New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2232736 =NA (NA)4 (0.050) 3/166 NT NA noncoding (1/34 nt) REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2232766 = NA (NA)noncoding (31/34 nt) REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 105 total aligned reads displayed.

AGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGT  >  NC_000913/2232638‑2232835
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ctaaggaaaatttccatcaggctactttacccgctggttttgcgcaagaaacggcaaactgtttgccgggaatttcgacaccaggagagggatggcaaGc                                                                                                    <  1:1305597‑M1/2‑1 (MQ=255)
 ggcGATGCGCCGTTGATTCAGTGGGATGAAACCTCCGCAGCGCGGAAAGCTGTCGTCTGTCACAGTATCGACCGAGTGCATCTCGCTTAAGCCTGGTGc                                                                                                    <  2:2196252/97‑1 (MQ=255)
  ccGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCg                                                                                                  <  2:1972439/100‑1 (MQ=255)
  aaggaaaatttccatcaggctactttacccgctggttttgcgcaagaaacggcaaactgtttgccgggaatttcgacaccaggagagggctggcaaGCCg                                                                                                  >  1:973192‑M1/97‑100 (MQ=255)
  aaggaaaatttccatcaggctactttacccgctggttttgcgcaagaaacggcaaactgtttgccgggaatttcgacaccaggagagggctggcaaGCCg                                                                                                  >  2:832220‑M1/97‑100 (MQ=255)
  aaggaaaatttccatcaggctactttacccgctggttttgcgcaagaaacggcaaactgtttgccgggaatttcgacaccaggagagggctggcaaGCCg                                                                                                  <  2:1116663‑M1/4‑1 (MQ=255)
   aggaaaattttcatcaggctactttacccgctggttttgcgcaagaaacggcaaactgtttgccggtaagttcgacaccaggagagggctggcaaGCCgg                                                                                                 >  2:1475511‑M1/96‑100 (MQ=255)
    ggaaaatttccatcaggctactttacccgctggttttgcgcaagaaacggcaaactgtttgccgggaatttcgacaccaggagagggctggcaaGCCGGa                                                                                                <  2:1936017‑M1/6‑1 (MQ=255)
    gATGCGCCGTTGATGCAGTGGGAGGCCACCTCCGCAACGCTGAAAGATCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGa                                                                                                <  1:518906/100‑1 (MQ=255)
     aTGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGAt                                                                                               <  1:2202256/100‑1 (MQ=255)
        cgcCATTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATgcg                                                                                            >  1:1116666/1‑100 (MQ=255)
         gcCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCAAAGTATCGACCGAGTGCTTCTCGCTTAAGTCTGGTGCCGGATgcgg                                                                                           >  2:1331582/1‑100 (MQ=255)
          ccGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATgcggc                                                                                          <  2:590825/100‑1 (MQ=255)
           cGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATgcggcg                                                                                         <  1:618278/100‑1 (MQ=255)
             ttGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTg                                                                                       <  2:168071/100‑1 (MQ=255)
             ttGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTg                                                                                       <  1:2184097/100‑1 (MQ=255)
              tGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGa                                                                                      <  2:577884/100‑1 (MQ=255)
                aTTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGCTGCGGCGTGAAc                                                                                    >  1:1394702/1‑100 (MQ=255)
                aTTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAAc                                                                                    >  2:54551/1‑100 (MQ=255)
                 ttCAGTGGGATGCCACCTCCGCCACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACg                                                                                   >  2:1299448/1‑100 (MQ=255)
                 ttCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACg                                                                                   <  1:401117/100‑1 (MQ=255)
                 ttCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACg                                                                                   >  1:1991822/1‑100 (MQ=255)
                 ttCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACg                                                                                   <  1:1251683/100‑1 (MQ=255)
                 ttCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACg                                                                                   <  2:1019502/100‑1 (MQ=255)
                 ttCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACg                                                                                   >  2:952234/1‑100 (MQ=255)
                 ttCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGCATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCCGCGTGAACg                                                                                   >  2:1583413/1‑100 (MQ=255)
                   cAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCGCAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGcc                                                                                 <  2:1430954/100‑1 (MQ=255)
                   cAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGcc                                                                                 <  2:1009099/100‑1 (MQ=255)
                   cAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGcc                                                                                 >  2:1589281/1‑100 (MQ=255)
                   cAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGcc                                                                                 >  1:1297340/1‑100 (MQ=255)
                   cAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGc                                                                                  >  2:1877231/1‑99 (MQ=255)
                        ggATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTc                                                                            >  1:1056140/1‑100 (MQ=255)
                        ggATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTc                                                                            >  1:1386614/1‑100 (MQ=255)
                            gCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGc                                                                        <  1:2202702/100‑1 (MQ=255)
                             ccACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCt                                                                       <  1:1270503/100‑1 (MQ=255)
                              cACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCtt                                                                      >  1:1097013/1‑100 (MQ=255)
                              cACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCtt                                                                      <  1:1721156/100‑1 (MQ=255)
                               cgctggttttgcgcaagaaacggcaaactgtttgccgggaatttcgacaccaggagagggctggcaaGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTg                                                                     >  1:1979993‑M1/68‑100 (MQ=255)
                               aCCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTg                                                                     <  1:862471/100‑1 (MQ=255)
                                ccTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGc                                                                    <  2:1465397/100‑1 (MQ=255)
                                 cTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGTGTGAACGCCTTGTCCGGCTTGcc                                                                   <  1:1727058/100‑1 (MQ=255)
                                 cTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCt                                                                       <  1:1871819/96‑1 (MQ=255)
                                   ggttttgcgcaagaaacggcaaactgtttgccgggaatttcgacaccaggagagggctggcaaGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAg                                                                 >  1:1676363‑M1/64‑100 (MQ=255)
                                    gttttgcgcaagaaacggcaaactgtttgccgggaatttcgacaccaggagagggctggcaaGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAg                                                                 >  1:1117460‑M1/63‑99 (MQ=255)
                                    cGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGc                                                                <  1:606746/100‑1 (MQ=255)
                                     gCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGcc                                                               <  2:1903860/100‑1 (MQ=255)
                                      cAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGccc                                                              <  1:369442/100‑1 (MQ=255)
                                      cAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGccc                                                              <  2:1422497/100‑1 (MQ=255)
                                      cAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGccc                                                              <  1:665802/100‑1 (MQ=255)
                                      cAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGccc                                                              <  1:680405/100‑1 (MQ=255)
                                        aCGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCctc                                                            >  1:811696/1‑100 (MQ=255)
                                        aCGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCctc                                                            >  1:1134165/1‑100 (MQ=255)
                                         cGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCctct                                                           >  1:2017958/1‑100 (MQ=255)
                                          gCTGAAAGCTCTCTGCTGTCACAGTATCGACCGAGTGCTTCTAGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCtctc                                                          >  1:1516525/1‑100 (MQ=255)
                                           cTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTcc                                                         >  1:1112508/1‑100 (MQ=255)
                                            tGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCt                                                        >  2:1659028/1‑100 (MQ=255)
                                             gAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTg                                                       >  1:903866/1‑100 (MQ=255)
                                             gAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTg                                                       >  2:1443839/1‑100 (MQ=255)
                                              agaaacggcaaactgtttgccgggaatttcgacaccaggagagggctggcaaGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTgg                                                      >  1:732262‑M1/53‑100 (MQ=255)
                                              aaaGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTgg                                                      >  1:1037148/1‑100 (MQ=255)
                                                 gttctcGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGgtgt                                                   <  1:508952/98‑1 (MQ=255)
                                                  ctctCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTc                                                  <  1:1128044/100‑1 (MQ=255)
                                                   tctcGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGgtgtgg                                                 <  1:1515589/100‑3 (MQ=255)
                                                   tctcGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCg                                                 <  1:1292776/100‑1 (MQ=255)
                                                    ctcGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGa                                                >  1:1384923/1‑100 (MQ=255)
                                                    ctcGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGa                                                >  2:2169358/1‑100 (MQ=255)
                                                    ctcGGCTGTCACAGTATCGACCGAGTGCTTCTCGATTAAGCCTGGTGCCGGATGCGGCGTGAGCGACTTGTCCGGCTGGCCAGCCCTCTCCTGGTGTCGa                                                >  2:1418953/1‑100 (MQ=255)
                                                     tcGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGaa                                               <  1:699589/100‑1 (MQ=255)
                                                      cGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGaaa                                              >  1:1045351/1‑100 (MQ=255)
                                                       ggCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAAt                                             <  2:646293/100‑1 (MQ=255)
                                                         cTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTc                                           <  2:1545965/100‑1 (MQ=255)
                                                           gTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTccc                                         >  1:814884/1‑100 (MQ=255)
                                                           gTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTccc                                         >  1:1825196/1‑100 (MQ=255)
                                                           gTCACAGTATCGACAGAAAACTTCTTGCTTAAGACTAGTGGCAGATGCGGCGTGAACGCCTTGTCCGGCTTGCTAGCCCTCCCCTGGTCTCGAAATTcac                                         >  2:30416/1‑98 (MQ=19)
                                                            tCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCTAAATTCCCg                                        >  1:539497/1‑100 (MQ=255)
                                                            tCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCg                                        <  2:1386608/100‑1 (MQ=255)
                                                             cacaGTATCGACCGAGTGCTTCGCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCgg                                       <  1:999166/100‑1 (MQ=255)
                                                              acaGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGc                                      >  2:171641/1‑100 (MQ=255)
                                                                 gTATCGAACGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCaaa                                   >  1:1178869/1‑100 (MQ=255)
                                                                   aTCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACa                                 >  2:1724362/1‑100 (MQ=255)
                                                                     cGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGt                               >  2:1773413/1‑100 (MQ=255)
                                                                        ccGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTg                            <  2:811696/100‑1 (MQ=255)
                                                                         cGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGc                           <  1:2025334/100‑1 (MQ=255)
                                                                         cGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGc                           <  2:2242583/100‑1 (MQ=255)
                                                                          gAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGcc                          >  1:1181556/1‑100 (MQ=255)
                                                                            gTGCTTCGCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTGCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGcc                          <  2:2177100/98‑1 (MQ=255)
                                                                             tGCTTCTCGCTTAAGCCTGGTGCCGGATGCTGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCTCGGTAAACTGTTTGCCggg                       <  2:85572/100‑3 (MQ=38)
                                                                             tGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACTGTTTGCCggg                       <  2:1749020/100‑3 (MQ=255)
                                                                               cTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTc                     >  1:976572/1‑100 (MQ=255)
                                                                                 tctcGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCtt                   >  2:1292582/1‑100 (MQ=255)
                                                                                   tcGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTgc                 <  1:1326841/100‑1 (MQ=255)
                                                                                     gCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTgcgc               >  2:1168582/1‑100 (MQ=255)
                                                                                     gCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTgcgc               >  2:1435687/1‑100 (MQ=255)
                                                                                      cTTATGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCa              <  2:644964/100‑1 (MQ=255)
                                                                                           gCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAAcc         >  1:1955566/1‑100 (MQ=255)
                                                                                           gCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAAcc         >  1:1819660/1‑100 (MQ=255)
                                                                                           gCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAATTTGCCGTTTCTTGCGCAAAAcc         >  1:708933/1‑100 (MQ=255)
                                                                                                gTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCg     <  1:81610/99‑1 (MQ=255)
                                                                                                  GCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAATAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGt  >  1:444815‑M1/1‑100 (MQ=255)
                                                                                                  GCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGt  <  1:1745896‑M1/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
AGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGT  >  NC_000913/2232638‑2232835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.