| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | DH1 | 2,443,520 | Δ23,060 bp | ynaE–[ttcA] | 33 genes ynaE, pinR, tfaR, stfR, ECDH1_RS12030, ECDH1_RS12035, ECDH1_RS12040, insH1, insH1, ECDH1_RS12055, ECDH1_RS12060, ECDH1_RS12065, ynaK, trkG, ECDH1_RS12080, ECDH1_RS12085, ydaV, ydaU, ydaT, ydaS, racR, ydaF, sieB, kil, ydaE, racC, recE, recT, lar, ydaC, ydaQ, intR, [ttcA] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | DH1 | 2443520 | 2466579 | 23060 | 510 [3] | [4] 511 | ynaE–[ttcA] | 33 genes ynaE, pinR, tfaR, stfR, ECDH1_RS12030, ECDH1_RS12035, ECDH1_RS12040, insH1, insH1, ECDH1_RS12055, ECDH1_RS12060, ECDH1_RS12065, ynaK, trkG, ECDH1_RS12080, ECDH1_RS12085, ydaV, ydaU, ydaT, ydaS, racR, ydaF, sieB, kil, ydaE, racC, recE, recT, lar, ydaC, ydaQ, intR, [ttcA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | DH1 | = 2443519 | 3 (0.010) | 403 (0.990) | 182/248 | 0.1 | 99.3% | intergenic (+226/‑735) | uspF/ynaE | universal stress protein F/cold‑shock protein |
| ? | DH1 | 2466580 = | 3 (0.010) | coding (51/936 nt) | ttcA | tRNA 2‑thiocytidine(32) synthetase TtcA | |||||
Only 100 of 511 total aligned reads displayed.
TGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAGCGCGCC > DH1/2466430‑2466729 | ccatacacgccacagttttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaa < 3:1312667‑M2/1‑1 (MQ=255) cacgccacagttttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTAc > 3:179662‑M2/146‑150 (MQ=255) acgccacagttttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACaa < 1:1014779‑M2/7‑1 (MQ=255) gccacagttttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACaaaa < 8:1630176‑M2/9‑1 (MQ=255) cacagttttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAAc < 7:751309‑M2/11‑1 (MQ=255) gttttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCt > 7:525818‑M2/137‑151 (MQ=255) tttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGcgt > 5:1749553‑M2/133‑151 (MQ=255) tatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGcgtc < 3:578777‑M2/20‑1 (MQ=255) tatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGcgtc < 4:1661143‑M2/20‑1 (MQ=255) atatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGcgtcg < 1:1441591‑M2/21‑1 (MQ=255) atcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTa < 7:1924721‑M2/23‑1 (MQ=255) tcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAAc > 3:793231‑M2/127‑151 (MQ=255) agatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGt > 3:1910390‑M2/125‑151 (MQ=255) tttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTggg > 1:651619‑M2/122‑151 (MQ=255) tttcttatgctgggcgttcaggcatgacgcataatattctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaataaaaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTggg > 6:941719‑M2/122‑151 (MQ=255) ttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTggg < 4:420255‑M2/30‑1 (MQ=255) tcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCg > 2:1086323‑M2/120‑151 (MQ=255) cttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCg > 4:609543‑M2/119‑150 (MQ=255) ttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGa > 4:949925‑M2/118‑150 (MQ=255) ttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGa > 6:511554‑M2/118‑150 (MQ=255) tatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCg < 7:1767669‑M2/32‑1 (MQ=255) ggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGc < 4:1071697‑M2/42‑1 (MQ=255) gttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGa < 4:12048‑M2/45‑1 (MQ=255) tccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGAc < 2:284053‑M2/46‑1 (MQ=255) ccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACtt < 6:438573‑M2/48‑1 (MQ=255) atgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAat > 8:519779‑M2/99‑150 (MQ=255) tgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAatat > 6:1037604‑M2/98‑151 (MQ=255) tgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAatat > 8:1473517‑M2/98‑151 (MQ=255) catactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTg > 3:878789‑M2/93‑151 (MQ=255) ctcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctcaacaaATTACAAAAACCTCTGCCTCGTAACGTGCGCGAAGCCATTGCTGACTTCAATATGATTga > 1:873376‑M2/89‑148 (MQ=255) tcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCAGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTgaaga > 8:1716710‑M2/88‑150 (MQ=255) cttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTgaaga > 7:1135751‑M2/87‑149 (MQ=255) tctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACATAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGaagaag < 5:1355066‑M2/65‑1 (MQ=255) tctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGaagaag < 1:1779449‑M2/65‑1 (MQ=255) tctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAgg < 1:1521915‑M2/66‑1 (MQ=255) tctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAgg < 7:126285‑M2/66‑1 (MQ=255) tgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCg > 8:21386‑M2/83‑150 (MQ=255) gatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGc < 4:333522‑M2/67‑1 (MQ=255) gatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGc < 5:1671359‑M2/67‑1 (MQ=255) gatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGa < 1:1229453‑M2/69‑1 (MQ=255) gatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGAt > 3:157336‑M2/82‑151 (MQ=255) gatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGAt > 7:1843129‑M2/82‑151 (MQ=255) ccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCCTTGCTGACTTCAATATGATTGAAGACGGCGATCGc > 5:1265274‑M2/78‑150 (MQ=255) ccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGca < 1:442732‑M2/74‑1 (MQ=255) aTTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGcatc > 1:952049/1‑150 (MQ=255) ataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaataagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGcatcat > 5:198713‑M2/74‑151 (MQ=255) aacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATg < 1:1125017‑M2/79‑1 (MQ=255) gaattgagtctcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGttt < 7:1371137‑M2/83‑1 (MQ=255) gaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGttt > 2:896550‑M2/69‑151 (MQ=255) ttgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGcc > 3:1205897‑M2/66‑151 (MQ=255) agtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaacaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCctct < 5:1148839‑M2/89‑1 (MQ=255) tcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTcc > 7:334242‑M2/61‑151 (MQ=255) cgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCg < 3:1111406‑M2/92‑1 (MQ=255) gcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCgg < 2:717836‑M2/93‑1 (MQ=255) gcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCgg > 4:757363‑M2/59‑151 (MQ=255) cttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCggg > 7:898850‑M2/58‑151 (MQ=255) cttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCggg > 8:754734‑M2/58‑151 (MQ=255) cttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCggg > 4:1451631‑M2/58‑151 (MQ=255) cttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGGAACCTGGGCGACGCCATTGCTGACTTCAATAAGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCggg > 6:869544‑M2/58‑151 (MQ=255) tttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCggggg > 1:1316518‑M2/56‑151 (MQ=255) tttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCggggg > 1:767825‑M2/56‑151 (MQ=255) tttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCggggg > 7:694893‑M2/56‑151 (MQ=255) ttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGt > 4:83486‑M2/55‑151 (MQ=255) aataatGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGt < 3:472447/151‑1 (MQ=255) taaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGt > 1:1084983‑M2/54‑150 (MQ=255) taaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGt < 4:1592336‑M2/97‑1 (MQ=255) aaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTa < 3:373756‑M2/98‑1 (MQ=255) aaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTa < 5:651426‑M2/98‑1 (MQ=255) cgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACa < 5:52062‑M2/104‑1 (MQ=255) gcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGc > 2:1146823‑M2/46‑151 (MQ=255) aaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCt > 2:1286701‑M2/44‑150 (MQ=255) caagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCa < 2:190855‑M2/113‑1 (MQ=255) aagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCAt > 2:1554341‑M2/38‑151 (MQ=255) aagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCAt > 8:625106‑M2/38‑151 (MQ=255) agaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATg > 6:1236002‑M2/37‑151 (MQ=255) agaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATg < 6:1447844‑M2/115‑1 (MQ=255) agaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCCATCGCATCATGGTTTGCCACTCAGGGGGTAAAGACAGCTATACCATg > 5:923604‑M2/37‑151 (MQ=255) gaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGc < 7:1469584‑M2/116‑1 (MQ=255) aaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCt < 7:1590987‑M2/117‑1 (MQ=255) aattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTg < 8:101849‑M2/118‑1 (MQ=255) aattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGGCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTg > 2:1494989‑M2/34‑151 (MQ=255) tagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGga < 6:1867121‑M2/120‑1 (MQ=255) agtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGgag < 2:399213‑M2/121‑1 (MQ=255) aagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTc > 2:759043‑M2/27‑151 (MQ=255) aagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTc > 4:1858594‑M2/27‑151 (MQ=255) agaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTgcgc < 2:1821958‑M2/130‑1 (MQ=255) gcacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCtgcgcc < 5:814800‑M2/131‑2 (MQ=255) aacaatacaaccttaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGGGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCaa < 2:1189138‑M2/132‑1 (MQ=255) atacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTg < 7:1019784‑M2/136‑1 (MQ=255) atacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTg < 5:1521823‑M2/136‑1 (MQ=255) atacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTg < 5:1021856‑M2/136‑1 (MQ=255) caacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTgcag < 5:395958‑M2/139‑1 (MQ=255) caacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTgc > 6:1670490‑M2/13‑149 (MQ=255) aacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTgcagc > 4:175505‑M2/12‑151 (MQ=255) aacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTgcagc > 8:1167961‑M2/12‑151 (MQ=255) ctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCaa > 1:1628291‑M2/9‑150 (MQ=255) gaacaaATTACAAAAACGTGTGCTTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAg < 4:129744‑M2/144‑1 (MQ=255) aacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAgc < 6:1330105‑M2/145‑1 (MQ=255) caaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAgcgcg > 3:967855‑M2/4‑151 (MQ=255) caaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAgcgcg > 1:189311‑M2/4‑151 (MQ=255) | TGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAGCGCGCC > DH1/2466430‑2466729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |