| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,156,257 | (CCA)2→1 | coding (594‑596/930 nt) | yqhG → | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3156256 | 1 (0.010) | 118 (0.770) | 80/144 | 0.4 | 99.2% | coding (593/930 nt) | yqhG | hypothetical protein |
| ? | NC_000913 | 3156260 = | 1 (0.010) | coding (597/930 nt) | yqhG | hypothetical protein | |||||
Only 100 of 131 total aligned reads displayed.
TGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCACCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAA > NC_000913/3156185‑3156335 | tgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccag > 1:5648055‑M2/76‑76 (MQ=255) gttgccgacctctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccagg < 2:948248‑M2/2‑1 (MQ=255) gttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccagg < 1:107886‑M2/2‑1 (MQ=255) gttgccgaactctttgaacatattgctgattatagctggccgtggacgtggggggtttccgactcttacccccagg > 2:5350253‑M2/75‑76 (MQ=255) ttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGc < 1:2083141‑M2/3‑1 (MQ=255) ttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGc < 1:2090279‑M2/3‑1 (MQ=255) tgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttacacccaGGCg > 2:938951‑M2/73‑76 (MQ=255) gccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCgg > 1:3795688‑M2/72‑76 (MQ=255) gccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggattccgactcttaccgccaCGCgg > 2:793556‑M2/72‑76 (MQ=255) ccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGGGGt < 2:191753‑M2/6‑1 (MQ=255) ccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGt > 1:4688009‑M2/71‑76 (MQ=255) ccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGt < 2:1708647‑M2/6‑1 (MQ=255) cgaactcttttaacatattgctgattatagctggcggtggacgtgggtggtttccgactcttaccgccaGGCGGtt < 2:347169‑M2/7‑1 (MQ=255) gacctctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTa < 2:3245116‑M2/8‑1 (MQ=255) gaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTa > 2:5167531‑M2/69‑76 (MQ=255) gaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTa > 1:954144‑M2/69‑76 (MQ=255) gaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTa < 1:5598068‑M2/8‑1 (MQ=255) aactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTaa > 1:4589948‑M2/68‑76 (MQ=255) aactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTaa < 1:2699000‑M2/9‑1 (MQ=255) ctctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATg < 1:1943437‑M2/11‑1 (MQ=255) ctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGcc < 2:1901213‑M2/13‑1 (MQ=255) tttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGGTAAtgcat > 2:3740215‑M2/63‑74 (MQ=255) ttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGGTAATGCCtt > 2:3736435‑M2/62‑76 (MQ=255) tgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTc < 1:1012634‑M2/16‑1 (MQ=255) gaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑t > 2:4884296‑M2/60‑76 (MQ=255) gaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑t < 1:3499564‑M2/17‑1 (MQ=255) aacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGCTAATGTCCTC‑ta > 1:2341175‑M2/59‑76 (MQ=255) acatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGCTAATGCCTTC‑tat > 2:4921496‑M2/58‑76 (MQ=255) catattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑tata > 2:3680299‑M2/57‑76 (MQ=255) atattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATaa < 1:2756619‑M2/21‑1 (MQ=255) tattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATaaa > 1:5079147‑M2/55‑76 (MQ=255) tattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATaaa < 1:1680172‑M2/22‑1 (MQ=255) tgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAacc < 2:2178469‑M2/25‑1 (MQ=255) gctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGGTAATGCCTTC‑TATAAAaaca > 1:659253‑M2/51‑76 (MQ=255) ctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAaccac > 2:3406298‑M2/50‑76 (MQ=255) ctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAaacac > 1:4915977‑M2/50‑76 (MQ=255) tgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAaccacc > 1:1643842‑M2/49‑76 (MQ=255) gattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCt > 2:119563‑M2/48‑76 (MQ=255) attatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCtt < 1:1741451‑M2/30‑1 (MQ=255) tatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCa > 2:200224‑M2/45‑76 (MQ=255) tatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGG‑TAAAGCCTTCTTTTAAAACCCCCTTCa > 2:1030759‑M2/45‑76 (MQ=255) tagctggccgtggacgtgggtgggttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAg > 1:3746878‑M2/43‑76 (MQ=255) gctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGAc < 2:4951960‑M2/36‑1 (MQ=255) ctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACg < 1:5211487‑M2/37‑1 (MQ=255) ctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAAACACCCTCAAGACg > 1:2541709‑M2/40‑76 (MQ=255) tggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACgg > 1:3239013‑M2/39‑76 (MQ=255) gccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGcc > 1:499016‑M2/37‑76 (MQ=255) gccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGcc > 1:3262305‑M2/37‑76 (MQ=255) ccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCa > 2:74498‑M2/36‑76 (MQ=255) gtggccgtgggtggttcccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCaat < 1:1924763‑M2/43‑1 (MQ=255) gtggacgtgggtggtttccgactcttaccgccaGGCGGTTAAt > 2:597593‑M2/34‑43 (MQ=255) gtggacgtgggtggtttccgactcttaccgccaGGCGGTTAAt < 1:597593‑M2/10‑1 (MQ=255) gtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACgg < 1:870853‑M2/38‑1 (MQ=255) gtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACgg > 2:870853‑M2/34‑71 (MQ=255) gtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCcaaa > 1:5225643‑M2/34‑75 (MQ=255) gacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCaataat < 1:3733039‑M2/46‑1 (MQ=255) gacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCaataat > 2:3237905‑M2/31‑76 (MQ=255) cgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATcc > 2:3987468‑M2/29‑76 (MQ=255) tgggtggtttccgcctcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAAtccca < 2:5196497‑M2/50‑2 (MQ=255) tgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCg > 1:3292502‑M2/27‑76 (MQ=255) gggtggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGa < 1:2883818‑M2/51‑1 (MQ=255) gtggtttccgcctcttcccgccaGGCGGTTAGTGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATg < 2:2477267‑M2/53‑1 (MQ=255) tggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGa > 2:736317‑M2/23‑76 (MQ=255) ggtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAACCCACCTTCAAGACGGCCAATAATCCCGATGaa < 1:5545924‑M2/55‑1 (MQ=255) gtttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGAtgacg > 2:507141‑M2/21‑74 (MQ=255) tttccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGa > 2:2920833‑M2/20‑76 (MQ=255) tcgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGatat > 2:656019‑M2/17‑76 (MQ=255) ccgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGatat < 2:3746878‑M2/60‑1 (MQ=255) ccgactcttaccgccaGGCGGTTAATGACTGC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGatat > 2:2782373‑M2/17‑76 (MQ=255) cgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCGAGACGGCCAATAATCCCGATGAAGATATg > 1:1414365‑M2/16‑76 (MQ=255) cgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGatat < 1:2266971‑M2/60‑1 (MQ=255) cgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGatat > 2:2266971‑M2/16‑75 (MQ=255) cgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATg > 2:4677282‑M2/16‑76 (MQ=255) cgactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATg < 2:4148946‑M2/61‑1 (MQ=255) gactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATAtga > 2:1072668‑M2/15‑75 (MQ=255) gactcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGc > 2:1229602‑M2/15‑76 (MQ=255) actcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCa > 1:3850143‑M2/14‑76 (MQ=255) actcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTAAAGACGGACAATAATCCCGATGAAGATATGCa > 1:138967‑M2/14‑76 (MQ=255) tcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCaaa < 2:4589947‑M2/65‑1 (MQ=255) tcttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCAACTTCAAGACGGCCAATAATCCCGATGAAGATATGcaag > 2:5426959‑M2/12‑75 (MQ=255) cttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAAt > 1:2894893‑M2/11‑76 (MQ=255) cttaccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAAt > 2:3239961‑M2/11‑76 (MQ=255) taccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAg < 1:4280478‑M2/68‑1 (MQ=255) taccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAg > 1:5311851‑M2/9‑76 (MQ=255) accgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGa < 1:567039‑M2/69‑1 (MQ=255) accgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGa > 1:3912877‑M2/8‑76 (MQ=255) accgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGa > 2:5327533‑M2/8‑76 (MQ=255) ccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGaa < 2:5798338‑M2/70‑1 (MQ=255) ccgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGaa > 2:4368507‑M2/7‑76 (MQ=255) cgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAAc < 2:3340811‑M2/71‑1 (MQ=255) cgccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAAc < 1:301334‑M2/71‑1 (MQ=255) gccaGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACg > 1:4621084‑M2/5‑76 (MQ=255) caGGCGGTTACGGCCTTC‑TATAAAACCACCCTCAAGACCGCCCATAACCCCGATTAAGACATGCCAATAGAACGGc > 1:3597330/1‑76 (MQ=255) caGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGc > 2:4136804‑M2/3‑76 (MQ=255) caGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGc > 1:3591174‑M2/3‑76 (MQ=255) caGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGc < 1:1864658‑M2/74‑1 (MQ=255) caGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGc > 1:4402284‑M2/3‑76 (MQ=255) aaGGCGGGTAAGGCTTTC‑TATAAAAGCACCTTCAAGACGGCCAATCATCCTGCTGCAGATATTCAAATAGAACGGc > 1:670871/2‑76 (MQ=255) aGGCGGTTAATGCCTTC‑TATAAAACCCCCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCa < 2:284100‑M2/75‑1 (MQ=255) ggCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCaa > 2:5184122/1‑76 (MQ=255) | TGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCACCAGGCGGTTAATGCCTTC‑TATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAA > NC_000913/3156185‑3156335 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |