New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? DH1 = 1702500220 (0.390)343 (0.620) 193/292 1.5 61.7% noncoding (5/1205 nt) repeat_region repeat region
?DH1 1703700 = 211 (0.380)noncoding (1205/1205 nt) repeat_region repeat region

Only 100 of 571 total aligned reads displayed.

GCGGAAGAAATTAAAGAGTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTA  >  DH1/1702350‑1702649
                                                                                                                                                      |                                                                                                                                                     
 cggAAGAAATTAAAGAGTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAgg                                                                                                                                                      <  2:883091/151‑1 (MQ=255)
   gaagaaATTAAAGAGTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAggg                                                                                                                                                     >  7:1470311/1‑150 (MQ=255)
    aagaaATTAAAGAGTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttca                                                                                                                                                   <  5:9393‑M1/151‑5 (MQ=255)
    aagaaATTAAAGAGTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttc                                                                                                                                                    <  6:1484317‑M1/150‑4 (MQ=255)
    aagaaATTAAAGAGTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttc                                                                                                                                                    >  8:611861‑M1/1‑147 (MQ=255)
    aagaaATTAAAGAGTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGaa                                                                                                                                                   <  7:399640/151‑1 (MQ=255)
     agaaATTAAAGAGTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcac                                                                                                                                                  <  5:706439‑M1/151‑6 (MQ=255)
          ttAAAGAGTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTACTTTTGGCGATATTCCGTTAGttcacggcat                                                                                                                                             >  3:956564‑M1/1‑141 (MQ=255)
            aaaGAGTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGaa                                                                                                                                           <  7:1865810/151‑1 (MQ=255)
             aaGAGTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTAGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcactgcatgcc                                                                                                                                          >  2:1648101‑M1/1‑138 (MQ=255)
                 gTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGc                                                                                                                                      <  4:1936892/151‑1 (MQ=255)
                   tgtgTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgcctttta                                                                                                                                     <  3:1156984‑M1/150‑19 (MQ=255)
                    gtgtCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatt                                                                                                                                   >  4:1078984‑M1/1‑131 (MQ=255)
                      gtCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttattt                                                                                                                                  <  4:1581466‑M1/150‑22 (MQ=255)
                       tCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttct                                                                                                                                >  4:452388‑M1/1‑128 (MQ=255)
                         aGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctgg                                                                                                                              >  1:1495106‑M1/1‑126 (MQ=255)
                           aaTCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAAttg                                                                                                                            >  5:1653870/1‑150 (MQ=255)
                            aTCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtat                                                                                                                           >  2:2168372‑M1/1‑123 (MQ=255)
                              cATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatc                                                                                                                          <  1:2226842‑M1/150‑30 (MQ=255)
                               ataataTTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcgg                                                                                                                        >  7:131670‑M1/1‑120 (MQ=255)
                                taataTTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggt                                                                                                                       >  5:2029485‑M1/1‑119 (MQ=255)
                                      tcatgttGAATTAATACAGTGTCTGGTTAATGAAATAGAAACCTATATGGATGGTGTTCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCAGTTAGttaacggcatgccttttatttctgttataggtatcga                                                                                                                  >  2:1576475‑M1/4‑113 (MQ=255)
                                      tCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTg                                                                                                                  <  2:1404009/150‑1 (MQ=255)
                                           ttGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTc                                                                                                              >  1:1039713/1‑149 (MQ=255)
                                           ttGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTc                                                                                                              >  1:346217/1‑149 (MQ=255)
                                             gAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcatta                                                                                                           <  2:1264721‑M1/150‑45 (MQ=255)
                                              aaTTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattaca                                                                                                         <  7:1653971‑M1/151‑47 (MQ=255)
                                              aaTTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattac                                                                                                          >  1:983114‑M1/1‑105 (MQ=255)
                                                 tAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatt                                                                                                       <  7:517362/150‑1 (MQ=255)
                                                  aaTCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttc                                                                                                     >  1:1712779/1‑151 (MQ=255)
                                                  aaTCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcattt                                                                                                      <  8:1062149/150‑1 (MQ=255)
                                                      cAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTcatttcattt                                                                                                 >  7:1169698/1‑151 (MQ=255)
                                                       aGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaat                                                                                                <  8:416547‑M1/151‑56 (MQ=255)
                                                       aGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTcatttcatttg                                                                                                >  8:680126/1‑150 (MQ=255)
                                                       aGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCatttcatttc                                                                                                <  4:1225969/151‑1 (MQ=255)
                                                         tgtCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaatt                                                                                               >  1:1339181‑M1/1‑94 (MQ=255)
                                                          gtCGGGTTAATGAAATAGAAACCTATATGGATTGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGTCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATttcttc                                                                                             <  5:369925/151‑1 (MQ=255)
                                                            cGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctga                                                                                           <  6:974342‑M1/151‑61 (MQ=255)
                                                            cGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAt                                                                                           >  7:2218599/1‑151 (MQ=255)
                                                             gggTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttatggtatcggtatcgaagcattacaaaatgaaattctcac                                                                                          >  5:1447978‑M1/1‑90 (MQ=255)
                                                             gggTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATg                                                                                          <  7:712098/151‑1 (MQ=255)
                                                                  aaTGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatct                                                                                     <  3:1612626‑M1/151‑67 (MQ=255)
                                                                  aaTGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTg                                                                                      <  6:2243528/150‑1 (MQ=255)
                                                                  aaTGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTg                                                                                      <  3:2113249/150‑1 (MQ=255)
                                                                    tGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGc                                                                                   >  1:1961058/1‑151 (MQ=255)
                                                                     gAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttac                                                                                  <  5:1815783‑M1/151‑70 (MQ=255)
                                                                      aaaTAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttaca                                                                                 <  6:616102‑M1/151‑71 (MQ=255)
                                                                      aaaTAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTCGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtataggtatcgaagcattacaaaataaaattctgactatcttaa                                                                                  >  4:799166‑M1/1‑81 (MQ=255)
                                                                       aaTAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGa                                                                                <  3:844339/151‑1 (MQ=255)
                                                                            aaaCATATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttttt                                                                           <  3:620184/151‑1 (MQ=255)
                                                                             aaCCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAtttttt                                                                          >  5:1202334/1‑151 (MQ=255)
                                                                                  atatGGATGGTGTGCATTTGATATGCACCACTGCGAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGtgcacggcatgccttttttttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgaccta                                                                      <  6:1193649‑M1/150‑82 (MQ=255)
                                                                                  atatGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctat                                                                     <  6:1752919‑M1/151‑83 (MQ=255)
                                                                                     tggatggTGTGCATTTGACATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgtt                                                                  >  3:1894511‑M1/1‑66 (MQ=255)
                                                                                      ggatggTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttt                                                                 >  2:117460‑M1/1‑65 (MQ=255)
                                                                                       gatggTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgtttt                                                                >  4:950541‑M1/1‑64 (MQ=255)
                                                                                        atggTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttc                                                               >  4:221710‑M1/1‑63 (MQ=255)
                                                                                        atggTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttc                                                               >  1:786611‑M1/1‑63 (MQ=255)
                                                                                        atggTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttc                                                               <  6:813123‑M1/151‑89 (MQ=255)
                                                                                        atggTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAA‑‑GGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGc                                                             >  4:2166988/1‑151 (MQ=255)
                                                                                          ggTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttca                                                              <  8:1676307‑M1/150‑90 (MQ=255)
                                                                                          ggTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATg                                                              <  2:520170/150‑1 (MQ=255)
                                                                                           gtgtGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcaga                                                            <  1:867633‑M1/151‑92 (MQ=255)
                                                                                             gtgCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaag                                                          <  3:1494938‑M1/151‑94 (MQ=255)
                                                                                                cATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtc                                                        >  4:1484214‑M1/1‑55 (MQ=255)
                                                                                                   ttGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgc                                                    >  1:585168‑M1/1‑52 (MQ=255)
                                                                                                    tGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgc                                                    <  8:1247549‑M1/150‑100 (MQ=255)
                                                                                                     gATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgt                                                  <  8:21098‑M1/151‑102 (MQ=255)
                                                                                                       tatGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgtt                                                 >  8:1442073‑M1/1‑48 (MQ=255)
                                                                                                       tatGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCt                                                >  2:416712/1‑151 (MQ=255)
                                                                                                        atGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGCTATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTa                                               <  5:1719847/151‑1 (MQ=255)
                                                                                                        atGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttat                                               <  2:992901‑M1/151‑105 (MQ=255)
                                                                                                        atGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttat                                               >  5:350739‑M1/1‑47 (MQ=255)
                                                                                                        atGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCt                                                <  5:612326/150‑1 (MQ=255)
                                                                                                        atGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCt                                                <  2:59199/150‑1 (MQ=255)
                                                                                                          gCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAtt                                             <  3:403118/151‑1 (MQ=255)
                                                                                                              cacTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctc                                         <  7:82019‑M1/151‑111 (MQ=255)
                                                                                                               acTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctcg                                        <  8:1858544‑M1/151‑112 (MQ=255)
                                                                                                                  gCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGAcc                                       <  2:2015841/149‑1 (MQ=255)
                                                                                                                   ccAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGtt                                    <  3:1683987/151‑1 (MQ=255)
                                                                                                                     aaaGTGGATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctcgacctcg                                  >  2:764223‑M1/1‑34 (MQ=255)
                                                                                                                      aaGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttct                                 <  2:1739302/151‑1 (MQ=255)
                                                                                                                          ggATCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggggacctatgttttcagaagtcatgcgttatattctcgacctcggccc                              <  3:553786‑M1/150‑122 (MQ=255)
                                                                                                                            gtggtagTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggggacctatgttttcagaagtcatgcgttatattctcgacctcggccctac                           <  1:1583417‑M1/148‑125 (MQ=255)
                                                                                                                            aTCGTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctcgacctcggccctac                           <  8:802031‑M1/151‑125 (MQ=255)
                                                                                                                              cGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAtt                         >  7:1791439/1‑151 (MQ=255)
                                                                                                                               gTAGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctcgacctcggccctacggt                        <  6:1055274‑M1/151‑128 (MQ=255)
                                                                                                                               gTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAttt                        >  2:1955019/1‑151 (MQ=255)
                                                                                                                                 aGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctcgacctcggccctacggtg                       <  5:1282654‑M1/150‑129 (MQ=255)
                                                                                                                                 aGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctcgacctcggccctacggtg                       <  4:57871‑M1/150‑129 (MQ=255)
                                                                                                                                 aGTTTTGGCGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctcgacctcggccctacggtg                       >  1:111582‑M1/1‑22 (MQ=255)
                                                                                                                                   ttttGGCGATATTCCGTTAGGGAAGGTGCCAATAAGCGGGGATATTCTTCTCGGCTGACTCAGTCATATCATTTCTTCATGTTTGAGCCGATTTTATCTCCCGTAAATGCATTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAgc                    >  8:2226530/1‑150 (MQ=255)
                                                                                                                                       ggCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGtt                <  2:66812/151‑1 (MQ=37)
                                                                                                                                         cGATATTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctcgacctcggccctacggtgatgctgccg              <  1:678467‑M1/151‑138 (MQ=255)
                                                                                                                                             atTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctcgacctcggccctacggtgatgctgccgattg          <  6:350092‑M1/151‑142 (MQ=255)
                                                                                                                                             atTCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctcgacctcggccctacggtgatgctgccgatt           <  8:1985519‑M1/150‑141 (MQ=255)
                                                                                                                                               tCCGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctcgacctcggccctacggtgatgctgccgattgt         <  1:1244790‑M1/150‑143 (MQ=255)
                                                                                                                                                ccGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctcgacctcggccctacggtgatgctgccgattgtc        >  7:2090670‑M1/1‑7 (MQ=255)
                                                                                                                                                ccGTTAGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctcgacctcggccctacggtgatgctgccgattgtc        <  3:29365‑M1/150‑144 (MQ=255)
                                                                                                                                                     aGttcacggcatgccttttatttctggtatcggtatcgaagcattacaaaataaaattctgactatcttacaggggtgacctatgttttcagaagtcatgcgttatattctcgacctcggccctacggtgatgctgccgattgtcatcatt  <  4:680872‑M1/151‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
GCGGAAGAAATTAAAGAGTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTA  >  DH1/1702350‑1702649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.