| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,596,220 | (TCA)3→2 | coding (182‑184/927 nt) | livH ← | branched‑chain amino acid ABC transporter permease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3596215 = | 2 (0.020) | 103 (0.960) | 67/182 | 0.5 | 98.2% | coding (189/927 nt) | livH | branched‑chain amino acid ABC transporter permease |
| ? | NC_000913 | = 3596211 | 2 (0.020) | coding (193/927 nt) | livH | branched‑chain amino acid ABC transporter permease | |||||
Only 100 of 111 total aligned reads displayed.
GTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCAT > NC_000913/3596116‑3596313 | gcggtaagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccc < 2:2562761‑M1/1‑1 (MQ=255) cggtaagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccca > 2:2558407‑M1/99‑100 (MQ=255) gtaagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgcccatc > 2:1974258‑M1/97‑100 (MQ=255) aagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgcccatcat < 1:2727393‑M1/6‑1 (MQ=255) aagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgcccatcat < 1:2262259‑M1/6‑1 (MQ=255) cccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAgcgc < 1:2145722‑M1/12‑1 (MQ=255) gttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCgcggc < 1:1782117‑M1/15‑1 (MQ=255) gttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCgcggc < 2:329978‑M1/15‑1 (MQ=255) cgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCgat < 2:1683378‑M1/18‑1 (MQ=255) cgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCgat > 1:965640‑M1/83‑100 (MQ=255) gatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCgatg < 1:2501301‑M1/19‑1 (MQ=255) gatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCgatg > 1:821415‑M1/82‑100 (MQ=255) tactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCgatgat > 2:1424590‑M1/80‑100 (MQ=255) ctccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCa > 2:1986035‑M1/78‑100 (MQ=255) tccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCAt > 1:1402174‑M1/77‑100 (MQ=255) nagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGAGCATaa < 2:1179724‑M1/26‑1 (MQ=255) cagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATaa < 2:2826298‑M1/26‑1 (MQ=255) gccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAAt < 1:2244041‑M1/28‑1 (MQ=255) gccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAAt < 1:469912‑M1/28‑1 (MQ=255) ccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATg > 1:1962145‑M1/72‑100 (MQ=255) ccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATg > 1:108899‑M1/72‑100 (MQ=255) ccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAACGCGGCGATGATCATAAATg > 1:1778725‑M1/72‑100 (MQ=255) cgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATga < 2:2171324‑M1/30‑1 (MQ=255) gtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATgag > 1:1820384‑M1/70‑100 (MQ=255) gtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATgag > 2:369057‑M1/70‑100 (MQ=255) ggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACg < 2:1344315‑M1/34‑1 (MQ=255) ggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACg < 2:1314162‑M1/34‑1 (MQ=255) ggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACg > 2:743979‑M1/67‑100 (MQ=255) ggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACg < 2:2511720‑M1/34‑1 (MQ=255) ggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACg > 1:745299‑M1/67‑100 (MQ=255) cgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGAc > 1:1091210‑M1/65‑97 (MQ=255) cgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTa < 2:2491857‑M1/36‑1 (MQ=255) ccgatctaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTa > 1:1145212‑M1/65‑100 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCt < 2:1514794/100‑1 (MQ=255) ggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTg > 1:1463418‑M1/61‑100 (MQ=255) caatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGcc > 1:1626321‑M1/59‑100 (MQ=255) caatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGcc > 2:528650‑M1/59‑100 (MQ=255) aatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATgagacgtaagatcgg < 2:1145230‑M1/43‑8 (MQ=255) tgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAAt > 1:2717458‑M1/56‑100 (MQ=255) gacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATc < 1:519432‑M1/46‑1 (MQ=255) acgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCa > 1:2074209‑M1/54‑100 (MQ=255) cgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCat < 2:497689‑M1/48‑1 (MQ=255) tGCGACGACGAATCCCGCAGATACCAGCAGCCAGACGGCATCAATGCCC‑‑C‑TCATAAGCGCGGCGATGATCATAAATGAGCAGTAGCTGCCAATCat < 1:2034639/96‑1 (MQ=255) gattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCata > 1:2178781‑M1/52‑100 (MQ=255) gccgacgaatcccgcagctaccagcagccagccggtatcaattccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAAcc > 1:2040170‑M1/46‑100 (MQ=255) ccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCt < 1:1336124‑M1/56‑1 (MQ=255) acgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGc < 2:1433794‑M1/59‑1 (MQ=255) cgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGcc < 2:896458‑M1/60‑1 (MQ=255) cgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGcc < 1:2653311‑M1/60‑1 (MQ=255) cgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGcc < 1:2472594‑M1/60‑1 (MQ=255) gaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCg < 2:2243843‑M1/61‑1 (MQ=255) gaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCg < 1:2459240‑M1/61‑1 (MQ=255) atcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCtcgcccac < 1:1698767‑M1/63‑4 (MQ=255) tccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTggg > 1:464427‑M1/36‑100 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTggg > 2:1982768‑M1/36‑100 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTggg < 2:549945‑M1/65‑1 (MQ=255) ccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGtggga < 2:464432‑M1/66‑2 (MQ=255) ccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGc > 1:1106365‑M1/35‑100 (MQ=255) ccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGc > 1:1656379‑M1/35‑100 (MQ=255) cgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCg > 2:208362‑M1/34‑100 (MQ=255) gctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGt < 1:354926‑M1/71‑1 (MQ=255) gctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGt < 2:14306‑M1/71‑1 (MQ=255) taccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTg < 2:1502472‑M1/73‑1 (MQ=255) taccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTg > 2:1847243‑M1/28‑100 (MQ=255) taccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTg < 1:1847217‑M1/73‑1 (MQ=255) accagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGa < 2:145033‑M1/74‑1 (MQ=255) acagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGAt < 1:2241554‑M1/75‑1 (MQ=255) cagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATc > 1:2456242‑M1/25‑100 (MQ=255) cagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATc < 2:479875‑M1/76‑1 (MQ=255) cagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATc > 1:1314144‑M1/25‑100 (MQ=255) agcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCa < 2:1686290‑M1/77‑1 (MQ=255) gccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGcc > 1:1947568‑M1/20‑100 (MQ=255) gccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGcc < 2:1048246‑M1/81‑1 (MQ=255) ccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCg < 2:249414‑M1/82‑1 (MQ=255) gccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATa < 2:1203883‑M1/85‑1 (MQ=255) gccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATa < 2:410399‑M1/85‑1 (MQ=255) cggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAAt < 2:956315‑M1/87‑1 (MQ=255) ggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATg < 2:1149029‑M1/88‑1 (MQ=255) ggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATg < 2:1200621‑M1/88‑1 (MQ=255) gtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGc < 2:457269‑M1/89‑1 (MQ=255) atcaatgccCATCATCAGCGCGGCGATGATCATAAGTGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCg > 2:1782143‑M1/10‑100 (MQ=255) atcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAATCCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCg > 1:1633793‑M1/10‑100 (MQ=255) atcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCg > 2:354930‑M1/10‑100 (MQ=255) atcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCg < 2:1485651‑M1/91‑1 (MQ=255) tcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGt < 1:1280847‑M1/92‑1 (MQ=255) tcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGt < 2:2260360‑M1/92‑1 (MQ=255) tcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGt < 2:2703790‑M1/92‑1 (MQ=255) tcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGt < 2:1592152‑M1/92‑1 (MQ=255) caatgccGATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTa < 2:1530791‑M1/93‑1 (MQ=255) caatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTa < 1:128772‑M1/93‑1 (MQ=255) aatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTaa < 2:1249470‑M1/94‑1 (MQ=255) aatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTaa < 2:430729‑M1/94‑1 (MQ=255) aatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTaa < 2:529039‑M1/94‑1 (MQ=255) atgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTaaa > 2:2145749‑M1/6‑100 (MQ=255) tgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTaaa < 1:875544‑M1/95‑1 (MQ=255) tgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAAc < 1:874829‑M1/96‑1 (MQ=255) gccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAAcc > 2:2700743‑M1/4‑100 (MQ=255) gccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAAcc > 1:329111‑M1/4‑100 (MQ=255) ccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCa < 1:765335‑M1/98‑1 (MQ=255) cCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCAt < 2:1503079‑M1/99‑1 (MQ=255) | GTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCAT > NC_000913/3596116‑3596313 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |