New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2232736 =NA (NA)4 (0.050) 3/166 NT NA noncoding (1/34 nt) REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2232766 = NA (NA)noncoding (31/34 nt) REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences

CCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCTTAG  >  NC_000913/2232667‑2232863
                                                                                                   |                                                                                                 
ccACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCt                                                                                                   <  1:1270503/100‑1 (MQ=255)
 cACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCtt                                                                                                  <  1:1721156/100‑1 (MQ=255)
 cACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCtt                                                                                                  >  1:1097013/1‑100 (MQ=255)
  cgctggttttgcgcaagaaacggcaaactgtttgccgggaatttcgacaccaggagagggctggcaaGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTg                                                                                                 >  1:1979993‑M1/68‑100 (MQ=255)
  aCCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTg                                                                                                 <  1:862471/100‑1 (MQ=255)
   ccTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGc                                                                                                <  2:1465397/100‑1 (MQ=255)
    cTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGTGTGAACGCCTTGTCCGGCTTGcc                                                                                               <  1:1727058/100‑1 (MQ=255)
    cTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCt                                                                                                   <  1:1871819/96‑1 (MQ=255)
      ggttttgcgcaagaaacggcaaactgtttgccgggaatttcgacaccaggagagggctggcaaGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAg                                                                                             >  1:1676363‑M1/64‑100 (MQ=255)
       gttttgcgcaagaaacggcaaactgtttgccgggaatttcgacaccaggagagggctggcaaGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAg                                                                                             >  1:1117460‑M1/63‑99 (MQ=255)
       cGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGc                                                                                            <  1:606746/100‑1 (MQ=255)
        gCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGcc                                                                                           <  1:507297/100‑1 (MQ=255)
        gCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGcc                                                                                           <  2:1903860/100‑1 (MQ=255)
         cAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGccc                                                                                          <  1:369442/100‑1 (MQ=255)
         cAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGccc                                                                                          <  1:680405/100‑1 (MQ=255)
         cAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGccc                                                                                          <  1:665802/100‑1 (MQ=255)
         cAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGccc                                                                                          <  2:1422497/100‑1 (MQ=255)
           aCGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCctc                                                                                        >  1:1134165/1‑100 (MQ=255)
           aCGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCctc                                                                                        >  1:811696/1‑100 (MQ=255)
            cGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCctct                                                                                       >  1:2017958/1‑100 (MQ=255)
             gCTGAAAGCTCTCTGCTGTCACAGTATCGACCGAGTGCTTCTAGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCtctc                                                                                      >  1:1516525/1‑100 (MQ=255)
              cTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTcc                                                                                     >  1:1112508/1‑100 (MQ=255)
              cTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTACTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCCTGTCCGGCTTGCCAGCCct                                                                                         >  2:1728578/1‑96 (MQ=255)
               tGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCt                                                                                    >  2:1659028/1‑100 (MQ=255)
                gAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTg                                                                                   >  1:903866/1‑100 (MQ=255)
                gAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTg                                                                                   >  2:1443839/1‑100 (MQ=255)
                 agaaacggcaaactgtttgccgggaatttcgacaccaggagagggctggcaaGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTgg                                                                                  >  1:732262‑M1/53‑100 (MQ=255)
                 aaaGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTgg                                                                                  >  1:1037148/1‑100 (MQ=255)
                    gttctcGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGgtgt                                                                               <  1:508952/98‑1 (MQ=255)
                     ctctCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTc                                                                              <  1:1128044/100‑1 (MQ=255)
                      tctcGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGgtgtgg                                                                             <  1:1515589/100‑3 (MQ=255)
                      tctcGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCg                                                                             <  1:1292776/100‑1 (MQ=255)
                       ctcGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGa                                                                            >  1:1384923/1‑100 (MQ=255)
                       ctcGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGa                                                                            >  2:2169358/1‑100 (MQ=255)
                       ctcGGCTGTCACAGTATCGACCGAGTGCTTCTCGATTAAGCCTGGTGCCGGATGCGGCGTGAGCGACTTGTCCGGCTGGCCAGCCCTCTCCTGGTGTCGa                                                                            >  2:1418953/1‑100 (MQ=255)
                        tcGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGaa                                                                           <  1:699589/100‑1 (MQ=255)
                         cGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGaaa                                                                          >  1:1045351/1‑100 (MQ=255)
                          ggCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAAt                                                                         <  2:646293/100‑1 (MQ=255)
                            cTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTc                                                                       <  2:1545965/100‑1 (MQ=255)
                              gTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTccc                                                                     >  1:814884/1‑100 (MQ=255)
                              gTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTccc                                                                     >  1:1825196/1‑100 (MQ=255)
                              gTCACAGTATCGACAGAAAACTTCTTGCTTAAGACTAGTGGCAGATGCGGCGTGAACGCCTTGTCCGGCTTGCTAGCCCTCCCCTGGTCTCGAAATTcac                                                                     >  2:30416/1‑98 (MQ=19)
                               tCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCTAAATTCCCg                                                                    >  1:539497/1‑100 (MQ=255)
                               tCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCg                                                                    <  2:1386608/100‑1 (MQ=255)
                                cacaGTATCGACCGAGTGCTTCGCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCgg                                                                   <  1:999166/100‑1 (MQ=255)
                                 acaGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGc                                                                  >  2:171641/1‑100 (MQ=255)
                                    gTATCGAACGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCaaa                                                               >  1:1178869/1‑100 (MQ=255)
                                      aTCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACa                                                             >  2:1724362/1‑100 (MQ=255)
                                        cGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGt                                                           >  2:1773413/1‑100 (MQ=255)
