| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | DH1 | 2,443,520 | Δ23,060 bp | ynaE–[ttcA] | 33 genes ynaE, pinR, tfaR, stfR, ECDH1_RS12030, ECDH1_RS12035, ECDH1_RS12040, insH1, insH1, ECDH1_RS12055, ECDH1_RS12060, ECDH1_RS12065, ynaK, trkG, ECDH1_RS12080, ECDH1_RS12085, ydaV, ydaU, ydaT, ydaS, racR, ydaF, sieB, kil, ydaE, racC, recE, recT, lar, ydaC, ydaQ, intR, [ttcA] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | DH1 | 2443520 | 2466579 | 23060 | 510 [3] | [4] 511 | ynaE–[ttcA] | 33 genes ynaE, pinR, tfaR, stfR, ECDH1_RS12030, ECDH1_RS12035, ECDH1_RS12040, insH1, insH1, ECDH1_RS12055, ECDH1_RS12060, ECDH1_RS12065, ynaK, trkG, ECDH1_RS12080, ECDH1_RS12085, ydaV, ydaU, ydaT, ydaS, racR, ydaF, sieB, kil, ydaE, racC, recE, recT, lar, ydaC, ydaQ, intR, [ttcA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | DH1 | = 2443519 | 3 (0.010) | 403 (0.990) | 182/248 | 0.1 | 99.3% | intergenic (+226/‑735) | uspF/ynaE | universal stress protein F/cold‑shock protein |
| ? | DH1 | 2466580 = | 3 (0.010) | coding (51/936 nt) | ttcA | tRNA 2‑thiocytidine(32) synthetase TtcA | |||||