| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,596,220 | (TCA)3→2 | coding (182‑184/927 nt) | livH ← | branched‑chain amino acid ABC transporter permease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3596215 = | 2 (0.020) | 103 (0.960) | 67/182 | 0.5 | 98.2% | coding (189/927 nt) | livH | branched‑chain amino acid ABC transporter permease |
| ? | NC_000913 | = 3596211 | 2 (0.020) | coding (193/927 nt) | livH | branched‑chain amino acid ABC transporter permease | |||||
Only 100 of 119 total aligned reads displayed.
GCTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3596321‑3596215‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatgatgGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTACCGC < NC_000913/3596211‑3596113 CTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTG > 1:1123225/1‑100 TACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGA > 1:2465499/1‑100 ACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGAT > 2:2000670/1‑100 CACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATG < 2:1009912/100‑1 nCCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGCCTCATTTATGATCATCGCCGCGCTGATGA > 1:2728613/2‑100 CCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGAT > 1:506994/1‑100 CCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGAT < 2:1433339/100‑1 ATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGG < 2:1503079/100‑1 TGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGG < 1:765335/100‑1 GGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGC > 1:329111/1‑100 GGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGC > 2:2700743/1‑100 GTTTACGACATAATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTATCATTTATGATCATCGCCGCGCTGATGATGGGCA > 1:1523521/1‑100 TTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCA < 1:875544/99‑1 TTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATT < 2:529039/100‑1 TTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATT < 2:1249470/100‑1 TACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATCGGCATTG < 2:1530791/100‑1 ACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGA < 2:1592152/100‑1 ACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGA < 2:2260360/100‑1 ACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGA < 2:2703790/100‑1 ACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGA < 1:1280847/100‑1 CGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGAT < 2:1485651/100‑1 CGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGAT > 2:354930/1‑100 CGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCACTTATGATCATCGCCGCGCTGATGATGGGCATTGAT > 2:1782143/1‑100 CGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGATTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGAT > 1:1633793/1‑100 GCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATAC < 2:457269/100‑1 CATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACC < 2:1200621/100‑1 CATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACC < 2:1149029/100‑1 ATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCG < 2:956315/100‑1 TATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGC < 2:1203883/100‑1 TATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGC < 2:410399/100‑1 CGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGG < 2:249414/100‑1 GGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGC > 1:1947568/1‑100 GGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGC < 2:1048246/100‑1 TGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCT < 2:1686290/100‑1 GATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTG < 2:479875/100‑1 GATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTG > 1:1314144/1‑100 ATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGt < 1:2241554/100‑2 ATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGG > 1:460858/1‑100 TCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGT < 2:145033/100‑1 CAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTA < 1:1847217/100‑1 CAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTA < 2:1502472/100‑1 CAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTA > 2:1847243/1‑100 ACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGC < 1:354926/100‑1 ACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGC < 2:14306/100‑1 CGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCG > 2:208362/1‑100 tCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGG < 2:464432/99‑1 GCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGG > 1:1106365/1‑100 GCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGG > 1:1656379/1‑100 CCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGG > 2:1982768/1‑100 CCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGG < 1:2355207/100‑1 CCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGG < 2:549945/100‑1 gtgGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGAT < 1:1698767/97‑1 ACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCcaatca > 2:1530990/1‑94 CGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTC < 2:2243843/100‑1 CGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTC < 1:2459240/100‑1 GGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCG < 1:2472594/100‑1 GGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCG < 2:896458/100‑1 GGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCG < 1:2653311/100‑1 AGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGG < 1:1336124/100‑1 GGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGAATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGC > 1:2040170/1‑100 TATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATC > 1:2178781/1‑100 ATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCG < 2:497689/100‑1 TGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGT > 1:2074209/1‑100 GATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTC < 1:519432/100‑1 TGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATT < 2:2651150/100‑1 CAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCC > 1:1463418/1‑100 GCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAG < 2:460863/100‑1 TACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTagatcgg > 1:1145212/1‑93 TACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCG < 2:2491857/100‑1 CGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCC < 2:1344315/100‑1 CGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCC > 2:743979/1‑100 CGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCC < 2:2511720/100‑1 CGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCC > 1:745299/1‑100 GTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCG > 1:1091210/1‑97 CTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTAC > 2:369057/1‑100 TCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACG < 2:2171324/100‑1 CATTTATGATCATCGCCGCGTTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGG > 1:1778725/1‑100 CATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGG > 1:108899/1‑100 CATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGG > 1:1962145/1‑100 ATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGC > 1:1954864/1‑100 ATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGC < 1:469912/100‑1 ATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGC < 1:2244041/100‑1 TTATGCTCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTn < 2:1179724/100‑2 TTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGTTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTG < 2:2141017/100‑1 TTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTG < 2:2826298/100‑1 ATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGA > 1:1402174/1‑100 ATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGA < 2:1406200/100‑1 TGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAG > 2:1986035/1‑100 ATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTA > 2:1424590/1‑100 CATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATC < 1:2501301/100‑1 CATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATC > 1:821415/1‑100 ATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCG < 2:1683378/100‑1 ATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCG > 1:965640/1‑100 GCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAAC < 2:329978/100‑1 GCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAAC < 1:1782117/100‑1 ATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTT < 1:2262259/100‑1 ATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTT < 1:2727393/100‑1 TGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTA > 1:988903/1‑100 TGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTACCG > 2:2558407/1‑100 GGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTACCGC < 2:2562761/100‑1 GCTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3596321‑3596215‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatgatgGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTACCGC < NC_000913/3596211‑3596113 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |