New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? DH1 = 22500483 (0.140)555 (0.950) 244/300 0.0 87.0% coding (394/528 nt) gadE transcriptional regulator GadE
?DH1 = 300335 NA (NA)noncoding (772/773 nt) repeat_region repeat region

Only 100 of 707 total aligned reads displayed.

AGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGTTCTGGAATCGAGAGGCTAA  >  DH1/300187‑300484
                                                                                                                                                    |                                                                                                                                                     
cgagaTAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCtt                                                                                                                                                     <  2:655818/150‑1 (MQ=11)
agagATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCtt                                                                                                                                                     <  4:1810061/151‑1 (MQ=11)
 gagaTAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACGACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCttt                                                                                                                                                    <  1:935278/151‑1 (MQ=14)
   gaTAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTaa                                                                                                                                                  <  5:932759/151‑1 (MQ=32)
     tAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATg                                                                                                                                                >  4:1431241/1‑151 (MQ=33)
        cgcTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCa                                                                                                                                             <  8:193352/151‑1 (MQ=35)
           tGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATa                                                                                                                                           >  5:1111400/1‑150 (MQ=38)
           tGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATa                                                                                                                                           >  4:2040764/1‑150 (MQ=38)
           tGATGTCCGGCGGTGCTTTTGCCCTTACGCACCACCCCGTCACTAGCAGAACAGGAGGGACAGCTGATAGAAACAGAACCCACTGGAGCACCTCAAAAACACCATCATACACTAAAACAGAAAGTAGGCAGCCTCACCTTTAATGTCAtt                                                                                                                                           >  7:2083688/1‑149 (MQ=11)
            gATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATa                                                                                                                                           <  3:1091642/149‑1 (MQ=38)
            gATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATa                                                                                                                                           <  7:1627585/149‑1 (MQ=38)
                  cggcggTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAata                                                                                                                                   <  2:2069396/151‑1 (MQ=255)
                        tGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGaa                                                                                                                              >  3:1216651/1‑150 (MQ=255)
                           ttttGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGc                                                                                                                          >  8:2182908/1‑151 (MQ=255)
                           ttttGCCGTTACGCACCACACAGACAGTAGCTGAACAGTAGGGACAGCTGATAGAAAAAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAAACAGTAAGTTGGCAGCATCAACTTTAATGTCAAAAGTAAATATTGAAATGc                                                                                                                          >  2:1387307/1‑151 (MQ=17)
                            tttGCCGTTAAGCACCACCCCGTCAGTAGCTCAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATAAACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCt                                                                                                                         >  8:154569/1‑151 (MQ=255)
                              tGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCta                                                                                                                        <  3:356795/150‑1 (MQ=255)
                               gCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCtata                                                                                                                      <  2:471468/151‑1 (MQ=255)
                               gCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCtat                                                                                                                       <  6:711424/150‑1 (MQ=255)
                               gCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCtat                                                                                                                       <  8:1114990/150‑1 (MQ=255)
                                ccGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCtata                                                                                                                      >  6:368711/1‑150 (MQ=255)
                                 cGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAAt                                                                                                                    <  4:431533/151‑1 (MQ=255)
                                 cGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAAt                                                                                                                    >  1:1807685/1‑151 (MQ=255)
                                 cGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAAt                                                                                                                    >  7:697400/1‑151 (MQ=255)
                                  gTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATc                                                                                                                   <  5:310710/151‑1 (MQ=255)
                                     aCGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATcccc                                                                                                                <  1:836305/151‑1 (MQ=255)
                                       gCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGa                                                                                                              <  5:1999909/151‑1 (MQ=255)
                                        caccacCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGAt                                                                                                             <  3:1766003/151‑1 (MQ=255)
                                         accaccCCGTCAGTAGCTTAACAGGAGCGACAGCTGATATAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATc                                                                                                            <  7:295427/151‑1 (MQ=255)
                                         accaccCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATc                                                                                                            <  8:249571/151‑1 (MQ=255)
                                            accCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACt                                                                                                         <  3:646869/151‑1 (MQ=255)
                                                cGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAAcc                                                                                                     <  7:1463877/151‑1 (MQ=255)
                                                 gTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCg                                                                                                    <  2:888016/151‑1 (MQ=255)
                                                     gTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGTAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCt                                                                                                <  3:72624/151‑1 (MQ=255)
                                                       aGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTg                                                                                              >  5:1492265/1‑151 (MQ=255)
                                                         cTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGt                                                                                             >  1:12664/1‑150 (MQ=255)
                                                          tGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGt                                                                                             >  6:217941/1‑149 (MQ=255)
                                                           gAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGt                                                                                             >  8:1221974/1‑148 (MQ=255)
                                                             aCAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATc                                                                                        <  4:1101147/151‑1 (MQ=255)
                                                              cAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATc                                                                                        >  1:1717378/1‑150 (MQ=255)
                                                               aggaggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATc                                                                                        >  6:1912400/1‑149 (MQ=255)
                                                                ggaggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAgg                                                                                     >  2:792854/1‑151 (MQ=255)
                                                                     gACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTa                                                                                <  6:50361/151‑1 (MQ=255)
                                                                       cAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCGTCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATg                                                                              >  7:1087382/1‑151 (MQ=255)
                                                                        aGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATg                                                                              >  1:2207436/1‑150 (MQ=255)
                                                                          cTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTATATGaa                                                                            >  4:286411/1‑150 (MQ=255)
                                                                           tGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAat                                                                          >  8:1844470/1‑151 (MQ=255)
                                                                             aTAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAatc                                                                         <  2:1061289/150‑1 (MQ=255)
                                                                               aGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAatcatc                                                                      <  7:2161061/151‑1 (MQ=255)
                                                                                  aaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCatt                                                                   <  8:438459/151‑1 (MQ=255)
                                                                                    cAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCattat                                                                 <  4:963570/151‑1 (MQ=255)
                                                                                     aGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCattatt                                                                <  5:1408169/151‑1 (MQ=255)
                                                                                     aGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCACCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCCTTCTTGTAGATCAGGGTTTATGAAATCATCattatt                                                                >  1:508955/1‑151 (MQ=255)
                                                                                          ccACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCCCTACCCGTTCTTGTAGATCAGGGTTTATGAAATCAGCATTATTTCtat                                                           >  3:128937/1‑151 (MQ=255)
                                                                                          ccACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCtat                                                           >  2:1237699/1‑151 (MQ=255)
                                                                                           cACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCtata                                                          <  8:2077279/151‑1 (MQ=255)
                                                                                            aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCtata                                                          >  3:1920590/1‑150 (MQ=255)
                                                                                            aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATaa                                                         <  1:1448356/151‑1 (MQ=255)
                                                                                               ggAGCACCTCAAAAACTCCATCTTACTCTAAATGAGTTAGTTGGGAGCATCACCTTTAATGTCATAAGTAAATATTGATATGCTATAATCCCCGATCACTAACCGTTCTTGTAGTTCAGGGTTTATGAAATCATCATTATTTCTATaaa                                                        <  6:2234591/149‑1 (MQ=255)
                                                                                                   cACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCAt                                                  >  7:1388843/1‑151 (MQ=255)
                                                                                                    aCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCAtt                                                 <  3:1350242/151‑1 (MQ=255)
                                                                                                      cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCAttt                                                >  5:645192/1‑150 (MQ=255)
                                                                                                        cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTa                                               <  6:859754/149‑1 (MQ=255)
                                                                                                        cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACg                                             >  5:83602/1‑151 (MQ=255)
                                                                                                        cAAAAACACCATCATACACTAAATCAGTAACTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTa                                               <  1:1602298/149‑1 (MQ=255)
                                                                                                          aaaaCACCATCATACACTAAATCAGTAAGTTTGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGc                                           <  4:579402/151‑1 (MQ=255)
                                                                                                          aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGc                                           >  5:2174771/1‑151 (MQ=255)
                                                                                                            aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCa                                          >  3:1584116/1‑150 (MQ=255)
                                                                                                              cacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCaaa                                        >  1:2014482/1‑150 (MQ=255)
                                                                                                               acCATCATACACTATATCAGTAAGTTGGCAGCATCAGCTTTAATTTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTATTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCaaaaa                                      <  8:622075/151‑1 (MQ=255)
                                                                                                               acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCaaaa                                       >  5:1892560/1‑150 (MQ=255)
                                                                                                                ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAg                                     <  4:1539416/151‑1 (MQ=255)
                                                                                                                  atcatACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGt                                   >  2:1607180/1‑151 (MQ=255)
                                                                                                                   tcatACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGCtt                                  >  6:1158128/1‑151 (MQ=255)
                                                                                                                    catACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGttt                                 <  4:1212038/151‑1 (MQ=255)
                                                                                                                     atACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGtttt                                <  2:1659904/151‑1 (MQ=255)
                                                                                                                      tACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGttttt                               >  5:438071/1‑151 (MQ=255)
                                                                                                                       acacTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGttttt                               <  3:893052/150‑1 (MQ=255)
                                                                                                                       acacTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTa                              <  2:291960/151‑1 (MQ=255)
                                                                                                                       acacTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTa                              <  3:527709/151‑1 (MQ=255)
                                                                                                                       acacTAAATCAGTAACTTGGCAGCATGACCTTTAATGTCATAAGTAAATATTGATATGCTATAATCCCCGATCACTAAGGGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGttttt                               <  5:1693128/150‑1 (MQ=255)
                                                                                                                           tAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTg                          >  4:1681605/1‑151 (MQ=255)
                                                                                                                            aaaTCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTg                          <  6:1366234/150‑1 (MQ=255)
                                                                                                                               tCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAgg                      >  1:682052/1‑151 (MQ=255)
                                                                                                                                cAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAgg                      <  6:1658026/150‑1 (MQ=255)
                                                                                                                                cAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGt                     >  7:1914070/1‑151 (MQ=255)
                                                                                                                                cAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGt                     >  7:488554/1‑151 (MQ=255)
                                                                                                                                cAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGAAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGt                     <  3:2100869/151‑1 (MQ=255)
                                                                                                                                 aGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGtt                    >  1:1000548/1‑151 (MQ=255)
                                                                                                                                 aGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGtt                    <  6:2057008/151‑1 (MQ=255)
                                                                                                                                   tAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGTTCt                  >  6:1284129/1‑151 (MQ=255)
                                                                                                                                     aGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGTTCTgg                >  7:1267684/1‑151 (MQ=255)
                                                                                                                                      gTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGTTCTGGa               <  7:875031/151‑1 (MQ=255)
                                                                                                                                         ggCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGTTCTGGAAt             <  8:1389258/150‑1 (MQ=255)
                                                                                                                                             gcctCACCTTTAATGTCATAACTAAATATTGAAATGCTATAATCCCCGATCACTCACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGTTCTGGAATCgaga        <  6:975328/148‑1 (MQ=255)
                                                                                                                                               aTCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGTTCTGGAATCGAGAgg      >  1:344920/1‑151 (MQ=255)
                                                                                                                                               aTCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGTTCTGGAATCGAGAgg      >  5:1314511/1‑151 (MQ=255)
                                                                                                                                                  aCCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGTTCTGGAATCGAGAGGCt    >  3:2159003/1‑150 (MQ=255)
                                                                                                                                                  aCCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGTTCTGGAATCGAGAGGCTa   <  4:815211/151‑1 (MQ=255)
                                                                                                                                                    cTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGTTCTGGAATCGAGAGGCTaa  >  2:1903336/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
AGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTTAATGTCATAAGTAAATATTGAAATGCTATAATCCCCGATCACTAACCGTTCTTGTAGATCAGGGTTTATGAAATCATCATTATTTCTATAAAATTCATTTACGGCAAAAAGGTTTTTAACTGAAGGTTCTGGAATCGAGAGGCTAA  >  DH1/300187‑300484

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.