                                           ccGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTg                                                        <  2:811696/100‑1 (MQ=255)
                                            cGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGc                                                       <  2:2242583/100‑1 (MQ=255)
                                            cGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGc                                                       <  1:2025334/100‑1 (MQ=255)
                                             gAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGcc                                                      >  1:1181556/1‑100 (MQ=255)
                                               gTGCTTCGCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTGCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGcc                                                      <  2:2177100/98‑1 (MQ=255)
                                                tGCTTCTCGCTTAAGCCTGGTGCCGGATGCTGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCTCGGTAAACTGTTTGCCggg                                                   <  2:85572/100‑3 (MQ=38)
                                                tGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACTGTTTGCCggg                                                   <  2:1749020/100‑3 (MQ=255)
                                                  cTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTc                                                 >  1:976572/1‑100 (MQ=255)
                                                   ccaggagagggctggcaagccggacaaggcgttcacgccgcatccggcTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCt                                                >  1:732262‑M2/49‑100 (MQ=255)
                                                    tctcGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCtt                                               >  2:1292582/1‑100 (MQ=255)
                                                      tcGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTgc                                             <  1:1326841/100‑1 (MQ=255)
                                                        gCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTgcgc                                           >  2:1168582/1‑100 (MQ=255)
                                                        gCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTgcgc                                           >  2:1435687/1‑100 (MQ=255)
                                                        gCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTgcgc                                           >  2:984500/1‑100 (MQ=255)
                                                         cTTATGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCa                                          <  2:644964/100‑1 (MQ=255)
                                                              gCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAAcc                                     >  1:1819660/1‑100 (MQ=255)
                                                              gCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAAcc                                     >  1:1955566/1‑100 (MQ=255)
                                                              gCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAATTTGCCGTTTCTTGCGCAAAAcc                                     >  1:708933/1‑100 (MQ=255)
                                                              ctggcaagccggacaaggcgttcacgccgcatccggcTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAAcc                                     >  1:1676363‑M2/38‑100 (MQ=255)
                                                              ctggcaagccggacaaggcgttcacgccgcatccggcTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAAc                                      >  1:1117460‑M2/38‑99 (MQ=255)
                                                                 tGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGc                                  <  2:1097011/100‑1 (MQ=255)
                                                                  caagccggacaaggcgttcacgccgcatccggcTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCg                                 >  1:1979993‑M2/34‑100 (MQ=255)
                                                                   gTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCg                                 <  1:81610/99‑1 (MQ=255)
                                                                     GCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAATAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGt                              >  1:444815‑M1/1‑100 (MQ=255)
                                                                     GCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGt                              <  1:1745896‑M1/100‑1 (MQ=255)
                                                                       CGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTaa                            <  1:641138‑M1/100‑1 (MQ=255)
                                                                       CGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTaa                            >  2:481646‑M1/1‑100 (MQ=255)
                                                                        GGATGCGGCGTGAACGCCTTGTCCGGCTTGCAAGCCCTCTCCTGGTGTCCAAATGCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTaaa                           >  1:1334304‑M1/1‑100 (MQ=255)
                                                                             cggcgTGAACGCCTTGTCCTGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACCGCTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAACTAGc                      >  2:1407240/1‑100 (MQ=255)
                                                                             cggcgTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGc                      >  1:1429160/1‑100 (MQ=255)
                                                                              ggcgTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCTGGTAAAGTAGcc                     <  1:1467839/100‑1 (MQ=255)
                                                                              ggcgTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGcc                     >  2:2011787/1‑100 (MQ=255)
                                                                               gcgGGAACGCCTTGTCCGGCTTGCGAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGcc                     <  2:1540126/99‑1 (MQ=255)
                                                                                   gAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATg                <  1:894229/100‑1 (MQ=255)
                                                                                   gAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATg                <  1:751954/100‑1 (MQ=255)
                                                                                   gAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATg                >  1:1658611/1‑100 (MQ=255)
                                                                                   gAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTGCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATg                >  1:633916/1‑100 (MQ=255)
                                                                                       gCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGaaa            >  1:1314226/1‑100 (MQ=255)
                                                                                         cTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAACTTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAAtt          <  1:774053/100‑1 (MQ=255)
                                                                                         cTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAAt           >  1:2135921/1‑99 (MQ=255)
                                                                                           tGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAAtttt        >  2:35481/1‑100 (MQ=255)
                                                                                            gTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTc       <  2:2216624/100‑1 (MQ=255)
                                                                                             tccggcTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTcc      <  2:1936017‑M2/94‑1 (MQ=255)
                                                                                             tccggcTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTcc      <  1:1403349‑M2/94‑1 (MQ=255)
                                                                                              ccggcTTGCCAGCCCTCTCCTGGTGTCGAACTTACCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGAAAATTTTCCt     >  2:1475511‑M2/6‑100 (MQ=255)
                                                                                               cggcTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCtt    >  1:973192‑M2/5‑100 (MQ=255)
                                                                                               cggcTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCtt    <  2:1116663‑M2/96‑1 (MQ=255)
                                                                                               cggcTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCtt    >  2:832220‑M2/5‑100 (MQ=255)
                                                                                                 gcTTGCCATCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCTTAg  <  1:1305597‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                 
CCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAAGCCTGGTGCCGGATGCGGCGTGAACGCCTTGTCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCTTAG  >  NC_000913/2232667‑2232863

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.