Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_000913 | 4,474,849 | 20 bp→GTATTTCCCGGCATCTTTATAGCGATAGCA | intergenic (+24/+2) | yjgL → / ← argI | hypothetical protein/ornithine carbamoyltransferase 1 |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 4474849 | 4474868 | 20 | 99 [0] | [0] 100 | yjgL/argI | hypothetical protein/ornithine carbamoyltransferase 1 |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4474848 | 0 (0.000) | 60 (0.630) +GTATTTCCCGGCATCTTTATAGCGATAGCA |
41/90 | 1.0 | 100% | intergenic (+23/+22) | yjgL/argI | hypothetical protein/ornithine carbamoyltransferase 1 |
? | NC_000913 | 4474869 = | 0 (0.000) | intergenic (+44/+1) | yjgL/argI | hypothetical protein/ornithine carbamoyltransferase 1 |
ACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AAA‑TAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTC > NC_000913/4474774‑4474923 | aCGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGttt < 2:5074466/76‑1 (MQ=255) cGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTg < 2:2037453‑M1/76‑2 (MQ=255) gTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgt > 1:2500866‑M1/1‑74 (MQ=255) gTATAGCAATAGAACACTTTGGGCGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgt > 2:1999166‑M1/1‑74 (MQ=255) tataGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgta < 1:2697826‑M1/76‑4 (MQ=255) ataGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtat < 2:3449116‑M1/76‑5 (MQ=255) ataGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtat > 1:5286088‑M1/1‑72 (MQ=255) taGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatt < 1:1685334‑M1/76‑6 (MQ=255) gCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttc < 1:5047611‑M1/76‑8 (MQ=255) gCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttc < 2:5286087‑M1/76‑8 (MQ=255) cAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcc > 2:5170908‑M1/1‑68 (MQ=255) cAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcc > 2:1065605‑M1/1‑68 (MQ=255) aaTAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttccc < 2:716706‑M1/76‑10 (MQ=255) aaTAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttccc < 1:482835‑M1/76‑10 (MQ=255) aaTAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttccc > 1:4083442‑M1/1‑67 (MQ=255) aTAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccg > 1:1273664‑M1/1‑66 (MQ=255) aTAGAACACTTTGGGCGGAACAATAGAACTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccg > 2:4153916‑M1/1‑66 (MQ=255) tAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccgg > 1:2825938‑M1/1‑65 (MQ=255) tAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccgg < 1:290063‑M1/76‑12 (MQ=255) aGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggc < 2:2197713‑M1/76‑13 (MQ=255) aGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggc < 1:4083800‑M1/76‑13 (MQ=255) aGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggc > 2:5688683‑M1/1‑64 (MQ=255) gAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggca > 2:4142820‑M1/1‑63 (MQ=255) aaCACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcat < 2:520571‑M1/76‑15 (MQ=255) acTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctt > 1:5471607‑M1/1‑59 (MQ=255) tttGTGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatcttta < 2:2236662‑M1/76‑20 (MQ=255) ggTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagc > 1:415387‑M1/1‑53 (MQ=255) ggTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagc < 1:1307822‑M1/76‑24 (MQ=255) ggTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagc < 1:4543673‑M1/76‑24 (MQ=255) tGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcga > 1:1696397‑M1/1‑51 (MQ=255) gtaagaataGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgat < 1:2861330‑M1/74‑27 (MQ=255) gaagaaTAGACCTATCGCTGCAT‑AAAGTAATGTGATGCCGGGATGGTTTgtatttcccgtcatctttatagcgata < 2:1296643‑M1/76‑28 (MQ=255) gaagaaTAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata < 1:3289137‑M1/76‑28 (MQ=255) gaagaaTAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata < 1:510791‑M1/76‑28 (MQ=255) agaaTAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagc > 2:3669994‑M1/1‑47 (MQ=255) gaaTAGACCTATCACTGCATAAAA‑TAATGTGGTGAAGGGGTGGTTTgtatttcacggcatctttatagcgatagca > 2:3446866‑M1/1‑46 (MQ=255) gaaTAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagca < 1:2055278‑M1/76‑31 (MQ=255) aaTAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatccttataccgacagcaa > 2:738863‑M1/1‑45 (MQ=255) aTAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaat > 1:1685020‑M1/1‑44 (MQ=255) aTAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaat > 1:1722902‑M1/1‑44 (MQ=255) aGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatta > 2:2719944‑M1/1‑42 (MQ=255) aCCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatt > 1:1971189‑M1/1‑40 (MQ=255) ccTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattattt > 2:2879384‑M1/1‑39 (MQ=255) cTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattattta > 2:417158‑M1/1‑38 (MQ=255) tATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttac > 1:5258114‑M1/1‑37 (MQ=255) tATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttac > 2:5667976‑M1/1‑37 (MQ=255) aTCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttact < 1:2693641‑M1/76‑41 (MQ=255) aTCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatt < 2:663716‑M1/41‑6 (MQ=255) aTCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatt > 1:663716‑M1/1‑36 (MQ=255) tCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactg > 2:3497901‑M1/1‑35 (MQ=255) tCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagagatagcaattctttactg > 2:3540028‑M1/1‑35 (MQ=255) cACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga < 1:382259‑M1/76‑43 (MQ=255) cACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga > 1:1116388‑M1/1‑34 (MQ=255) cACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga > 1:4512257‑M1/1‑34 (MQ=255) cACTGCATAAAA‑TAATGGGATGCCGGGAGGGTTTgtattgcccggcatctttatagcgatagcaattatttactga < 2:200589‑M1/76‑43 (MQ=255) aCTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag < 1:4279716‑M1/76‑44 (MQ=255) aCTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag < 2:415387‑M1/76‑44 (MQ=255) aCTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag > 2:4259931‑M1/1‑33 (MQ=255) tGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcg < 2:3442830‑M1/76‑46 (MQ=255) tGCATAAAA‑TAATGGGATGCCGGGATGGTTTgtattgcccggcatctttatagcgatagcaattatttactgagcg < 2:3483138‑M1/76‑46 (MQ=255) ataaaa‑taatgtGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcg < 2:4091036‑M1/73‑49 (MQ=255) aaa‑taaTGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcga < 1:1221429‑M1/76‑52 (MQ=255) aa‑taatGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgac > 2:3399221‑M1/1‑24 (MQ=255) aa‑taatGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgac < 2:1696397‑M1/76‑53 (MQ=255) aa‑taatGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgac > 1:4610873‑M1/1‑24 (MQ=255) a‑taatGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgccc > 2:3535407‑M1/1‑23 (MQ=255) a‑taatGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgacc < 1:1610003‑M1/76‑54 (MQ=255) a‑taatGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgacc < 1:1147795‑M1/76‑54 (MQ=255) taatGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgacca < 2:1637451‑M1/76‑55 (MQ=255) aatGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccat > 2:4703498‑M1/1‑21 (MQ=255) atGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatc > 2:5111339‑M1/1‑20 (MQ=255) atGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatc < 1:1065605‑M1/76‑57 (MQ=255) tgtgATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatca > 1:1038060‑M1/1‑19 (MQ=255) tgtgATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatca > 2:5157277‑M1/1‑19 (MQ=255) tGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgct > 2:1472948‑M1/1‑14 (MQ=255) gCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctt > 1:1428479‑M1/1‑13 (MQ=255) gCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctt > 2:4842800‑M1/1‑13 (MQ=255) gcgGGCTGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgcttt < 2:422613‑M1/75‑65 (MQ=255) ctgggatGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgccgcgaccatcaccgcttt > 2:4090858‑M1/3‑12 (MQ=255) ccGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgcttt > 2:4437179‑M1/1‑12 (MQ=255) cGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttg > 1:5265414‑M1/1‑11 (MQ=255) gggATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttga > 2:3081542‑M1/1‑10 (MQ=255) ggATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgat > 1:5685210‑M1/1‑9 (MQ=255) ggATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgat > 1:5052207‑M1/1‑9 (MQ=255) ggATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgat > 2:2335693‑M1/1‑9 (MQ=255) gATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgata < 1:2879384‑M1/76‑69 (MQ=255) tGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgatagt > 1:3919096‑M1/1‑6 (MQ=255) tGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgatagt < 1:4375655‑M1/76‑71 (MQ=255) ggTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgatagta < 1:2057952‑M1/76‑72 (MQ=255) tttgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgatagtatg < 1:4175126‑M1/76‑74 (MQ=255) tttgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgatagtatg > 1:5528138‑M1/1‑3 (MQ=255) ttgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgatagtatgc < 2:3620183‑M1/76‑75 (MQ=255) ttgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgatagtatgc > 2:4584506‑M1/1‑2 (MQ=255) ttgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgatagtatgc < 1:3195946‑M1/76‑75 (MQ=255) tgtatttcccggcctctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgatagtatgca < 2:4436288‑M1/76‑76 (MQ=255) tgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgatagtatgca > 2:5613446‑M1/1‑1 (MQ=255) tgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgatagtatgca > 2:3148957‑M1/1‑1 (MQ=255) tgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgctttgatagtatgca < 2:3919095‑M1/76‑76 (MQ=255) tgtatttcccggcatctttatagcgatagcaattatttactgagcgacgcgaccataaccgctttgatagtatgca > 2:2352945‑M1/1‑1 (MQ=255) | ACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AAA‑TAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTC > NC_000913/4474774‑4474923 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |