New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4415961NA (NA)14 (0.160) 9/166 NT NA noncoding (4/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4415991 NA (NA)noncoding (34/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 151 total aligned reads displayed.

GATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCT  >  NC_000913/4415862‑4416060
                                                                                                   |                                                                                                   
gATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAg                                                                                                     >  2:846341/1‑100 (MQ=255)
gATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAg                                                                                                     <  2:444671/100‑1 (MQ=255)
  tttATTGCTGCGTGCGACGGGGGGAGTGTGTGTGTAAGCGTAAACGACTGATGCGACCCTGGTTTCGATTCACTAAATGAAATATGTGAAAATTGTAGgc                                                                                                   <  2:1574990‑M1/100‑3 (MQ=255)
   ttATTGGTGCGGGCGACGTGGGGAGTGTTTTTGTAAATGTATATGACTGTTGCGACGCTGGTTTCGATTAAATAAATGAAATATGTTAAAATTGTAGGcc                                                                                                  <  2:1370228/100‑1 (MQ=255)
    tATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccg                                                                                                 >  1:129519‑M1/1‑96 (MQ=255)
     aTTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccgg                                                                                                <  2:121934‑M1/100‑6 (MQ=255)
     aTTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccgg                                                                                                <  1:765283‑M1/100‑6 (MQ=255)
         ctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACaa                                                                                            >  1:1403127/1‑100 (MQ=255)
          tgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAg                                                                                           >  2:2286267/1‑100 (MQ=255)
           gcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg                                                                                          <  2:352970/100‑1 (MQ=255)
           gcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg                                                                                          <  2:2410283/100‑1 (MQ=255)
            cGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgc                                                                                         >  2:1807796/1‑100 (MQ=255)
                cGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc                                                                                     >  1:1164118/1‑100 (MQ=255)
                cGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc                                                                                     <  1:1350941/100‑1 (MQ=255)
                 gACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcg                                                                                    <  1:416951/100‑1 (MQ=255)
                 gACGGGGGGAGTGTGCGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgag                                                                                    <  1:2568735‑M1/100‑18 (MQ=255)
                   cGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcgcg                                                                                  >  1:1306931/1‑100 (MQ=255)
                   cGGGGGGAGTGTGTGTGTAAACGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgcg                                                                                        >  2:2121794/1‑94 (MQ=255)
                      ggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGCAAATTGTAGGCCGGACATGGCGCTCGcgccg                                                                               <  1:1757206/100‑1 (MQ=255)
                        ggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCa                                                                             <  1:749717/100‑1 (MQ=255)
                              tgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggc                                                                       <  1:1562515‑M1/100‑31 (MQ=255)
                              tgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggc                                                                       <  1:1238372‑M1/100‑31 (MQ=255)
                              tgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggc                                                                       <  1:467453‑M1/100‑31 (MQ=255)
                              tgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGC                                                                       <  2:197050‑M2/100‑1 (MQ=255)
                              tgtgtgtAAGCGTATACGACTGATGCGACGCGGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttggccggc                                                                       <  1:2013232‑M1/100‑31 (MQ=255)
                                tgtgtAAGCGTATACGACTGATGCGAAGCTGGTTTCGAATAACTAAATGAAATATGTGAAAATTGTAAGCAGGACAAGGCGCTAGCGCCGCATACAGCAt                                                                     >  2:449549/1‑100 (MQ=255)
                                  tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGATATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                   <  2:811688/100‑1 (MQ=255)
                                  tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggcctac                                                                   <  1:2018371‑M1/100‑35 (MQ=255)
                                  tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                   <  1:1074302/100‑1 (MQ=255)
                                  tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                   <  2:2587489/100‑1 (MQ=255)
                                  tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                   <  1:2462801/100‑1 (MQ=255)
                                  tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                   >  1:1312690/1‑100 (MQ=255)
                                   gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                   <  1:954173/99‑1 (MQ=255)
                                   gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGt                                                                  <  2:428891/100‑1 (MQ=255)
                                   gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGt                                                                  >  1:241625/1‑100 (MQ=255)
                                   gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGt                                                                  >  2:1581249/1‑100 (MQ=255)
                                    tAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggcctacaa                                                                 <  2:1203789‑M1/100‑37 (MQ=255)
                                     aaGCGTATACGACTGTTGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc                                                                <  1:2558674/100‑1 (MQ=255)
                                     aaGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggcctacaat                                                                <  2:1974221‑M1/100‑38 (MQ=255)
                                      aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                 >  2:1578473/1‑98 (MQ=255)
                                      aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                               <  2:2120595/100‑1 (MQ=255)
                                      aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                               >  1:1803776/1‑100 (MQ=255)
                                        cGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAtt                                                             <  1:1009093/100‑1 (MQ=255)
                                          tataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTg                                                           <  1:2051893/100‑1 (MQ=255)
                                           ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                          >  1:550597/1‑100 (MQ=255)
                                           ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                          <  2:2257811/100‑1 (MQ=255)
                                            taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                         <  2:1459300/100‑1 (MQ=255)
                                            taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                         <  2:2450214/100‑1 (MQ=255)
                                            taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                         <  1:1743104/100‑1 (MQ=255)
                                            ccgatcTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                         <  2:2034581/95‑1 (MQ=255)
                                             aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggcctacaattttcacat                                                        <  1:1296398‑M1/100‑46 (MQ=255)
                                             aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                        <  2:408024/100‑1 (MQ=255)
                                              cGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGt                                                       >  1:192271/1‑100 (MQ=255)
                                                aCTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAg                                                     <  2:132233/100‑1 (MQ=255)
                                                 cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                    <  2:291875/100‑1 (MQ=255)
                                                 cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                    >  2:2535120/1‑100 (MQ=255)
                                                  tGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGAt                                                   <  1:361381/100‑1 (MQ=255)
                                                   gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCtagatcgg                                                  >  1:2034592/1‑93 (MQ=255)
                                                    aTGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGa                                                 >  2:732536/1‑100 (MQ=255)
                                                     tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGa                                                 <  1:615332/99‑1 (MQ=255)
                                                     tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATCGTAGgccggatgcggcgcgagcgccttgtccggcctacaattttcacatatttcat                                                 <  2:1663391‑M1/99‑53 (MQ=255)
                                                      gCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGaca                                               >  2:726354/1‑100 (MQ=255)
                                                      gCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGaca                                               <  1:246039/100‑1 (MQ=255)
                                                        gACGCTGGCTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCCTTGTTCATTTGCTGTAGACGACACt                                             >  1:1245466/1‑100 (MQ=255)
                                                          cGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCa                                           >  1:1708418/1‑100 (MQ=255)
                                                            cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                         <  2:1820068/100‑1 (MQ=255)
                                                            cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                         <  2:2010167/100‑1 (MQ=255)
                                                            cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                         <  1:1581258/100‑1 (MQ=255)
                                                            cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                         >  2:703950/1‑100 (MQ=255)
                                                             tGGTTTCGATTAACTAAATGAAATATGGGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                        <  1:838943/100‑1 (MQ=255)
                                                               gTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCAt                                      <  1:1113885/100‑1 (MQ=255)
                                                                tttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATa                                     <  2:1450825/100‑1 (MQ=255)
                                                                 ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                    <  1:823436/100‑1 (MQ=255)
                                                                 ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                    <  2:2482260/100‑1 (MQ=255)
                                                                   cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                  <  2:477193/100‑1 (MQ=255)
                                                                   cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                  >  2:1279129/1‑100 (MQ=255)
                                                                    gATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGt                                 <  2:1403120/100‑1 (MQ=255)
                                                                       tAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTGCATTTGCTGTAGATGACACACATGCATACAGTATc                              >  2:594269/1‑100 (MQ=255)
                                                                        aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                             >  1:2191963/1‑100 (MQ=255)
                                                                        aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                             >  1:2298769/1‑100 (MQ=255)
                                                                        aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                             <  1:1746414/100‑1 (MQ=255)
                                                                          cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                           <  1:2535133/100‑1 (MQ=255)
                                                                            aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                         >  2:124996/1‑100 (MQ=255)
                                                                            aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCAGGCATACAGTATCGCCTg                         >  2:673151/1‑100 (MQ=255)
                                                                              aTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacgattttcacatatttcatttagttaatcgaaaccagcgtcgca                        <  2:1663391‑M2/99‑48 (MQ=255)
                                                                                gAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcg                     >  1:1955148/1‑100 (MQ=255)
                                                                                gAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcg                     >  1:2412828/1‑100 (MQ=255)
                                                                                gAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcg                     >  1:1174205/1‑100 (MQ=255)
                                                                                 aaaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgc                    >  1:1111345/1‑100 (MQ=255)
                                                                                  aaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGGATCGCCTGTAcgcg                   >  1:1686785/1‑100 (MQ=255)
                                                                                      tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg               >  1:2337447/1‑100 (MQ=255)
                                                                                      tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg               >  1:1440939/1‑100 (MQ=255)
                                                                                       gtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGt              >  2:2459895/1‑100 (MQ=255)
                                                                                         gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa            >  2:1355371/1‑100 (MQ=255)
                                                                                           aaaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATc          >  1:783634/1‑100 (MQ=255)
                                                                                             aTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgctt        <  1:1334037‑M2/100‑64 (MQ=255)
                                                                                             aTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAg        >  2:1209340/1‑100 (MQ=255)
                                                                                              ttGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAgg       <  1:2083425/100‑1 (MQ=255)
                                                                                                  aGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacaca   <  2:1566674‑M2/100‑69 (MQ=255)
                                                                                                   ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct  >  2:524014/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCT  >  NC_000913/4415862‑4416060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.