| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,156,257 | (CCA)2→1 | coding (594‑596/930 nt) | yqhG → | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3156256 | 1 (0.010) | 118 (0.770) | 80/144 | 0.4 | 99.2% | coding (593/930 nt) | yqhG | hypothetical protein |
| ? | NC_000913 | 3156260 = | 1 (0.010) | coding (597/930 nt) | yqhG | hypothetical protein | |||||
Only 100 of 129 total aligned reads displayed.
CTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3156179‑3156256‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCA > NC_000913/3156260‑3156334 CTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGC < 1:1066737/76‑1 TTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCA < 1:988533/76‑1 TTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCA < 1:574790/76‑1 TGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAG > 1:5648055/1‑76 GTTGCCGACCTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGG < 2:948248/76‑1 GTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGG < 1:107886/76‑1 GTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGGGGTTTCCGACTCTTACCCCCAGG > 2:5350253/1‑76 TTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGC < 1:2090279/76‑1 TGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACACCCAGGCG > 2:938951/1‑76 GCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGATTCCGACTCTTACCGCCACGCGG > 2:793556/1‑76 CCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGGGGT < 2:191753/76‑1 CCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGT > 1:4688009/1‑76 CCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGT < 2:3828033/76‑1 CGAACTCTTTTAACATATTGCTGATTATAGCTGGCGGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTT < 2:347169/76‑1 gacCTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTA < 2:3245116/73‑1 GAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTA < 1:5598068/76‑1 GAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTA > 1:954144/1‑76 GAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTA > 2:5167531/1‑76 GAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGGTA > 2:3280798/1‑76 AACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAA < 1:2699000/76‑1 AACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAA > 1:4589948/1‑76 ACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAAT > 2:2681135/1‑76 CTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATG < 1:1943437/76‑1 CTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCC < 2:1901213/76‑1 TTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGGTAATGCat > 2:3740215/1‑74 TTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTT < 2:5033851/76‑1 TGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC < 1:1012634/76‑1 GAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑T > 2:4884296/1‑76 GAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑T < 2:436364/76‑1 GAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑T < 1:3499564/76‑1 CATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATA > 2:3680299/1‑76 ATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAA > 2:3182457/1‑76 ATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAA < 1:2756619/76‑1 TATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAA > 1:857225/1‑76 TATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAA < 1:1680172/76‑1 TATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAA > 1:5079147/1‑76 TGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACC < 2:2178469/76‑1 GCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGGTAATGCCTTC‑TATAAAAACA > 1:659253/1‑76 CTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCAC > 2:3406298/1‑76 CTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAAACAC > 1:4915977/1‑76 TGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACC > 1:1643842/1‑76 GATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCT < 2:3626989/76‑1 GATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCT > 2:119563/1‑76 TATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCA > 2:564577/1‑76 TATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCA > 2:200224/1‑76 TATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCCTCA > 2:5258811/1‑76 TATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGG‑TAAAGCCTTCTTTTAAAACCCCCTTCA > 2:1030759/1‑76 TAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAG < 1:2007513/76‑1 TAGCTGGCCGTGGACGTGGGTGGGTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAG > 1:3746878/1‑76 GCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGAC < 2:4951960/76‑1 CTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACG < 1:3419472/76‑1 CTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACG < 1:5211487/76‑1 CTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAAACACCCTCAAGACG > 1:2541709/1‑76 GGCGGTGGACGTGGGTGTTTTCCGCCTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGC < 1:2803824/76‑1 GGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGC > 1:1492931/1‑76 GCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCC > 1:3262305/1‑76 GCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCC > 1:499016/1‑76 CCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCA > 2:74498/1‑76 GTGGCCGTGGGTGGTTCCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAAT < 1:1924763/76‑1 GTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAAa > 1:5225643/1‑75 GTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGG > 2:870853/1‑71 GTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAAT > 2:597593/1‑43 GTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAAT < 1:597593/43‑1 GACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAAT > 1:364872/1‑76 GACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAAT < 1:3733039/76‑1 GTGGGTGGTTTCCGACCCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCC > 1:2329686/1‑76 TGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCG > 1:3292502/1‑76 GTGGTTTCCGCCTCTTCCCGCCAGGCGGTTAGTGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATG < 2:2477267/76‑1 TGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGA > 2:736317/1‑76 GTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAcg > 2:507141/1‑74 TTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGA > 2:2920833/1‑76 tCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATAT > 2:656019/2‑76 CCGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATAT < 2:3746878/76‑1 CGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATG < 2:4148946/76‑1 CGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATG < 2:1453774/76‑1 CGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATG > 2:4677282/1‑76 CGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATAT < 1:2266971/75‑1 CGACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATAT > 2:2266971/1‑75 GACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGa > 2:1072668/1‑75 GACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGC > 2:1229602/1‑76 ctTCTTACCGCCAGGCGGTAAATGCCTTC‑TATAAGACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCc < 1:5426960/74‑2 ACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCA > 1:3850143/1‑76 ACTCTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTAAAGACGGACAATAATCCCGATGAAGATATGCA > 1:138967/1‑76 CTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAAT > 2:3239961/1‑76 CTTACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAAT > 1:2894893/1‑76 TACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAG > 1:3225144/1‑76 TACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAG > 1:5311851/1‑76 TACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAG < 1:4280478/76‑1 ACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGA > 2:5327533/1‑76 ACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGA > 1:3912877/1‑76 ACCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGA < 1:567039/76‑1 CCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAA > 2:4368507/1‑76 CCGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAA < 2:5798338/76‑1 CGCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAAC < 1:301334/76‑1 GCCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACG > 1:4621084/1‑76 CAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGC < 2:4688008/76‑1 CAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGC > 2:4136804/1‑76 CAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGC > 1:4402284/1‑76 CAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGC < 1:1864658/76‑1 AGGCGGTTAATGCCTTC‑TATAAAACCCCCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCA < 2:284100/76‑1 CTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3156179‑3156256‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCA > NC_000913/3156260‑3156334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |