New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4476539 =143 (1.050)7 (0.050) 7/172 NT 4.9% coding (1103/1815 nt) yjgL SopA‑central‑domain‑like hexapeptide repeat protein
?NC_000913 4476562 = 135 (1.020)coding (1126/1815 nt) yjgL SopA‑central‑domain‑like hexapeptide repeat protein
Rejected: Frequency below cutoff threshold.

Only 100 of 175 total aligned reads displayed.

ACAATGAAATTAATGACATCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATACTAAAAAGATAAA  >  NC_000913/4476440‑4476638
                                                                                                   |                                                                                                   
aCAATGAAATTAATGACATCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCt                                                                                                     >  1:1254423/1‑100 (MQ=255)
 tttattacggagcatgcatgctttatctttttagtatcatcaaaatattgcatgcttttattaaaacaccaatccagtattcttacatcattaatataTg                                                                                                    >  1:3663180‑M1/99‑100 (MQ=255)
 tttattacggagcatgcatgctttatctttttagtatcatcaaaatattgcatgcttttattaaaacaccaatccagtattcttacatcattaatataTg                                                                                                    <  1:3717871‑M1/2‑1 (MQ=255)
 cAATGAAATTAATGACATCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTg                                                                                                    >  2:2665942/1‑100 (MQ=255)
  ttattacggagcatgcatgctttatctttttagtatcatcaaaatattgcatgcttttattaaaacaccaatccagtattcttacatcattaatataTgg                                                                                                   <  1:3528758‑M1/3‑1 (MQ=255)
  aaTGAAATTAATGACATCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTgg                                                                                                   <  1:1083220/100‑1 (MQ=255)
    ttaaaTTAATGACATCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGgag                                                                                                 <  2:1355215/98‑1 (MQ=255)
    tGAAATTAATGACATCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGgag                                                                                                 <  2:3557758/100‑1 (MQ=255)
      aaaTTAATGACATCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGAc                                                                                               >  1:15251/1‑100 (MQ=255)
           aaTGACATCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACttttt                                                                                          <  1:3087953/100‑1 (MQ=255)
                cATCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCaaaa                                                                                     >  1:3760472/1‑100 (MQ=255)
                cATCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCaaaa                                                                                     >  2:795965/1‑100 (MQ=255)
                cATCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCaaaa                                                                                     >  1:258240/1‑100 (MQ=255)
                 aTCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAAt                                                                                    >  2:3379703/1‑100 (MQ=255)
                  tCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATc                                                                                   >  1:125959/1‑100 (MQ=255)
                  tCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATc                                                                                   >  2:2793710/1‑100 (MQ=255)
                  tCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATc                                                                                   >  1:2712361/1‑100 (MQ=255)
                   cAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATcc                                                                                  <  1:3515903/100‑1 (MQ=255)
                    aaaGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATccc                                                                                 <  1:670393/100‑1 (MQ=255)
                    aaaGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATccc                                                                                 >  1:1054011/1‑100 (MQ=255)
                    aaaGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATccc                                                                                 <  1:2990140/100‑1 (MQ=255)
                      aGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCa                                                                               <  1:2791640/100‑1 (MQ=255)
                       gTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATccc                                                                                 <  2:810083/97‑1 (MQ=255)
                            ccTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATAtt                                                                         <  1:3643274/100‑1 (MQ=255)
                            ccTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATAtt                                                                         >  1:2722752/1‑100 (MQ=255)
                             cTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTa                                                                        >  2:2541708/1‑100 (MQ=255)
                                tctcATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAatg                                                                     <  1:3204416/100‑1 (MQ=255)
                                tctcATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAatg                                                                     <  2:185048/100‑1 (MQ=255)
                                tagtatcatcaaaatattgcatgcttttattaaaacaccaatccagtattcttacatcattaatataTGGAGACTTTTTCAAAATCCCCATATATTAatg                                                                     >  2:1908451‑M1/68‑100 (MQ=255)
                                 ctcATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAatga                                                                    <  2:2474177/100‑1 (MQ=255)
                                 ctcATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAatga                                                                    >  2:805587/1‑100 (MQ=255)
                                  tcATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAatgat                                                                   >  2:3537937/1‑100 (MQ=255)
                                  tcATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGACTCTGGAGACTTTTTCAAAATCCCCATATATTAatgat                                                                   >  1:552198/1‑100 (MQ=255)
                                   cATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAATTCCCCATATATTAatctt                                                                   >  2:3776989/1‑96 (MQ=255)
                                   cATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAatgatg                                                                  >  1:2828110/1‑100 (MQ=255)
                                   cATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAatgatg                                                                  <  2:2050765/100‑1 (MQ=255)
                                   cATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAatgat                                                                   >  1:1338276/1‑99 (MQ=255)
                                    atcatcaaaatattgcatgcttttattaaaacaccaatccagtattcttacatcattaatataTGGAGACTTTTTCAAAATCCCCATATATTAATGATGt                                                                 >  1:17291‑M1/64‑100 (MQ=255)
                                    atatTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGt                                                                 >  1:1446254/1‑100 (MQ=255)
                                     tatTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTa                                                                >  1:3376024/1‑100 (MQ=255)
                                     tatTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTa                                                                >  1:434527/1‑100 (MQ=255)
                                      catcaaaatattgcatgcttttattaaaacaccaatccagtattcttacatcagtaatatcTGGAGACTTTTCCAAAATCCCCATATATTAATGATGTaa                                                               >  1:93010‑M1/62‑100 (MQ=255)
                                      atTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTaa                                                               <  2:2879486/100‑1 (MQ=255)
                                       ttCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAg                                                              <  2:2305111/100‑1 (MQ=255)
                                          ttATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAAt                                                           >  2:1737155/1‑100 (MQ=255)
                                             ttGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATACATTAATGATGTAAGAATACt                                                        <  2:252504/100‑1 (MQ=255)
                                              tGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTg                                                       <  1:302304/100‑1 (MQ=255)
                                              tGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTg                                                       <  1:130010/100‑1 (MQ=255)
                                                aTTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGa                                                     >  1:2927060/1‑100 (MQ=255)
