| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 244129 = | 174 (1.090) | 160 (1.160) +ACTTCGCCCA |
50/130 | 1.9 | 51.7% | intergenic (+8/‑198) | gmhA/yafJ | phosphoheptose isomerase/putative amidotransferase |
| ? | NC_000913 | 757626 = | 172 (1.080) | coding (715/717 nt) | sdhB | succinate dehydrogenase iron sulfur protein | |||||
Only 100 of 212 total aligned reads displayed.
ATAAGACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/244203‑244129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAACCGTAGGCCTGATAAGACGCGCA‑AGCGTCGCATCAGGCA > NC_000913/757626‑757668 |||||||||| ATAAGACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACA < 1:5611887/76‑1 TAAGACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACAC < 1:418949/76‑1 TAAGACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACAC < 1:916156/76‑1 AAGACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACT < 2:3437568/76‑1 AAGACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACT < 1:3162772/76‑1 AGACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTCCACTT > 2:4774500/1‑76 AGACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTT < 1:4314379/76‑1 AGACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTT > 1:1870768/1‑76 GACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTC < 1:5745033/76‑1 GACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTC < 1:2435992/76‑1 ACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCc > 2:5408160/1‑75 CGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGC > 2:1636092/1‑76 CGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGC < 2:2449415/76‑1 GCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCC > 2:4408060/1‑76 GCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCC > 1:778433/1‑76 GCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACCTCGCC > 2:3512872/1‑76 GCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGGCTTATCCGGTCTACACTTCGCC > 1:5510219/1‑76 CGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCC < 1:4896208/76‑1 CGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCC > 1:878050/1‑76 CGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCC < 1:3549873/76‑1 CGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCC > 1:3709938/1‑76 GTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCA > 1:5455501/1‑76 GTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCA < 1:1523212/76‑1 GTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCA < 1:3237579/76‑1 GTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCA > 1:2317960/1‑76 CAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATA < 1:630925/76‑1 CAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATA < 2:3982902/76‑1 CAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACCTCGCCCATA > 2:2150569/1‑76 CAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGAGTAAACGTCTTATCAGCTCTACACTTCGCCCATc > 2:3227734/1‑75 atCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAA > 2:1444664/3‑76 AGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAA > 1:1086973/1‑76 AGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAA > 2:2215267/1‑76 AGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAA < 2:2365261/76‑1 nGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCCTCAAC > 1:2077230/2‑76 CGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAAC < 1:3311901/76‑1 GTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCGCCTAAACC > 1:3382939/1‑76 GTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACC > 2:2956899/1‑76 GTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACC > 2:2859987/1‑76 GTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACC > 2:4323171/1‑76 GTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACC < 1:713787/76‑1 GTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACC > 1:537748/1‑76 TCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCG > 2:4477706/1‑76 TCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCG > 1:3462139/1‑76 CGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGT > 1:4512151/1‑76 CGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGCCCACACTTCCCCCATAAACCGc > 2:5637335/1‑75 GCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGca > 2:889972/1‑74 GCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTA < 1:1158480/76‑1 GCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTA > 1:4131300/1‑76 GCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTA > 1:1618753/1‑76 GCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTA < 1:985542/76‑1 CATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTcg > 2:5814405/1‑74 CATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAG < 2:3315800/76‑1 CATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAG > 2:4238367/1‑76 CATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAG > 1:1290973/1‑76 TCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGC < 1:4817264/76‑1 CAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCC > 2:2733854/1‑76 CAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCC < 2:4585791/76‑1 CAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCC > 1:820254/1‑76 CAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCC > 1:519377/1‑76 AGGCGTCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTATGCCT < 2:5788765/76‑1 AGGCATCAGCGCACAGAGGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCATAGGCCT < 2:5529433/76‑1 AGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCT > 1:5180846/1‑76 AGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCT > 2:3755237/1‑76 AGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCT > 1:5234861/1‑76 GGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTG < 2:3462139/76‑1 GGCATAAGCGCACAAATGCCGGATGCGGAGTAAACGTATTATCCGGTCTACACTTCGCCCATAAACCGCAGGCCTG > 1:3798895/1‑76 GCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGA < 1:5263761/76‑1 CATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGAT < 2:2266086/76‑1 CATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGAT > 2:2126806/1‑76 agCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATA > 2:5844891/3‑76 ATCTGCGCACAACTGCCGGATGCGGCGTAAACGTCTTATCCGGTCTGCACGTCGCCCATAAGCCGTAGGCCTGATA < 1:1583874/76‑1 ATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATA > 1:2930923/1‑76 TCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAA < 1:5483971/76‑1 CAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAG < 2:2598232/76‑1 CAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAG > 1:1413066/1‑76 CAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAG > 2:3030060/1‑76 cGCGCACAAATGCGGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGA < 2:1313756/75‑1 GCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGAC > 1:4373730/1‑76 GCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGAC > 2:4715838/1‑76 GCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGAC > 1:5077695/1‑76 GCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGAC < 2:3577314/76‑1 CGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACG < 2:4309233/76‑1 CGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACG > 1:2134025/1‑76 CGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACG < 1:4116677/76‑1 CGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACG < 1:3943617/76‑1 GCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACGC < 1:1785966/76‑1 GCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACGC > 2:4836859/1‑76 GCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACGC < 1:1374229/76‑1 GCACAAATGCCCGATGCGGCGTAAACGGCCTATCCGGCCTACACTTCGCCCATAAACCGTAGACCTGACAAGACGC > 1:2587534/1‑76 CACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACGCG < 2:2401469/76‑1 ACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACGCGC > 2:2662534/1‑76 CAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACGCGCA > 2:51397/1‑76 CAAATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACGCGCA < 1:2529258/76‑1 AATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACGCGCAta > 1:4543123/1‑74 AATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACGCGCAta < 2:1097706/76‑3 AATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACGCGCAta < 1:5029922/76‑3 AATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACGCGCAta < 2:1867994/76‑3 AATGCCGGATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGTAGGCCTGATAAGACGCGCAta > 2:754555/1‑74 ATGCGGCGTAAACGTCTTATCCGGTCTACACTTCGCCCATAAACCGCAGGCCTGATAAGACGCGCACAGCGTCGCA > 1:143204/1‑76 GTAAACGTCTTATCCGGGCGACACTTCGCCCATAAACCGTAGGCCTGATAAGACGCGCATAGCGGCGCTTCAGGCA > 2:4921122/1‑76 |||||||||| ATAAGACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGCCGGATGCGGCGTAAACGTCTTATCCGGCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/244203‑244129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAACCGTAGGCCTGATAAGACGCGCA‑AGCGTCGCATCAGGCA > NC_000913/757626‑757668 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |