| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | DH1 | 2,443,520 | Δ23,060 bp | ynaE–[ttcA] | 33 genes ynaE, pinR, tfaR, stfR, ECDH1_RS12030, ECDH1_RS12035, ECDH1_RS12040, insH1, insH1, ECDH1_RS12055, ECDH1_RS12060, ECDH1_RS12065, ynaK, trkG, ECDH1_RS12080, ECDH1_RS12085, ydaV, ydaU, ydaT, ydaS, racR, ydaF, sieB, kil, ydaE, racC, recE, recT, lar, ydaC, ydaQ, intR, [ttcA] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | DH1 | 2443520 | 2466579 | 23060 | 510 [3] | [4] 511 | ynaE–[ttcA] | 33 genes ynaE, pinR, tfaR, stfR, ECDH1_RS12030, ECDH1_RS12035, ECDH1_RS12040, insH1, insH1, ECDH1_RS12055, ECDH1_RS12060, ECDH1_RS12065, ynaK, trkG, ECDH1_RS12080, ECDH1_RS12085, ydaV, ydaU, ydaT, ydaS, racR, ydaF, sieB, kil, ydaE, racC, recE, recT, lar, ydaC, ydaQ, intR, [ttcA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | DH1 | = 2443519 | 3 (0.010) | 403 (0.990) | 182/248 | 0.1 | 99.3% | intergenic (+226/‑735) | uspF/ynaE | universal stress protein F/cold‑shock protein |
| ? | DH1 | 2466580 = | 3 (0.010) | coding (51/936 nt) | ttcA | tRNA 2‑thiocytidine(32) synthetase TtcA | |||||
Only 100 of 510 total aligned reads displayed.
CCATACACGCCACAGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTTTGCAGCGTTTTGCCCCATT > DH1/2443370‑2443665 | ccATACACGCCACAGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAA > 8:1793250‑M1/1‑150 (MQ=255) cATACACGCCACAGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCATAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAat < 6:920319‑M1/151‑3 (MQ=255) cATACACGCCACAGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAat < 7:1905385‑M1/151‑3 (MQ=255) cATACACGCCACAGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAat > 4:1022763‑M1/1‑149 (MQ=255) acacGCCACAGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAatta < 1:88204‑M1/150‑5 (MQ=255) acacGCCACAGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGC‑TTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattac > 1:77393‑M1/1‑145 (MQ=255) aacgCCACAGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattaca < 3:1651421‑M1/150‑7 (MQ=255) acGCCACAGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaa < 1:1014779‑M1/151‑8 (MQ=255) gCCACAGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaa < 7:1273108‑M1/151‑10 (MQ=255) ccACAGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaa > 3:1393856‑M1/1‑141 (MQ=255) ccACAGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaa > 8:769243‑M1/1‑141 (MQ=255) acaGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTATGATGCAATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacg > 3:202664‑M1/1‑139 (MQ=255) aGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtc < 4:468597‑M1/151‑15 (MQ=255) aGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtc < 4:971713‑M1/151‑15 (MQ=255) gTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtct < 4:913774‑M1/151‑16 (MQ=255) ttttttATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctg > 5:1893541‑M1/1‑135 (MQ=255) tttttATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctg < 2:104191‑M1/150‑17 (MQ=255) tttATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgt > 7:654956‑M1/1‑132 (MQ=255) tttATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACCCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcg < 5:1170863‑M1/150‑19 (MQ=255) tatCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgt > 7:966824‑M1/1‑128 (MQ=255) cAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaac < 5:1711456‑M1/150‑26 (MQ=255) gATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtg < 1:1639374‑M1/151‑29 (MQ=255) ttCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggc > 1:542359‑M1/1‑120 (MQ=255) tCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcg > 2:119434‑M1/1‑119 (MQ=255) tCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcg > 3:537158‑M1/1‑119 (MQ=255) tCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcg > 7:27219‑M1/1‑119 (MQ=255) aTGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagc > 6:1283982‑M1/1‑115 (MQ=255) gCTGGGGGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagcca < 8:1112937‑M1/151‑39 (MQ=255) gCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagcc < 2:1127827‑M1/150‑38 (MQ=255) gCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagcc < 4:1436620‑M1/150‑38 (MQ=255) tGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccatt > 7:1749071‑M1/1‑111 (MQ=255) gCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggctaagccattgct < 8:541620‑M1/151‑44 (MQ=255) gCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgct < 7:737675‑M1/151‑44 (MQ=255) gTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctg > 1:1782069‑M1/1‑106 (MQ=255) tCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgac < 1:1539665‑M1/150‑47 (MQ=255) gCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGACGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttca > 4:1297169‑M1/1‑100 (MQ=255) cATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaat > 5:1450581‑M1/1‑99 (MQ=255) cATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattg < 6:1105227‑M1/151‑60 (MQ=255) aCTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaac > 7:103986‑M1/1‑89 (MQ=255) tctGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaagg < 4:1526925‑M1/150‑67 (MQ=255) tctGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaagg < 4:788351‑M1/150‑67 (MQ=255) gATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcga < 1:1229453‑M1/150‑70 (MQ=255) aTGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacttctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatc < 2:426532‑M1/151‑72 (MQ=255) tGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcg > 7:1431131‑M1/1‑79 (MQ=255) ccATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttctatatgattgaagaaggcgatcgc > 1:1488384‑M1/1‑77 (MQ=255) cATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcat > 8:1585455‑M1/1‑76 (MQ=255) ataACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcat > 3:816451‑M1/1‑73 (MQ=255) taACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatg > 8:650445‑M1/1‑72 (MQ=255) taACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacggctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatg > 5:326464‑M1/1‑72 (MQ=255) aaCGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatg < 4:363470‑M1/150‑80 (MQ=255) aaCGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatg < 1:1125017‑M1/150‑80 (MQ=255) aaCGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatg < 7:504040‑M1/150‑80 (MQ=255) cGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtt > 4:231133‑M1/1‑69 (MQ=255) cGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtt < 7:1206170‑M1/151‑83 (MQ=255) cGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtt < 2:1862736‑M1/151‑83 (MQ=255) cGAATTGAGTCGATTTTAAATGTCGCAAAATAAAGAAATTAGTAAGAAAGAACAATACAACCTTAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtt < 6:1365311‑M1/151‑83 (MQ=255) gAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATAAAACCTGAACAAattacaaaaacgtctgcgtcgtaacgagggcgaagccattgcagacttaaatatgaatgaataaggcgataccatcatctttt > 2:159068‑M1/1‑68 (MQ=255) aaTTAAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACGATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttg > 2:1292250‑M1/1‑67 (MQ=255) aTTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgacgccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgc > 3:396792‑M1/1‑66 (MQ=255) ttGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcc > 3:1205897‑M1/1‑65 (MQ=255) cGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccg < 3:1111406‑M1/151‑93 (MQ=255) gCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgg > 4:1732060‑M1/1‑58 (MQ=255) gCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgg < 2:717836‑M1/151‑94 (MQ=255) tttAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccggggg > 1:1316518‑M1/1‑55 (MQ=255) tttAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatagtttgcctctccggggg > 7:1829052‑M1/1‑55 (MQ=255) tAAATGTCGCATAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggt < 6:1917324‑M1/150‑98 (MQ=255) tAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggt > 1:1084983‑M1/1‑53 (MQ=255) aaaTGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggta > 6:703446‑M1/1‑52 (MQ=255) aaTGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaa < 5:582621‑M1/151‑101 (MQ=255) gTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagac > 7:790409‑M1/1‑48 (MQ=255) cGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagac > 5:702232‑M1/1‑46 (MQ=255) gCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagc > 5:981682‑M1/1‑45 (MQ=255) gCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagc < 3:181420‑M1/151‑107 (MQ=255) aaaaTCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagct > 3:746624‑M1/1‑43 (MQ=255) aaaTCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctat < 2:1923424‑M1/151‑110 (MQ=255) aGAAATTAGTAAGAAAGAACAATACAACCTGAACCAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatg > 5:1592996‑M1/1‑36 (MQ=255) aGAAATTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatg > 8:261119‑M1/1‑36 (MQ=255) aaaTTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccctgct > 4:743949‑M1/1‑34 (MQ=255) aaaTTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgct > 4:1815027‑M1/1‑34 (MQ=255) aaTTAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctg > 5:1306834‑M1/1‑33 (MQ=255) ttAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgactctccgggggtaaagacagctataccatgctgg > 2:28757‑M1/1‑31 (MQ=255) tAGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctgg > 4:1656956‑M1/1‑30 (MQ=255) aGTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctgg > 5:1125281‑M1/1‑29 (MQ=255) gTAAGAAAGAACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctgg > 6:182650‑M1/1‑28 (MQ=255) aagaaagaACAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattc > 2:759043‑M1/1‑26 (MQ=255) aaagaaCAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgc < 2:1497093‑M1/151‑129 (MQ=255) gaaCAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgca < 2:1158082‑M1/151‑132 (MQ=255) aaCAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgcaa < 7:1532112‑M1/151‑133 (MQ=255) aaCAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgca > 8:1318229‑M1/1‑19 (MQ=255) aCAATACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgcaat > 4:1149840‑M1/1‑18 (MQ=255) aaTACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgcaattt < 5:849060‑M1/151‑136 (MQ=255) aTACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgcaatttg > 8:1676367‑M1/1‑15 (MQ=255) aTACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgcaatttg > 6:471658‑M1/1‑15 (MQ=255) aTACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcaatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgcaatttg < 1:1912283‑M1/151‑137 (MQ=255) aTACAACCTGAACAAattacaaaaacgtctgcgtcgtaacgtcggcgaagccattgctcacttcaatatgattgaagaaggcgatcgcatcatggtttccctctcagggggtaaagacagctataccatgctggagattctgcgcaattat > 6:1565127‑M1/1‑15 (MQ=255) aaCCTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgcaatttgcagc < 5:498427‑M1/151‑141 (MQ=255) cTGAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgcaatttgcagaaa > 1:680118‑M1/1‑8 (MQ=255) gAACAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgcaatttgcagcaaagc < 6:979283‑M1/151‑146 (MQ=255) aaCAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgcaatttgcagcaaagcg < 2:918955‑M1/151‑147 (MQ=255) aaCAAattacaaaaacgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgatcgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgcaatttgcagcaaagcg < 3:951265‑M1/151‑147 (MQ=255) | CCATACACGCCACAGTTTTTTATATCAGATTTCTTATGCTGGGCGTTCCGGCATGACGCATACTCTTCTGATGCCATATAACGAATTGAGTCGCTTTTAAATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTTTGCAGCGTTTTGCCCCATT > DH1/2443370‑2443665 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |