‑100 (MQ=255)
       ccAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACg                                                                                            >  1:1526349/1‑100 (MQ=255)
       ccAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGAGTTCCCACACCGGGGCCGACAGCATTCTGGCAACCCGAAACCGTCGAttttctg                                                                                            >  2:1673834/1‑95 (MQ=255)
          aaGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCt                                                                                         <  2:2075113/100‑1 (MQ=255)
                  cGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGcgcgcg                                                                                 <  2:1122204/100‑1 (MQ=255)
                  cGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGcgcgcg                                                                                 <  1:2080249/100‑1 (MQ=255)
                   gtgtTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGa                                                                                <  1:2280919/100‑1 (MQ=255)
                    tgttgtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAg                                                                               <  1:3368117/100‑1 (MQ=255)
                      ttgtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCATACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgt                                                                             >  2:2226899‑M2/1‑98 (MQ=255)
                       tgtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtc                                                                            <  1:237481‑M2/100‑4 (MQ=255)
                       tgtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtc                                                                            >  2:2821326‑M2/1‑97 (MQ=255)
                        gtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcg                                                                           <  2:2018271‑M2/100‑5 (MQ=255)
                             tGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttc                                                                      <  1:697734‑M1/100‑32 (MQ=255)
                             tGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttc                                                                      <  2:3703017‑M1/100‑32 (MQ=255)
                              gAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttcc                                                                     <  1:723098‑M1/100‑33 (MQ=255)
                              gAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttcc                                                                     <  1:2733423‑M1/100‑33 (MQ=255)
                              cggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctgggaggtgaGGATAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTtcn                                                                     >  1:1475021‑M1/59‑99 (MQ=255)
                              cggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTcc                                                                     >  1:584457‑M1/59‑100 (MQ=255)
                               ggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCt                                                                    >  1:1066066‑M1/58‑100 (MQ=255)
                               ggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCt                                                                    >  1:2823945‑M1/58‑100 (MQ=255)
                               ggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCt                                                                    >  2:1285730‑M1/58‑100 (MQ=255)
                                gtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTc                                                                   >  1:594309‑M1/57‑100 (MQ=255)
                                aTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccgg                                                                   <  1:3247423‑M1/100‑35 (MQ=255)
                                aTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTc                                                                   >  1:3514264/1‑100 (MQ=255)
                                aTTCGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttcc                                                                     >  2:2815835‑M2/1‑88 (MQ=255)
                                 tagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCa                                                                  >  1:943595‑M1/56‑100 (MQ=255)
                                    cgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCt                                                               >  1:2360674‑M1/53‑100 (MQ=255)
                                       ttCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTcc                                                            >  2:2010572/1‑100 (MQ=255)
                                         cATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCACCCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCCGCTTCCAg                                                          >  2:1095229/1‑100 (MQ=255)
                                         cATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAg                                                          >  1:2546960/1‑100 (MQ=255)
                                          aTCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAg                                                          <  1:3032698/99‑1 (MQ=255)
                                           tCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGcc                                                        <  1:3788099/100‑1 (MQ=255)
                                               gCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCg                                                    >  2:2382850/1‑100 (MQ=255)
                                               gCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCg                                                    <  2:348108/100‑1 (MQ=255)
                                                ccGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCg                                                    >  2:1029008/1‑99 (MQ=255)
                                                 cGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcg                                                  <  1:2493118‑M1/100‑52 (MQ=255)
                                                 cGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGa                                                  <  2:1299662/100‑1 (MQ=255)
                                                 cGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGa                                                  >  1:220902/1‑100 (MQ=255)
                                                  ggATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGa                                                  >  2:544555/1‑99 (MQ=255)
                                                      ttCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCa                                             <  2:172154/100‑1 (MQ=255)
                                                      ttCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCa                                             >  1:1918339/1‑100 (MQ=255)
                                                       ncccACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAc                                            >  2:1441565/2‑100 (MQ=255)
                                                        cccACGCCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTCCGCCCTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAc                                            <  2:3446658/99‑1 (MQ=255)
                                                        cccACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAcc                                           >  2:2151784/1‑100 (MQ=255)
                                                        cccACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAcc                                           <  2:3364801/100‑1 (MQ=255)
                                                         ccACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCt                                          >  1:1329087/1‑100 (MQ=255)
                                                         ccACACCGGGGCCGACAGCATTCAGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCt                                          <  2:1571947/100‑1 (MQ=255)
                                                          cacaCCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATGTCACCtt                                         <  2:1998852/100‑1 (MQ=255)
                                                            cacCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTa                                       >  2:227767/1‑100 (MQ=255)
                                                              ccGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTaaa                                     >  2:2811436/1‑100 (MQ=255)
                                                                  ggCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGc                                 <  1:121555/100‑1 (MQ=255)
                                                                   gCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGca                                >  2:1330061/1‑100 (MQ=255)
                                                                   gCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGca                                <  1:3443665/100‑1 (MQ=255)
                                                                    ccGTCAGCATTCTGGCAACCGGAAAGCGACTATTGTACCCCTTGCCCGCTAGGTCCCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTACACCGca                                <  2:3523792/99‑1 (MQ=255)
                                                                    ccGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGcac                               >  1:1787319/1‑100 (MQ=255)
                                                                      gACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCacac                             >  2:1484813/1‑100 (MQ=255)
                                                                      gACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCacac                             >  2:351864/1‑100 (MQ=255)
                                                                          gCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACcgcg                         <  1:537530/100‑1 (MQ=255)
                                                                          gCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACcgcg                         >  2:1770862/1‑100 (MQ=255)
                                                                          gCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACcgcg                         <  1:3214409/100‑1 (MQ=255)
                                                                               cTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTa                    <  2:3329782/100‑1 (MQ=255)
                                                                               cTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTa                    <  2:2928380/100‑1 (MQ=255)
                                                                                 ggCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaat                  <  2:1351926‑M2/100‑62 (MQ=255)
                                                                                 ggCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaat                  <  2:1957150‑M2/100‑62 (MQ=255)
                                                                                  gCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACg                 <  1:3295607/100‑1 (MQ=255)
                                                                                   cAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGc                >  2:1646781/1‑100 (MQ=255)
                                                                                      ccGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaat             <  2:3148077‑M2/100‑67 (MQ=255)
                                                                                      ccGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaat             <  1:26682‑M2/100‑67 (MQ=255)
                                                                                      ccGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggcgttggacatcccgctcgatgaaatcaaa              <  2:1039551‑M2/99‑66 (MQ=255)
                                                                                      ccGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTAc             >  1:3480276/1‑100 (MQ=255)
                                                                                      ccGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTAc             >  1:1992039/1‑100 (MQ=255)
                                                                                      ccGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCCCACCTTTAAACTGCACACCGCGAATTAACGCTAc             >  2:9122/1‑100 (MQ=255)
                                                                                       cGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaatt            <  2:3794880‑M2/100‑68 (MQ=255)
                                                                                        ggAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgagatcaaattc           >  2:3787583‑M1/1‑10 (MQ=255)
                                                                                        ggAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattc           >  1:1834769‑M1/1‑10 (MQ=255)
                                                                                        ggAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattc           >  1:771609‑M1/1‑10 (MQ=255)
                                                                                        ggAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtgggccccggtgtgggaaatccggctcgatgaaatcaaattc           <  1:1703878‑M2/100‑69 (MQ=255)
                                                                                        ggAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggcgtgggcaatccggcacgatgaaatcaaa              <  2:2576830‑M2/97‑66 (MQ=255)
                                                                                        GGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCg           <  1:904326‑M1/100‑1 (MQ=255)
                                                                                        GGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCg           >  2:1791066‑M1/1‑100 (MQ=255)
                                                                                         gAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattca          <  1:2870922‑M2/100‑70 (MQ=255)
                                                                                         gAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattca          <  1:801371‑M2/100‑70 (MQ=255)
                                                                                         gAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattc           <  2:3707877‑M2/99‑69 (MQ=255)
                                                                                          aaaGCGACctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattcac         >  1:2438571‑M1/1‑8 (MQ=255)
                                                                                          AAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGtt         >  2:3602950‑M1/1‑100 (MQ=255)
                                                                                           aaGCGACctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattcacc        <  2:3133437‑M1/100‑94 (MQ=255)
                                                                                           AAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGttt        <  2:2563371‑M1/100‑1 (MQ=255)
                                                                                              cGACctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattcaccgac     <  2:2429723‑M1/100‑97 (MQ=255)
                                                                                              CGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCTAATTAACGCTACCGTCTTCg     >  2:613719‑M1/1‑100 (MQ=255)
                                                                                              CGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCg     >  1:2945636‑M1/1‑100 (MQ=255)
                                                                                               GACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCgg    <  2:480811‑M1/100‑1 (MQ=255)
                                                                                               GACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCgg    <  1:3335364‑M1/100‑1 (MQ=255)
                                                                                                ACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGc   >  1:3616080‑M1/1‑100 (MQ=255)
                                                                                                ACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGc   >  1:261517‑M1/1‑100 (MQ=255)
                                                                                                 cctcgcgcggaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattcaccgacaac  >  2:3167307‑M1/1‑1 (MQ=255)
                                                                                                 CGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCt  <  1:2120047‑M1/100‑1 (MQ=255)
                                                                                                 |                                                                                                   
TTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCT  >  NC_000913/3299511‑3299707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.