| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,596,220 | (TCA)3→2 | coding (182‑184/927 nt) | livH ← | branched‑chain amino acid ABC transporter permease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3596215 = | 2 (0.020) | 103 (0.960) | 67/182 | 0.5 | 98.2% | coding (189/927 nt) | livH | branched‑chain amino acid ABC transporter permease |
| ? | NC_000913 | = 3596211 | 2 (0.020) | coding (193/927 nt) | livH | branched‑chain amino acid ABC transporter permease | |||||
Only 100 of 111 total aligned reads displayed.
GCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAAC > NC_000913/3596113‑3596310 | gCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCc < 2:2562761‑M2/100‑2 (MQ=255) cGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCca > 2:2558407‑M2/1‑98 (MQ=255) gTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatc > 2:1974258‑M2/1‑96 (MQ=255) aaGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcat < 1:2727393‑M2/100‑7 (MQ=255) aaGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcat < 1:2262259‑M2/100‑7 (MQ=255) cccGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgc < 1:2145722‑M2/100‑13 (MQ=255) gTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggc < 1:1782117‑M2/100‑16 (MQ=255) gTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggc < 2:329978‑M2/100‑16 (MQ=255) cGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgat < 2:1683378‑M2/100‑19 (MQ=255) cGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgat > 1:965640‑M2/1‑82 (MQ=255) gATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatg < 1:2501301‑M2/100‑20 (MQ=255) gATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatg > 1:821415‑M2/1‑81 (MQ=255) tACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgat > 2:1424590‑M2/1‑79 (MQ=255) cTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatca > 2:1986035‑M2/1‑77 (MQ=255) tCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcat > 1:1402174‑M2/1‑76 (MQ=255) nagCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgagcataa < 2:1179724‑M2/99‑27 (MQ=255) cAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataa < 2:2826298‑M2/100‑27 (MQ=255) gCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaat < 1:2244041‑M2/100‑29 (MQ=255) gCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaat < 1:469912‑M2/100‑29 (MQ=255) ccGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatg > 1:1962145‑M2/1‑71 (MQ=255) ccGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatg > 1:108899‑M2/1‑71 (MQ=255) ccGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcaacgcggcgatgatcataaatg > 1:1778725‑M2/1‑71 (MQ=255) cGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatga < 2:2171324‑M2/100‑31 (MQ=255) gTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgag > 1:1820384‑M2/1‑69 (MQ=255) gTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgag > 2:369057‑M2/1‑69 (MQ=255) ggCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacg < 2:1344315‑M2/100‑35 (MQ=255) ggCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacg < 2:1314162‑M2/100‑35 (MQ=255) ggCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacg > 2:743979‑M2/1‑66 (MQ=255) ggCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacg < 2:2511720‑M2/100‑35 (MQ=255) ggCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacg > 1:745299‑M2/1‑66 (MQ=255) cgcTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgta < 2:2491857‑M2/100‑37 (MQ=255) cgcTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagac > 1:1091210‑M2/1‑64 (MQ=255) ccgatctaatgacgatTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgta > 1:1145212‑M2/8‑64 (MQ=255) ggCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctg > 1:1463418‑M2/1‑60 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgcc > 1:1626321‑M2/1‑58 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgcc > 2:528650‑M2/1‑58 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCt < 2:1514794/100‑1 (MQ=255) aaTGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtaagatcgg < 2:1145230‑M2/100‑44 (MQ=255) tGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaat > 1:2717458‑M2/1‑55 (MQ=255) gACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatc < 1:519432‑M2/100‑47 (MQ=255) aCGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatca > 1:2074209‑M2/1‑53 (MQ=255) cGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcat < 2:497689‑M2/100‑49 (MQ=255) gATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcata > 1:2178781‑M2/1‑51 (MQ=255) tGCGACGACGAATCCCGCAGATACCAGCAGCCAGACGGCATCAATGCCC‑‑C‑TCATAAGCGCGGCGATGATCATAAATGAGCAGTAGCTGCCAATCat < 1:2034639/96‑1 (MQ=255) gcCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATTCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacc > 1:2040170‑M2/1‑45 (MQ=255) ccGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacct < 1:1336124‑M2/100‑57 (MQ=255) acgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgc < 2:1433794‑M2/100‑60 (MQ=255) cgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgcc < 1:2653311‑M2/100‑61 (MQ=255) cgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgcc < 2:896458‑M2/100‑61 (MQ=255) cgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgcc < 1:2472594‑M2/100‑61 (MQ=255) gaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccg < 1:2459240‑M2/100‑62 (MQ=255) gaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccg < 2:2243843‑M2/100‑62 (MQ=255) aTCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgcccac < 1:1698767‑M2/100‑64 (MQ=255) tccgCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtggg > 1:464427‑M2/2‑35 (MQ=255) cccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtggg > 2:1982768‑M2/1‑35 (MQ=255) cccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtggg < 2:549945‑M2/100‑66 (MQ=255) ccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggc > 1:1106365‑M2/1‑34 (MQ=255) ccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggc > 1:1656379‑M2/1‑34 (MQ=255) ccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtggga < 2:464432‑M2/100‑67 (MQ=255) cGCAGCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcg > 2:208362‑M2/1‑33 (MQ=255) gCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagt < 2:14306‑M2/100‑72 (MQ=255) gCTACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagt < 1:354926‑M2/100‑72 (MQ=255) tACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttg > 2:1847243‑M2/1‑27 (MQ=255) tACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttg < 1:1847217‑M2/100‑74 (MQ=255) tACCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttg < 2:1502472‑M2/100‑74 (MQ=255) aCCAGCAGCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttga < 2:145033‑M2/100‑75 (MQ=255) acagcagcCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgat < 1:2241554‑M2/99‑76 (MQ=255) cagcagCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatc > 1:1314144‑M2/1‑24 (MQ=255) cagcagCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatc < 2:479875‑M2/100‑77 (MQ=255) cagcagCCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatc > 1:2456242‑M2/1‑24 (MQ=255) agcagcCAGCCGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatca < 2:1686290‑M2/100‑78 (MQ=255) gccagccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgcc > 1:1947568‑M2/1‑19 (MQ=255) gccagccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgcc < 2:1048246‑M2/100‑82 (MQ=255) ccagccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccg < 2:249414‑M2/100‑83 (MQ=255) gccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgata < 2:1203883‑M2/100‑86 (MQ=255) gccGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgata < 2:410399‑M2/100‑86 (MQ=255) cGGTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataat < 2:956315‑M2/100‑88 (MQ=255) ggTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatg < 2:1149029‑M2/100‑89 (MQ=255) ggTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatg < 2:1200621‑M2/100‑89 (MQ=255) gTATCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgc < 2:457269‑M2/100‑90 (MQ=255) aTCAATGCCcatcatcagcgcggcgatgatcataagtgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccg > 2:1782143‑M2/1‑9 (MQ=255) aTCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataatcctcgccgtgggcgaagttgatcatgccgataatgccg > 1:1633793‑M2/1‑9 (MQ=255) aTCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccg > 2:354930‑M2/1‑9 (MQ=255) aTCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccg < 2:1485651‑M2/100‑92 (MQ=255) tCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgt < 1:1280847‑M2/100‑93 (MQ=255) tCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgt < 2:2260360‑M2/100‑93 (MQ=255) tCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgt < 2:2703790‑M2/100‑93 (MQ=255) tCAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgt < 2:1592152‑M2/100‑93 (MQ=255) cAATGCCgatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgta < 2:1530791‑M2/100‑94 (MQ=255) cAATGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgta < 1:128772‑M2/100‑94 (MQ=255) aaTGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaa < 2:1249470‑M2/100‑95 (MQ=255) aaTGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaa < 2:430729‑M2/100‑95 (MQ=255) aaTGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaa < 2:529039‑M2/100‑95 (MQ=255) aTGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaa > 2:2145749‑M2/1‑5 (MQ=255) tGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaac < 1:874829‑M2/100‑97 (MQ=255) tGCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaa < 1:875544‑M2/99‑96 (MQ=255) gCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaacc > 2:2700743‑M2/1‑3 (MQ=255) gCCcatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaacc > 1:329111‑M2/1‑3 (MQ=255) cccatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaacca < 1:765335‑M2/100‑99 (MQ=255) ccatcatcagcgcggcgatgatcataaatgagacgtagctgccaatcatataaacctcgccgtgggcgaagttgatcatgccgataatgccgtaaaccat < 2:1503079‑M2/100‑100 (MQ=255) | GCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAAC > NC_000913/3596113‑3596310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |