| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | DH1 | 225,412 | Δ5,109 bp | repeat_region‑mediated | hdeD–[slp] | hdeD, hdeA, hdeB, yhiD, dctR, slp, [slp] |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | DH1 | 225412 | 231677–230527 | 5116–6266 | 580 [3] | [324] 329 | hdeD–insH1 | hdeD, hdeA, hdeB, yhiD, dctR, slp, slp, insH1 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | DH1 | = 225411 | 3 (0.010) | 572 (1.190) | 239/300 | 0.0 | 99.5% | intergenic (‑14/+785) | gadE/hdeD | transcriptional regulator GadE/protein HdeD |
| ? | DH1 | 230533 = | NA (NA) | noncoding (7/1207 nt) | repeat_region | repeat region | |||||
Only 100 of 580 total aligned reads displayed.
CAATGATAACCTTGAAGGGTTTATTGCCTACTTTTTTGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAACACTAATCAATACTTCAGATTTATCCATCACGC > DH1/225262‑225561 | cAATGATAACCTTGAAGGGTTTATTGCCTACTTTTTTGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTAACTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGATCCTTAGg > 6:201520‑M1/1‑150 (MQ=255) aaTGATAACCTTGAAGGGTTTATTGCCTACTTTTTTGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGgg > 7:1082917‑M1/1‑149 (MQ=255) aTGATAACCTTGAAGGGTTTATTGCCTACTTTTTTGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGgga < 1:1881607‑M1/151‑4 (MQ=255) gATAACCTTGAAGGTTTTATTGCCTACTTTTTTGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaa < 7:1241507‑M1/150‑5 (MQ=255) gATAACCTTGAAGGGTTTATTGCCTACTTTTTTGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaag < 3:847376‑M1/151‑6 (MQ=255) gATAACCTTGAAGGGTTTATTGCCTACTTTTTTGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaa < 5:447225‑M1/150‑5 (MQ=255) tAACCTTGAAGGGTTTATTGCCTACTTTTTTGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggt > 5:1631113‑M1/1‑144 (MQ=255) gAAGGGTTTATTGCCTACTTTTTTGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaaca < 7:1419930‑M1/151‑15 (MQ=255) aGGGTTTATTGCCTACTTTTTTGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaaca > 1:1121855‑M1/1‑135 (MQ=255) gTTTATTGCCTACTTTTTAGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATAATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaagctgcgaacaagtcc > 8:1227754‑M1/1‑132 (MQ=255) ttATTGCCTACTTTTTTGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccc < 4:1540819‑M1/150‑21 (MQ=255) ttGCCTACTTTTTTGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgat > 7:336365‑M1/1‑127 (MQ=255) cTTTTTTGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatg > 7:732899‑M1/1‑120 (MQ=255) tttttGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatc < 7:1693063‑M1/150‑33 (MQ=255) tttttGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatc > 8:1511538‑M1/1‑118 (MQ=255) tttGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcat < 5:1466983‑M1/150‑35 (MQ=255) tttGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCatt < 3:1771556/150‑1 (MQ=255) tGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtt > 2:853569‑M1/1‑114 (MQ=255) tGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtt > 5:1590165‑M1/1‑114 (MQ=255) tctGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTATAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtc > 1:1548362‑M1/1‑109 (MQ=255) ctGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat > 2:185649‑M1/1‑108 (MQ=255) tGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacacgtccctgatatgagatcatgtttgtcat > 6:876647‑M1/1‑107 (MQ=255) tGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc > 4:1833677‑M1/1‑107 (MQ=255) gACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat < 1:1260349‑M1/149‑44 (MQ=255) aCAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg < 1:3062‑M1/151‑47 (MQ=255) aCAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg < 1:1447758‑M1/151‑47 (MQ=255) gggAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag < 5:894775‑M1/151‑50 (MQ=255) gggAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag < 3:586840‑M1/151‑50 (MQ=255) ggAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagc > 3:1264776‑M1/1‑101 (MQ=255) tGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata < 2:12095‑M1/150‑55 (MQ=255) aTTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga > 7:1634334‑M1/1‑94 (MQ=255) ttttATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac > 8:725474‑M1/1‑92 (MQ=255) tATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 4:1699609‑M1/1‑89 (MQ=255) tATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgcagccatagaacaggg > 6:1073631‑M1/1‑89 (MQ=255) aTTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc > 5:239880‑M1/1‑85 (MQ=255) ttCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat < 4:388035‑M1/150‑68 (MQ=255) cGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGTATCTTTCGTGATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtgcctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca < 6:1524967‑M1/150‑70 (MQ=255) cGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat > 3:682563‑M1/1‑81 (MQ=255) gTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg < 8:1625272‑M1/151‑72 (MQ=255) gTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg > 3:394694‑M1/1‑80 (MQ=255) gTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaagtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg < 2:1245462‑M1/151‑72 (MQ=255) tATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc > 2:744336‑M1/1‑75 (MQ=255) tATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc > 5:841548‑M1/1‑75 (MQ=255) aTCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat > 3:1427983‑M1/1‑74 (MQ=255) tttCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatca > 7:459332‑M1/1‑71 (MQ=255) ttCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat < 6:1152098‑M1/147‑78 (MQ=255) cAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt < 5:1324401‑M1/151‑84 (MQ=255) gCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct < 7:573078‑M1/150‑88 (MQ=255) gCCAAAAGACCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt < 3:156376‑M1/151‑89 (MQ=255) ccAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc > 6:972505‑M1/1‑62 (MQ=255) ccAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc < 2:416397‑M1/151‑90 (MQ=255) ccAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc < 7:237941‑M1/151‑90 (MQ=255) aaaaGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc > 6:326157‑M1/1‑60 (MQ=255) aaaaGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc > 3:290916‑M1/1‑60 (MQ=255) aaaGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc < 7:941213‑M1/151‑93 (MQ=255) aaGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg > 6:1720380‑M1/1‑58 (MQ=255) aGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg > 2:1086648‑M1/1‑57 (MQ=255) gCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac > 6:1428605‑M1/1‑56 (MQ=255) cTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt > 4:1431149‑M1/1‑53 (MQ=255) gTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt < 2:1772046‑M1/149‑99 (MQ=255) aaaagaaaagAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa < 3:1115845‑M1/150‑102 (MQ=255) aaagaaaagaATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt > 1:918578‑M1/1‑48 (MQ=255) aaagaaaagaATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt > 6:1249388‑M1/1‑48 (MQ=255) aagaaaagaaTCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc < 8:88978‑M1/151‑105 (MQ=255) gaaaagaaTCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc > 3:495456‑M1/1‑45 (MQ=255) aaagaaTCTTTCGTCATGAGAAATATCTTAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca < 4:1033597‑M1/151‑109 (MQ=255) aagaaTCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcag < 8:343287‑M1/151‑110 (MQ=255) ttCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagc < 5:1857942‑M1/148‑115 (MQ=255) tCGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc < 3:1693130‑M1/150‑118 (MQ=255) cGTCATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcaggagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt > 4:728172‑M1/1‑32 (MQ=255) cATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcag < 5:586157‑M1/151‑123 (MQ=255) cATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcag < 4:312940‑M1/151‑123 (MQ=255) cATGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc > 2:1556586‑M1/1‑29 (MQ=255) aTGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga < 2:349514‑M1/151‑124 (MQ=255) aTGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc > 1:1635561‑M1/1‑28 (MQ=255) aTGAGAAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc > 4:217416‑M1/1‑28 (MQ=255) gagaAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacgttcgccgacagtgaattcagcagtaagcgccctcagacc > 1:486619‑M1/1‑26 (MQ=255) agaAAAATCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacca < 4:898850‑M1/151‑127 (MQ=255) aaaaaTCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccaga < 1:1024398‑M1/151‑129 (MQ=255) aaaaTCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa < 8:503180‑M1/151‑130 (MQ=255) aaaaTCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa < 7:1472707‑M1/151‑130 (MQ=255) aaTCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa < 6:540533‑M1/151‑132 (MQ=255) aaTCATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa < 4:588044‑M1/151‑132 (MQ=255) cATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattccgcagtaagcgccgtcagaccagaaaag > 8:1387241‑M1/1‑17 (MQ=255) cATAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagag < 1:790815‑M1/151‑135 (MQ=255) aTAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag > 5:1244052‑M1/1‑16 (MQ=255) tAACTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag > 4:1307381‑M1/1‑15 (MQ=255) aaCTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccttcagaccagaaaagagatt < 2:621434‑M1/151‑138 (MQ=255) aaCTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatt > 4:1132011‑M1/1‑14 (MQ=255) aaCTTGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatt < 8:1902909‑M1/151‑138 (MQ=255) ttGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc > 7:183447‑M1/1‑11 (MQ=255) ttGCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgattgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc > 1:638633‑M1/1‑11 (MQ=255) gCTCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 5:1077033‑M1/151‑143 (MQ=255) tCCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt > 8:1022997‑M1/1‑7 (MQ=255) ccTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc < 1:582657‑M1/151‑146 (MQ=255) ccTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc > 7:840691‑M1/1‑6 (MQ=255) tAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg > 1:1690244‑M1/1‑3 (MQ=255) tAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg > 3:1017327‑M1/1‑3 (MQ=255) gggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgca < 5:710585‑M1/151‑151 (MQ=255) gggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaacagattttcttgtcccgca < 6:61104‑M1/151‑151 (MQ=255) | CAATGATAACCTTGAAGGGTTTATTGCCTACTTTTTTGATCTCTGACAGGGAATTGATTTTTATCATTTCGTGATTATCTTTCAACTGCCAAAAGCCCTGTAAAAGAAAAGAATCTTTCGTCATGAGAAAAATCATAACTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAACACTAATCAATACTTCAGATTTATCCATCACGC > DH1/225262‑225561 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |