New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 731453	NA (NA)	7 (0.050)	7/142	12.9	NA	coding (2648/4194 nt)	rhsC	RhsC
	?	NC_000913	= 731461	NA (NA)					coding (2656/4194 nt)	rhsC	RhsC
Rejected: Coverage evenness skew score above cutoff.

TACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCGGCAGGTAA  >  NC_000913/731434‑731528                    |                                                                            gccagctccagcACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGtata                     <  2:2923555/74‑1 (MQ=9)   cagctacagcACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGCATAcc                   >  2:4645452/1‑76 (MQ=21)   cagcgacagcACCCCCGGCTGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAcc                   <  1:964682/76‑1 (MQ=11)    agctacagcACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGCATCCGGATATCCGCATCCCGcataacc                  >  1:1641732/1‑73 (MQ=11)     gctacagcACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACcac                 >  1:3039070/1‑76 (MQ=34)      ctacagcACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACcaca                >  2:2873903/1‑76 (MQ=34)      ctacagcACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACcaca                <  1:5603222/76‑1 (MQ=35)      cgacagcACCCCCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACcaca                <  2:3764317/74‑1 (MQ=255)        acagcACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGa              >  2:1856429/1‑76 (MQ=34)         cagcACCCCCGGCGGGCGGACCGGCGTTCACACCCCCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGAc             <  2:5602381/76‑1 (MQ=11)         cagcACCACCGGCAGGCTGACCGGCGTTCACCCCACCGCAGCGAATCTGGATATCCGCATCCCGCATACCACAGAc             >  1:1539694/1‑76 (MQ=255)          cgcACCACCTGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATAACACAGAcc            <  1:717780/75‑1 (MQ=11)          agcCCCCCCGGCGGGCTGACCGGCGTTCACACCCCCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGAcc            <  2:3506992/76‑1 (MQ=11)          agcACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGAcc            >  1:4955542/1‑76 (MQ=35)          agcACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGAcc            <  1:3779856/76‑1 (MQ=35)          agcACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGAcc            <  1:920757/76‑1 (MQ=35)           gcACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGAccc           <  2:3466713/76‑1 (MQ=35)            ccccaccGGCGGGCGGCCCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCg          <  2:5119990/74‑1 (MQ=11)            caccgcCGGCAGGCTGAGCGGCGTGCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCg          <  2:876768/76‑1 (MQ=11)            caccacCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCg          >  2:2531236/1‑76 (MQ=34)            caccacCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCg          <  1:995995/76‑1 (MQ=35)             cccaccGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCgg         <  1:2242605/75‑1 (MQ=25)             accaccGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCGGGATATCCGCATCCCGTATACCACAGACCCgg         >  2:1261806/1‑76 (MQ=21)              ccaccGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCGGc        >  2:3209010/1‑76 (MQ=35)              ccaccGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCGGc        >  2:4352600/1‑76 (MQ=34)               caccGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCGGCa       <  1:5594755/76‑1 (MQ=35)                cccGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCGGCAg      <  1:5728742/75‑1 (MQ=25)                accGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCGGCAg      >  1:1324209/1‑76 (MQ=34)                 ccGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCGGCAgg     >  1:5620905/1‑76 (MQ=35)                   ggCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCGGCAGGTa   >  2:2154791/1‑76 (MQ=34)                   ggCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCGGCAGGTa   >  1:2503616/1‑76 (MQ=34)                   ggCAGGCGGCCCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCGGCAGGTa   <  2:2665586/76‑1 (MQ=255)                    gCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCGGCAGGTaa  >  2:121437/1‑76 (MQ=34)                    |                                                                            TACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCGGCAGGTAA  >  NC_000913/731434‑731528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.