| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 244129 = | 174 (1.090) | 160 (1.160) +ACTTCGCCCA |
50/130 | 1.9 | 51.7% | intergenic (+8/‑198) | gmhA/yafJ | phosphoheptose isomerase/putative amidotransferase |
| ? | NC_000913 | 757626 = | 172 (1.080) | coding (715/717 nt) | sdhB | succinate dehydrogenase iron sulfur protein | |||||
Only 100 of 335 total aligned reads displayed.
AGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCC > NC_000913/757551‑757701 | tcagcgtcgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccat < 1:4133488‑M2/1‑1 (MQ=255)tcagcgtcgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccat < 1:1522548‑M2/1‑1 (MQ=255)tcagcgtcgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccat < 1:3456559‑M2/1‑1 (MQ=255) cagcgtcgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTa < 2:3405416‑M2/2‑1 (MQ=255) agcgtcgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTaa > 1:1086973‑M2/74‑76 (MQ=255) agcgtcgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTaa < 1:983016‑M2/3‑1 (MQ=255) agcgtcgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTaa > 1:5187936‑M2/74‑76 (MQ=255) agcgtcgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTaa > 1:1623506‑M2/74‑76 (MQ=255) gtATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTaaa < 2:1969148/76‑1 (MQ=255) cgtcgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAAc < 1:3311901‑M2/5‑1 (MQ=255) gtcgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAAcc < 1:713787‑M2/6‑1 (MQ=255) gtcgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAAcc < 1:5338090‑M2/6‑1 (MQ=255) gtcgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAAcc < 1:1607903‑M2/6‑1 (MQ=255) gtcgcatcaggcatcagcgcacaaatgccggatgaggcgtaaacgtcttatccggtctacacttcgcccaTAAAcc > 1:436522‑M2/71‑76 (MQ=255) ccgTCGGAATGGGCTGAACCCGACGCGCGCCATCGGCCATCTCAAGTCGATGTTGTTGCAACGTAATGCGTAAAcc < 1:4240615/74‑1 (MQ=255) aTGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAAcc < 2:2902679/76‑1 (MQ=255) tcgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCg > 1:1103972‑M2/70‑76 (MQ=255) gcgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgccttatccggtctacacttcgcccaTAAACCg < 2:246889‑M2/7‑1 (MQ=255) cgcatcatgcatcagcgcacaaatgccggattcggcgtaaacgtcttatccggtctccacttcgcccaTAAACCGt < 2:4430898‑M2/8‑1 (MQ=255) cgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGt > 1:4512151‑M2/69‑76 (MQ=255) cgcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggcccacacttcccccaTAAACcgc > 2:5637335‑M2/69‑75 (MQ=255) gcatcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTa < 1:1158480‑M2/9‑1 (MQ=255) ccGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGTAACGTAATGCGTAAACCGTAg < 1:2962853/76‑1 (MQ=255) catcaggcatcagcgcacaaatgccggatgcggcgtaaacgtcctatccggtctacacttcgcccaTAAACCGTAg > 2:1013672‑M2/67‑76 (MQ=255) cGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATACCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAgg > 2:14234/1‑76 (MQ=255) gAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGc > 1:2080145/1‑76 (MQ=255) caggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGcc < 2:2781004‑M2/13‑1 (MQ=255) aggcgtcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTATGCCt < 2:5788765‑M2/14‑1 (MQ=255) aggcatcagcgcacagaggccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCATAGGCCt < 2:5529433‑M2/14‑1 (MQ=255) aggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCt > 2:3558364‑M2/63‑76 (MQ=255) aggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCt < 1:5130001‑M2/14‑1 (MQ=255) aggcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCt > 2:3755237‑M2/63‑76 (MQ=255) ggcataagcgcacaaatgccggatgcggagtaaacgtattatccggtctacacttcgcccaTAAACCGCAGGCCTg > 1:3798895‑M2/62‑76 (MQ=255) gcatcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGa < 1:2236562‑M2/16‑1 (MQ=255) gggtGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGAt < 2:1038202/73‑1 (MQ=255) ggCTGACCCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGAt < 2:811193/76‑1 (MQ=255) ggCTGACCCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGAt < 1:672881/76‑1 (MQ=255) catcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGAt < 2:2266086‑M2/17‑1 (MQ=255) gCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATa < 2:3614898/76‑1 (MQ=255) atcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATa < 2:2974763‑M2/18‑1 (MQ=255) atcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATa > 1:2578430‑M2/59‑76 (MQ=255) agcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATa > 2:5844891‑M2/59‑76 (MQ=255) tcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATaa < 1:569386‑M2/19‑1 (MQ=255) tcagcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATaa < 1:5483971‑M2/19‑1 (MQ=255) cagcgcacaaatgccggatgcggcgtaagcgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAg < 2:3444543‑M2/20‑1 (MQ=255) gAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGa > 1:4779086/1‑76 (MQ=255) cgcgcacaaatgcgggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGa < 2:1313756‑M2/21‑1 (MQ=255) gcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGAc < 1:3717828‑M2/22‑1 (MQ=255) gcgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGAc > 2:4715838‑M2/55‑76 (MQ=255) cgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGAcg < 2:4309233‑M2/23‑1 (MQ=255) cgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGAcg > 1:2134025‑M2/54‑76 (MQ=255) cgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGAcg < 1:4116677‑M2/23‑1 (MQ=255) cgcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGAcg > 2:2613907‑M2/54‑76 (MQ=255) aCCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGGcg > 1:4427201/1‑76 (MQ=255) gcacaagtgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGAcgc < 1:2791392‑M2/24‑1 (MQ=255) gcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGAcgc > 2:4836859‑M2/53‑76 (MQ=255) gcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGAcgc < 1:1785966‑M2/24‑1 (MQ=255) gcacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGAcgc > 2:866835‑M2/53‑76 (MQ=255) cccGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGAcgc < 1:5800445/76‑1 (MQ=255) ccGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGAcgcg < 2:1087806/76‑1 (MQ=255) ccGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGAcgcg > 2:4911502/1‑76 (MQ=255) cacaaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGAcgcg < 2:2401469‑M2/25‑1 (MQ=255) gACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCa > 2:2081506/1‑76 (MQ=255) caaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGACGCGCa > 2:51397‑M2/50‑76 (MQ=255) aaatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGACGCGcat > 2:3048499‑M2/49‑75 (MQ=255) aatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGACGCgcata < 1:5029922‑M2/29‑3 (MQ=255) aatgccggatgcggcgtaaacgtcttatccggtctacacttcgcccaTAAACCGTAGGCCTGATAAGACGCgcata < 2:1867994‑M2/29‑3 (MQ=255) gcgcgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGc > 2:2813129/1‑76 (MQ=255) gcgcgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGc < 1:14234/76‑1 (MQ=255) cgcgcCATCGGCCATATCAAGTCGATGTTGTTGCATCGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCg < 2:4951944/76‑1 (MQ=255) cgcgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCg > 1:3187297/1‑76 (MQ=255) cgcgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCg > 2:548826/1‑76 (MQ=255) gcgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGt < 2:5502710/76‑1 (MQ=255) cgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAATCGTc < 1:3664735/76‑1 (MQ=255) cgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTc < 1:1964359/76‑1 (MQ=255) ccATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGc > 1:2189948/1‑76 (MQ=255) cATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCa < 1:145233/76‑1 (MQ=255) aTCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCac > 1:782413/1‑75 (MQ=255) tCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATc < 2:1675628/76‑1 (MQ=255) gCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAgg < 1:1301240/76‑1 (MQ=255) gCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAgg < 1:3132701/76‑1 (MQ=255) cATATCAAGGCGAGGGTGGTGCAACGTAATGCGGAAACAGTAGGACCGACAAGACGCGCAAACGACGCATCCGGCa > 1:1230242/1‑76 (MQ=255) atatCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCaa > 2:3224561/1‑76 (MQ=255) atCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAcc > 1:2388467/1‑76 (MQ=255) aaGTCGATGTTGTTGCAACGTAAGGCGTAAACCGTAGGCCTGATAAGACGCGCACGCGTCGAATACGGCAAcccga > 2:5280851/1‑73 (MQ=25) gTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGc < 2:4248570/76‑1 (MQ=255) gTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGc < 1:561060/76‑1 (MQ=255) tCGAGGTTGTTTCATCGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGcc < 1:893113/76‑1 (MQ=25) aTGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGa < 2:4612295/76‑1 (MQ=255) aTGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGa > 1:3390987/1‑76 (MQ=255) ttgCAACGTAATGCGTAAGCCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATgcggc < 1:1017924/76‑1 (MQ=255) ttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATgcggc < 1:2502216/76‑1 (MQ=255) gCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGt < 2:4156137/76‑1 (MQ=255) cAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTg < 1:2667566/76‑1 (MQ=255) aaCGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGa > 2:5051711/1‑76 (MQ=255) aCGTAATGCGCAAACCGGAGGACTGATAAGACGCGCAAGCGTCGCATCAGCCAACCAGAGCCGGATGCGGAGAGaa > 1:4844107/1‑76 (MQ=21) tAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGc < 1:541887/76‑1 (MQ=255) aaTGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGcc > 1:2045260/1‑76 (MQ=255) gCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTa > 2:1500946/1‑76 (MQ=255) tAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTCATcc > 2:2176510/1‑76 (MQ=255) | AGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCC > NC_000913/757551‑757701 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |