| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 380,020 | (G)10→7 | intergenic (‑139/+47) | frmR ← / ← yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 380016 = | 2 (0.030) | 65 (0.940) | 49/184 | 0.5 | 97.1% | intergenic (‑135/+53) | frmR/yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| ? | NC_000913 | = 380012 | 2 (0.030) | intergenic (‑131/+57) | frmR/yaiO | regulator protein that represses frmRAB operon/outer membrane protein | |||||
GGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAAT > NC_000913/379917‑380115 | taggggggtattctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaag < 2:81239‑M1/1‑1 (MQ=255) aggggggtattctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaagg < 1:753044‑M1/2‑1 (MQ=255) ggggggtattctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaggg < 2:720197‑M1/3‑1 (MQ=255) ggggggtattctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaggg < 1:34742‑M1/3‑1 (MQ=255) ggggtattctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaagggg < 2:951447‑M1/4‑1 (MQ=255) ggggtattctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaagaggg < 2:785373‑M1/5‑1 (MQ=255) gggtattctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaagggggg < 2:1779983‑M1/6‑1 (MQ=255) gtattctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGc < 2:1235422‑M1/8‑1 (MQ=255) tattctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCt > 2:1481123‑M1/92‑100 (MQ=255) tattctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCt > 2:770518‑M1/92‑100 (MQ=255) tattctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCt < 2:2588‑M1/9‑1 (MQ=255) attctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTa < 1:1234098‑M1/10‑1 (MQ=255) attctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTa < 1:612625‑M1/10‑1 (MQ=255) tctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAAt < 2:980252‑M1/12‑1 (MQ=255) ctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATc > 1:1779970‑M1/88‑100 (MQ=255) ctatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcgaaaaacaaagaggaaaGGAGGGGCTAATc < 2:516169‑M1/13‑1 (MQ=255) tatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatggggtcgtaaaacaaagaggaaaGGGGGGGCTAATCg < 1:97818‑M1/14‑1 (MQ=255) ccgatctatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGc > 2:490422‑M1/85‑100 (MQ=255) tgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAg < 1:1052999‑M1/18‑1 (MQ=255) tccgatcttacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAggg > 1:1610626‑M1/81‑100 (MQ=255) tagaatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAg > 2:1653013‑M1/78‑100 (MQ=255) atgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATcggcagatcgg < 1:490419‑M1/23‑6 (MQ=255) gcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGgc > 1:1331375‑M1/76‑100 (MQ=255) catacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGgcc > 1:742334‑M1/75‑100 (MQ=255) ccccccTATAGTATATAACACTGGCGAATAGAAGTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑‑GAGGGATCTAATCGGCAGGGAAGCCAGccc > 1:1197263/1‑100 (MQ=255) atacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGgccg < 1:1704657‑M1/27‑1 (MQ=255) tacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcgggaaccaaagacgaaaGGGGGGGCTAATCGGCAGGGAAGgccgc < 1:1273717‑M1/28‑1 (MQ=255) tacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCggcagggagatcgga < 2:1610637‑M1/28‑8 (MQ=255) tacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGgccgc > 2:725816‑M1/73‑100 (MQ=255) accccgctatagtatataacactggagaataagatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGgccgcc > 2:903159‑M1/72‑100 (MQ=255) cccccctatagtatataacactggagaatataagttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGTAAGGCCGccc < 1:1197258‑M1/30‑1 (MQ=255) cccccctatagtatataacactggagaatagaagttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGccc < 1:1197264‑M1/30‑1 (MQ=255) cccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGccc < 1:839369‑M1/30‑1 (MQ=255) cccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGCGCTAATCGGCAGGGAAGGCCGccc < 1:67473‑M1/30‑1 (MQ=255) cccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCg < 2:1375573‑M1/32‑1 (MQ=255) atagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAg > 1:1448395‑M1/64‑100 (MQ=255) atagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAg > 1:2588‑M1/64‑100 (MQ=255) atagtataaaacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAg < 1:271302‑M1/37‑1 (MQ=255) tatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg > 1:1597915‑M1/60‑100 (MQ=255) tatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg > 1:30590‑M1/60‑100 (MQ=255) tataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcg > 2:358139‑M1/58‑100 (MQ=255) ataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcgg > 1:760343‑M1/57‑100 (MQ=255) ataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcgg > 2:141732‑M1/57‑100 (MQ=255) ataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcgg < 1:449972‑M1/44‑1 (MQ=255) taacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGggcggc > 2:244455‑M1/56‑100 (MQ=255) taacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAAACCGCCCCGGATa < 2:248211‑M1/36‑1 (MQ=255) aacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCa > 1:897832‑M1/55‑100 (MQ=255) actggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAg > 1:1778060‑M1/52‑98 (MQ=255) tggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGa > 2:433152‑M1/50‑97 (MQ=255) ngagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCACGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGa < 1:956559‑M1/52‑1 (MQ=255) aataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGAGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCa < 1:223613‑M1/56‑1 (MQ=255) ataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAg < 2:1098010‑M1/57‑1 (MQ=255) taaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGa > 2:34742‑M1/43‑100 (MQ=255) aaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGaa > 2:198698‑M1/42‑100 (MQ=255) aaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGaa < 2:282747‑M1/59‑1 (MQ=255) aaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGACTCAGAAt < 1:1704253‑M1/60‑1 (MQ=255) aaatttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGAATAGCGGGCGGCAGAAGGAATCAGAAt < 2:748992‑M1/60‑1 (MQ=255) ccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGt < 1:492755‑M1/68‑1 (MQ=255) cggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTc < 2:1484988‑M1/69‑1 (MQ=255) cggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTc > 2:1684715‑M1/32‑100 (MQ=255) gaatgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGAc < 1:1364784‑M1/73‑1 (MQ=255) tgtggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACggg < 2:327432‑M1/76‑1 (MQ=255) tCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt > 2:915829/1‑100 (MQ=255) ggtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg < 2:1148906‑M1/79‑1 (MQ=255) gtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc < 1:1296538‑M1/80‑1 (MQ=255) gtcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc > 2:1273728‑M1/21‑100 (MQ=255) tcggaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCa < 2:1112491‑M1/81‑1 (MQ=255) gaaaacaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCGGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGt < 1:994289‑M1/84‑1 (MQ=255) acaaagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 1:19541‑M1/13‑100 (MQ=255) caaagaggaaaGAGGAAACTAATCGGCAGGGAAAGCCGCCCCGGATAGCGGGCGGCAAAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAg < 1:35736‑M1/89‑1 (MQ=255) agagaggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGttgta > 2:1234109‑M1/11‑96 (MQ=255) ggggagggggggCTAATCGGCAGGGAAGGCGGCCCCGGATAGCGGGCGGCAGAAGGAAGCAGAATTTCCAGGTCAGACGGTCTGCAACTTGCAGCCCGtc < 2:1042968/95‑2 (MQ=255) ggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGGCGGGCTGCAAGTTGCAGACCGtt < 2:190781‑M1/95‑1 (MQ=255) ggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGtt < 2:711189‑M1/95‑1 (MQ=255) ggaaaGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGtt < 2:1161078‑M1/95‑1 (MQ=255) GGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAat > 2:926133‑M1/1‑100 (MQ=255) | GGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAAT > NC_000913/379917‑380115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |