| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | DH1 | 225,412 | Δ5,109 bp | repeat_region‑mediated | hdeD–[slp] | hdeD, hdeA, hdeB, yhiD, dctR, slp, [slp] |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | DH1 | 225412 | 231677–230527 | 5116–6266 | 580 [3] | [324] 329 | hdeD–insH1 | hdeD, hdeA, hdeB, yhiD, dctR, slp, slp, insH1 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | DH1 | = 225411 | 3 (0.010) | 572 (1.190) | 239/300 | 0.0 | 99.5% | intergenic (‑14/+785) | gadE/hdeD | transcriptional regulator GadE/protein HdeD |
| ? | DH1 | 230533 = | NA (NA) | noncoding (7/1207 nt) | repeat_region | repeat region | |||||