New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4415961NA (NA)14 (0.160) 9/166 NT NA noncoding (4/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4415991 NA (NA)noncoding (34/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 158 total aligned reads displayed.

TGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTAC  >  NC_000913/4415892‑4416089
                                                                                                   |                                                                                                  
tgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGC                                                                                                    <  2:197050‑M2/100‑1 (MQ=255)
cagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGc                                                                                                    >  1:1427700‑M1/71‑100 (MQ=255)
 gtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCa                                                                                                   >  1:2082151/1‑100 (MQ=255)
  gcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGc                                                                                                    >  2:1577784‑M1/69‑98 (MQ=255)
   gtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATCGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                                                 >  1:385893/1‑100 (MQ=255)
    tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGATATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                                                <  2:811688/100‑1 (MQ=255)
    tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                                                >  2:461600/1‑100 (MQ=255)
    tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                                                <  1:2462801/100‑1 (MQ=255)
    tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                                                >  1:1312690/1‑100 (MQ=255)
    tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                                                <  2:2587489/100‑1 (MQ=255)
    tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                                                <  1:1074302/100‑1 (MQ=255)
     gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGt                                                                                               <  2:428891/100‑1 (MQ=255)
     gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGt                                                                                               >  1:241625/1‑100 (MQ=255)
       ctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                                              >  1:1277880‑M1/64‑99 (MQ=255)
       ctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc                                                                                             >  2:469182‑M1/64‑100 (MQ=255)
        aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                                              >  2:1578473/1‑98 (MQ=255)
        aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                                            >  1:1803776/1‑100 (MQ=255)
        aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                                            <  2:2120595/100‑1 (MQ=255)
          cGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAtt                                                                                          <  1:1009093/100‑1 (MQ=255)
            tataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTg                                                                                        <  1:2051893/100‑1 (MQ=255)
             ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                                                       <  2:2257811/100‑1 (MQ=255)
             ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                                                       >  1:550597/1‑100 (MQ=255)
              tactgcTGATGCCGCGCTGGTGTCGATTAACGAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                      <  2:2450222/95‑1 (MQ=37)
              taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                      <  1:1743104/100‑1 (MQ=255)
              taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                      <  2:2450214/100‑1 (MQ=255)
              taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                      <  2:1459300/100‑1 (MQ=255)
              ccgatcTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                      <  2:2034581/95‑1 (MQ=255)
                  aCTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAg                                                                                  <  2:132233/100‑1 (MQ=255)
                   cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                                                 <  2:291875/100‑1 (MQ=255)
                     gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCtagatcgg                                                                               >  1:2034592/1‑93 (MQ=255)
                      aTGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGa                                                                              >  2:732536/1‑100 (MQ=255)
                       tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                                             <  2:437428/100‑1 (MQ=255)
                       tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGa                                                                              <  1:615332/99‑1 (MQ=255)
                        gCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGaca                                                                            <  1:246039/100‑1 (MQ=255)
                          gACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGacac                                                                           <  2:2402773/99‑1 (MQ=255)
                          gACGCTGGTGTGGATTAACAAAATGAAATACGTGAAAAGTGTAGGCCGGACAAGGCACTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGacac                                                                           <  2:898115/99‑1 (MQ=37)
                          gACGCTGGCTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCCTTGTTCATTTGCTGTAGACGACACt                                                                          >  1:1245466/1‑100 (MQ=255)
                              cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                                                      <  1:1581258/100‑1 (MQ=255)
                              cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                                                      <  2:1820068/100‑1 (MQ=255)
                              cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                                                      <  2:2010167/100‑1 (MQ=255)
                              cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                                                      >  2:703950/1‑100 (MQ=255)
                               tGGTTTCGATTAACTAAATGAAATATGGGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                                                     <  1:838943/100‑1 (MQ=255)
                                 gTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCAt                                                                   <  1:1113885/100‑1 (MQ=255)
                                   ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                                                 <  1:171905/100‑1 (MQ=255)
                                   ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                                                 <  2:2482260/100‑1 (MQ=255)
                                   ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                                                 <  1:823436/100‑1 (MQ=255)
                                     cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTGCATTTGCTGTAGATGACTCTCATGCATActg                                                               <  1:1756763/100‑3 (MQ=255)
                                      gATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGt                                                              <  2:1403120/100‑1 (MQ=255)
                                         tAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTGCATTTGCTGTAGATGACACACATGCATACAGTATc                                                           >  2:594269/1‑100 (MQ=255)
                                          aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                                                          >  1:2298769/1‑100 (MQ=255)
                                          aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                                                          >  1:2191963/1‑100 (MQ=255)
                                          aaCTAAATGAAATATCTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                                                          <  1:2562463/100‑1 (MQ=255)
                                           aCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGc                                                         >  1:2395578/1‑100 (MQ=255)
                                            cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                                                        <  1:2535133/100‑1 (MQ=255)
                                              aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                                                      >  2:124996/1‑100 (MQ=255)
                                              aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCAGGCATACAGTATCGCCTg                                                      >  2:673151/1‑100 (MQ=255)
                                                aTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacgattttcacatatttcatttagttaatcgaaaccagcgtcgca                                                     <  2:1663391‑M2/99‑48 (MQ=255)
                                                aTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTa                                                    <  1:123485/100‑1 (MQ=255)
                                                  gAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcg                                                  >  1:1174205/1‑100 (MQ=255)
                                                  gAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcg                                                  >  1:2412828/1‑100 (MQ=255)
                                                  gAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcg                                                  >  1:1955148/1‑100 (MQ=255)
                                                   aaaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgc                                                 >  1:1111345/1‑100 (MQ=255)
                                                    aaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGGATCGCCTGTAcgcg                                                >  1:1686785/1‑100 (MQ=255)
                                                     atatGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACgcgc                                               <  2:732374/100‑1 (MQ=255)
                                                        tgtgAAAATTGTGGGCCGTACAAGGCACTCGCGCTGCATCCGGCATTGTTCATTTGCTGTAGCTGACACTCATGTATACAGTATCGCCTGTAcgcg                                                <  2:1641405/96‑1 (MQ=255)
                                                        tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                            >  1:1440939/1‑100 (MQ=255)
                                                        tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                            >  1:2337447/1‑100 (MQ=255)
                                                          tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTGCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                            >  2:2534150/1‑98 (MQ=255)
                                                             aaaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATc                                       >  1:783634/1‑100 (MQ=255)
                                                               aTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgctt                                     <  1:1334037‑M2/100‑64 (MQ=255)
                                                               aTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAg                                     >  2:1209340/1‑100 (MQ=255)
                                                                   tAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctg                                 <  2:1312684/100‑1 (MQ=255)
                                                                    aGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacaca                                <  2:1566674‑M2/100‑69 (MQ=255)
                                                                     ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct                               >  2:524014/1‑100 (MQ=255)
                                                                      gCCGGCCAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaacccgcgtcgcatcagtcgtatacgcttacacaca                              <  1:2013232‑M2/100‑71 (MQ=255)
                                                                      gCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacaca                              <  1:467453‑M2/100‑71 (MQ=255)
                                                                      GCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGctgctg                              >  2:1275433‑M1/1‑100 (MQ=255)
                                                                        CGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTgg                             >  2:385889‑M1/1‑99 (MQ=255)
                                                                        CGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGt                            <  1:1877366‑M1/100‑1 (MQ=255)
                                                                         ggACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacacacac                           <  1:1667851‑M2/100‑74 (MQ=255)
                                                                         GGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTc                           <  1:2158275‑M1/100‑1 (MQ=255)
                                                                         GGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTc                           >  2:1517678‑M1/1‑100 (MQ=255)
                                                                         GGACAAGGCGCGCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTc                           >  2:410219‑M1/1‑100 (MQ=255)
                                                                          GACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCt                          <  2:544858‑M1/100‑1 (MQ=255)
                                                                              aGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGt                      >  1:18368/1‑100 (MQ=255)
                                                                              aGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGt                      >  1:915226/1‑100 (MQ=255)
                                                                               ggCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTa                     >  2:1872854/1‑100 (MQ=255)
                                                                               ggCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGGAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTa                     >  2:385420/1‑100 (MQ=255)
                                                                                 cgcgcgcgCCGCATCGGGAATTGTTCACGTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACa                   <  2:1584083/100‑1 (MQ=255)
                                                                                 cgcTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATCCAGTATCGCCTGTACGCGCCCGTTATCAGGCTGCTGGTCTTCGTACa                   >  2:1011096/1‑100 (MQ=255)
                                                                                 cgcTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCGGTTATCAGGCTGCTGGTCTTCGTACa                   <  2:780093/100‑1 (MQ=255)
                                                                                   cTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacgcacactccccccgtc                 <  1:2568735‑M2/100‑84 (MQ=255)
                                                                                       cgccgcATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGtaa             <  2:2158263/100‑1 (MQ=255)
                                                                                         ccgcATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGtaata           <  1:1807805/100‑1 (MQ=255)
                                                                                          cgcATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGtaataa          <  2:2294478/100‑1 (MQ=255)
                                                                                               ccGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacacacactccccccgtcgcccgcagcaat     <  1:765283‑M2/100‑96 (MQ=255)
                                                                                               ccGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacacacactccccccgtcgcccgcagcaat     <  2:121934‑M2/100‑96 (MQ=255)
                                                                                                cGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacacacactccccccgtcgcccgcagcaata    >  1:129519‑M2/1‑4 (MQ=255)
                                                                                                  gCctacaattttcacatatttcatttagtgaatcgaaaccagggtcgcatcagtcgtttacgcttacacacacactccccccgtcgcacgcagcaataaa  <  2:1574990‑M2/100‑99 (MQ=255)
                                                                                                   cctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacacacactccccccgtcgcccgcagcaataaa  <  2:2599342‑M2/99‑99 (MQ=255)
                                                                                                   |                                                                                                  
TGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTAC  >  NC_000913/4415892‑4416089

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.