                                                 ttCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGAt                                                    <  2:3272236/100‑1 (MQ=255)
                                                   ccTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTg                                                  >  2:1648033/1‑100 (MQ=255)
                                                    cTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTgg                                                 <  2:2325707/100‑1 (MQ=255)
                                                       aGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGgtgt                                              >  1:2074473/1‑100 (MQ=255)
                                                          tgatgCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGtt                                             <  2:1194852/98‑1 (MQ=255)
                                                           gatgCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTta                                          >  1:2266462/1‑100 (MQ=255)
                                                            atgCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTtaa                                         <  1:3731431/100‑1 (MQ=255)
                                                            atgCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTtaa                                         <  2:581948/100‑1 (MQ=255)
                                                             tgCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTtaat                                        >  2:2113877/1‑100 (MQ=255)
                                                             tgCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTtaat                                        >  2:1517377/1‑100 (MQ=255)
                                                             tgCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTtaat                                        >  2:638591/1‑100 (MQ=255)
                                                               cAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTtaataa                                      >  1:1727731/1‑100 (MQ=255)
                                                               cAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTtaataa                                      >  1:2027598/1‑100 (MQ=255)
                                                                aaaGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATaaa                                     <  1:1846000/100‑1 (MQ=255)
                                                                 aaGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATaaaa                                    <  1:1245567/100‑1 (MQ=255)
                                                                  aGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCGTATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATaaaa                                    >  2:695468/1‑99 (MQ=255)
                                                                  aGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAg                                   <  2:1879434/100‑1 (MQ=255)
                                                                  aGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAg                                   <  1:2944914/100‑1 (MQ=255)
                                                                        aCCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTTTTTTTTTTTTTATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCa                             >  2:2701283/1‑100 (MQ=255)
                                                                        aCCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCa                             <  2:950166/100‑1 (MQ=255)
                                                                         ccTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCaa                            >  2:1701902/1‑100 (MQ=255)
                                                                         ccTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCaa                            >  1:74894/1‑100 (MQ=255)
                                                                          cTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAat                           >  1:1552161/1‑100 (MQ=255)
                                                                          cTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAat                           >  2:3543526/1‑100 (MQ=255)
                                                                            tACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAatat                         >  1:2628931/1‑100 (MQ=255)
                                                                               acCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATAtttt                      <  1:799004/100‑1 (MQ=255)
                                                                               acCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATAtttt                      <  2:3139409/100‑1 (MQ=255)
                                                                                ccGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATAtttt                      >  1:2140458/1‑99 (MQ=255)
                                                                                ccGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTtg                     <  2:234296/100‑1 (MQ=255)
                                                                                 cGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTtga                    >  1:1183604/1‑100 (MQ=255)
                                                                                 cGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTtga                    <  1:2045059/100‑1 (MQ=255)
                                                                                  ggTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTtgat                   <  2:1446244/100‑1 (MQ=255)
                                                                                  ggTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTtgat                   <  2:1072005/100‑1 (MQ=255)
                                                                                  ggTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTtgat                   >  1:3639268/1‑100 (MQ=255)
                                                                                   gTCATCGATTCTATTCTAGATACTTTTTCAAAATTCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTtga                    <  2:3329094/98‑1 (MQ=255)
                                                                                    tCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTtgat                   <  2:1835666/98‑1 (MQ=255)
                                                                                     cATCGATTCGATTCTGGAGACTTTTTTTTTTTTTTTTTATATTAATGATGTAAGAATACTGGATTTGTGTTTTATTAAAAGTATGCAATATTTTgatgat                >  2:2768538/1‑100 (MQ=255)
                                                                                     cATCGATTCGATTCTGGAGACTTTTTTTTTTTTTTTTTATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATAtttt                      >  2:51675/1‑94 (MQ=255)
                                                                                     cATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTgatgat                >  2:3455739/1‑100 (MQ=255)
                                                                                      aTCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATa               >  2:3025537/1‑100 (MQ=255)
                                                                                       tcgattcgatTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATAc              <  1:2651419/100‑1 (MQ=255)
                                                                                       tcgattcgatTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATAc              <  1:926491/100‑1 (MQ=255)
                                                                                        cgattcgattCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATACt             >  1:3582485/1‑100 (MQ=255)
                                                                                          attcgattcTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATACTaa           >  1:3552403/1‑100 (MQ=255)
                                                                                            tcgattcTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATACTaaaa         >  1:3058778/1‑100 (MQ=255)
                                                                                             cgattcTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATACTaaaaa        <  1:1911821/100‑1 (MQ=255)
                                                                                              gattcTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATACTAAAAAg       >  2:3125312/1‑100 (MQ=255)
                                                                                              gattcTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATACTAAAAAg       >  2:434832/1‑100 (MQ=255)
                                                                                              gattcTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATACTAAAAAg       <  1:867637/100‑1 (MQ=255)
                                                                                              gattcTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATACTAAAAAg       <  1:1322176/100‑1 (MQ=255)
                                                                                                   TGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATACTAAAAAGATaaa  <  2:2246964‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ACAATGAAATTAATGACATCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATACTAAAAAGATAAA  >  NC_000913/4476440‑4476638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.