| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 279335 | NA (NA) | 135 (0.850) | 78/150 | 0.6 | 30.0% | coding (252/339 nt) | b4505 | hypothetical protein |
| ? | NC_000913 | 370982 = | 315 (1.980) | coding (535/882 nt) | mhpC | 2‑hydroxy‑6‑ketonona‑2,4‑dienedioic acid hydrolase | |||||
Only 100 of 135 total aligned reads displayed.
CGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/279261‑279335‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCG > NC_000913/370982‑371056 CGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAA < 2:2002261/76‑1CGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAA > 1:3182534/1‑76CGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAA < 2:1713601/76‑1CGAGAAAGACACTGAAGTCCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAA > 1:5438953/1‑76 GAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAAT < 2:863616/76‑1 GAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAAT > 2:5232540/1‑76 GAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAAT < 2:4240787/76‑1 AGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATG < 1:2666399/76‑1 AAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGA < 2:3292379/76‑1 AAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGAT > 2:4799300/1‑76 AAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGAT < 2:3467582/76‑1 AAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGAT < 2:4980011/76‑1 AGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATA > 2:1769790/1‑76 GACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATAT < 1:5688037/76‑1 GACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATAT < 2:3955249/76‑1 ACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATC < 1:4583156/76‑1 ACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGCGTTGCATTGACAGATTGAATCTACAATGGATCTCTT > 2:933054/1‑76 CTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTC > 1:3185387/1‑76 AAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTT > 2:4030809/1‑76 AGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTT > 2:657331/1‑76 GTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTT < 2:3720102/76‑1 TTCAAAACACCGAAAGAGACAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTT < 1:5757014/76‑1 gCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTG < 2:2019372/75‑1 TCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTG < 2:1997935/76‑1 TCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTG < 1:4799301/76‑1 CAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGA < 1:3863943/76‑1 CAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGA < 1:5083019/76‑1 AAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATCGATATATTCGTTCTTGAT > 2:3271301/1‑76 AAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATA < 1:4030810/76‑1 AACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATAC > 2:1377160/1‑76 AACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATAC < 1:1132520/76‑1 AACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATAC < 1:4703383/76‑1 AACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATACCTTCGTTTTTGATAC > 2:173684/1‑76 CACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCA < 2:3213778/76‑1 CACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCA < 2:5001271/76‑1 ACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAG < 2:3873711/76‑1 ACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAG > 2:2515234/1‑76 CCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGC < 2:1748493/76‑1 CCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGC < 2:2607904/76‑1 GAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCCGCGt > 2:308247/1‑75 GAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGt > 2:5343039/1‑75 AAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGAT < 2:553305/76‑1 AAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGAT < 2:2622375/76‑1 AGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGA > 2:5766703/1‑76 AGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGA > 2:4459861/1‑76 AGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGA > 2:2524506/1‑76 ATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACC < 1:2612530/76‑1 ATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACC < 2:2670766/76‑1 ATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGAC < 2:5188420/76‑1 ATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGAC < 2:5262064/76‑1 TTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCCTTTTTGATACCAGCGATTTGACCGACG > 2:2104687/1‑76 TGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGC > 2:4220317/1‑76 GAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGCCGCC > 2:5465927/1‑76 AGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTG < 1:4688348/76‑1 AGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTG < 2:4539678/76‑1 GGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTCACACAAGCGATTTGACAGACTCCCTGT > 2:378618/1‑76 GGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTT > 1:1022002/1‑76 gGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGA < 2:4800814/75‑1 TGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGA < 1:1331881/76‑1 TGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGA < 1:2405218/76‑1 TGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGA < 1:2057665/76‑1 GTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAA < 2:668328/76‑1 GTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAA < 1:5476246/76‑1 GTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAA < 2:5484851/76‑1 GTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAA > 1:843023/1‑76 TTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAG < 1:4512894/76‑1 TGCATTGACCGAGTGAATCTACAATGGAGATCTTCGTTTTGGATACGAGCGATTTGACCGACGCCCTGTTTGAAtc > 1:1168050/1‑74 TGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGC < 1:1437155/76‑1 GCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCTCGGTTTGAAGCG > 1:5699715/1‑76 GCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCG < 2:2133708/76‑1 GCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCG < 1:756009/76‑1 CATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGC > 2:1173430/1‑76 ATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCG < 1:2424816/76‑1 ATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCG > 1:1571216/1‑76 TTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGC > 2:3384214/1‑76 TGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGCCGCCCTGTTTGAAGCGCGCC > 2:4483233/1‑76 TGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCC > 1:4098229/1‑76 GACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCT > 2:4091656/1‑76 CAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGA < 1:36350/76‑1 CAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGA > 2:3295782/1‑76 GATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAAT < 2:2152632/76‑1 GATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAAT < 1:2058144/76‑1 TTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAA > 1:87663/1‑76 TTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAA > 1:216168/1‑76 TGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAAT > 1:2416288/1‑76 TGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAAT > 2:1663401/1‑76 GAATCTACATTGGCTATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGACTAATA < 2:4181586/76‑1 ATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATG < 1:172937/76‑1 TCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGC < 1:653011/76‑1 TCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGC < 1:5569992/76‑1 TCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGC < 1:4067721/76‑1 TCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGC < 1:594815/76‑1 CTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCT > 2:4783050/1‑76 CTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCT < 1:681328/76‑1 CTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCT < 1:3282251/76‑1 TACAATGGCTATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTG < 1:173684/76‑1 TACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTG < 1:2842794/76‑1 ACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGT > 2:1192202/1‑76 ACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGT < 2:3106610/76‑1 AATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCG > 1:1751550/1‑76 CGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/279261‑279335‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCG > NC_000913/370982‑371056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |