| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,474,849 | 20 bp→GTATTTCCCGGCATCTTTATAGCGATAGCA | intergenic (+24/+2) | yjgL → / ← argI | hypothetical protein/ornithine carbamoyltransferase 1 |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4474849 | 4474868 | 20 | 99 [0] | [0] 100 | yjgL/argI | hypothetical protein/ornithine carbamoyltransferase 1 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4474848 | 0 (0.000) | 60 (0.630) +GTATTTCCCGGCATCTTTATAGCGATAGCA |
41/90 | 1.0 | 100% | intergenic (+23/+22) | yjgL/argI | hypothetical protein/ornithine carbamoyltransferase 1 |
| ? | NC_000913 | 4474869 = | 0 (0.000) | intergenic (+44/+1) | yjgL/argI | hypothetical protein/ornithine carbamoyltransferase 1 | |||||
TTGGGTGGAAGAATAGACCTATCACTGCATAAATAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT > NC_000913/4474794‑4474944 | aatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatccttataccgacagcaa > 2:738863‑M2/76‑76 (MQ=255) atagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaat > 1:1722902‑M2/75‑76 (MQ=255) atagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaat > 1:1685020‑M2/75‑76 (MQ=255) agacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaatta > 2:2719944‑M2/73‑76 (MQ=255) acctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaattatt > 1:1971189‑M2/71‑76 (MQ=255) cctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTAttt > 2:2879384‑M2/70‑76 (MQ=255) ctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTa > 2:417158‑M2/69‑76 (MQ=255) tatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTAc > 2:5667976‑M2/68‑76 (MQ=255) tatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTAc > 1:5258114‑M2/68‑76 (MQ=255) atcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACt < 1:2693641‑M2/10‑1 (MQ=255) tcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTg > 2:3497901‑M2/66‑76 (MQ=255) tcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagagatagcaATTCTTTACTg > 2:3540028‑M2/66‑76 (MQ=255) cactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGa > 1:4512257‑M2/65‑76 (MQ=255) cactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGa < 1:382259‑M2/12‑1 (MQ=255) cactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGa > 1:1116388‑M2/65‑76 (MQ=255) cactgcataaaataatgggatgccgggagggtttgtattgcccggcatctttatagcgatagcaATTATTTACTGa < 2:200589‑M2/12‑1 (MQ=255) actgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAg > 2:4259931‑M2/64‑76 (MQ=255) actgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAg < 2:415387‑M2/13‑1 (MQ=255) actgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAg < 1:4279716‑M2/13‑1 (MQ=255) tgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCg < 2:3442830‑M2/15‑1 (MQ=255) tgcataaaataatgggatgccgggatggtttgtattgcccggcatctttatagcgatagcaATTATTTACTGAGCg < 2:3483138‑M2/15‑1 (MQ=255) ataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTcg < 2:4091036‑M2/18‑1 (MQ=255) aaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGa < 1:1221429‑M2/21‑1 (MQ=255) aataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGAc > 2:3399221‑M2/55‑76 (MQ=255) aataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGAc > 1:4610873‑M2/55‑76 (MQ=255) aataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGAc < 2:1696397‑M2/22‑1 (MQ=255) ataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGccc > 2:3535407‑M2/54‑76 (MQ=255) ataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGAcc < 1:1147795‑M2/23‑1 (MQ=255) ataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGAcc < 1:1610003‑M2/23‑1 (MQ=255) taatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCa < 2:1637451‑M2/24‑1 (MQ=255) aatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCAt > 2:4703498‑M2/52‑76 (MQ=255) atgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATc > 2:5111339‑M2/51‑76 (MQ=255) atgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATc < 1:1065605‑M2/26‑1 (MQ=255) tgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCa > 2:5157277‑M2/50‑76 (MQ=255) tgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCa > 1:1038060‑M2/50‑76 (MQ=255) tgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCt > 2:1472948‑M2/45‑76 (MQ=255) gccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCtt > 2:4842800‑M2/44‑76 (MQ=255) gccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCtt > 1:1428479‑M2/44‑76 (MQ=255) gcgggctggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCttt < 2:422613‑M2/34‑1 (MQ=255) ctgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGCCGCGACCATCACCGCttt > 2:4090858‑M2/43‑76 (MQ=255) ccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCttt > 2:4437179‑M2/43‑76 (MQ=255) cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTg > 1:5265414‑M2/42‑76 (MQ=255) gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGa > 2:3081542‑M2/41‑76 (MQ=255) ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGAt > 2:2335693‑M2/40‑76 (MQ=255) ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGAt > 1:5052207‑M2/40‑76 (MQ=255) ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGAt > 1:5685210‑M2/40‑76 (MQ=255) gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATa < 1:2879384‑M2/38‑1 (MQ=255) tggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGt < 1:4375655‑M2/40‑1 (MQ=255) tggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGt > 1:3919096‑M2/37‑76 (MQ=255) ggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTa < 1:2057952‑M2/41‑1 (MQ=255) tttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATg > 1:5528138‑M2/34‑76 (MQ=255) tttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATg < 1:4175126‑M2/43‑1 (MQ=255) ttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGc < 2:3620183‑M2/44‑1 (MQ=255) ttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGc > 2:4584506‑M2/33‑76 (MQ=255) ttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGc < 1:3195946‑M2/44‑1 (MQ=255) tgtatttcccggcctctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCa < 2:4436288‑M2/45‑1 (MQ=255) tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCa < 2:3919095‑M2/45‑1 (MQ=255) tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCa > 2:5613446‑M2/32‑76 (MQ=255) tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCa > 2:3148957‑M2/32‑76 (MQ=255) tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGACGCGACCATAACCGCTTTGATAGTATGCa > 2:2352945‑M2/32‑76 (MQ=255) tgcatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCa > 2:2687566‑M2/32‑76 (MQ=255) gtatttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCAt > 2:336799‑M2/31‑76 (MQ=255) atttcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATAc > 2:500974‑M2/29‑76 (MQ=255) tcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGt < 1:4661748‑M2/51‑1 (MQ=255) tcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGt > 2:2213062‑M2/26‑76 (MQ=255) tcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGt < 1:2806121‑M2/51‑1 (MQ=255) tcccggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGt > 1:4504770‑M2/26‑76 (MQ=255) cggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtttt < 2:3562599‑M2/54‑1 (MQ=255) cgccatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtttt > 2:5803994‑M2/23‑76 (MQ=255) ggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTc > 1:5236608‑M2/22‑76 (MQ=255) ggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTc > 2:731265‑M2/22‑76 (MQ=255) ggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTc < 1:3669021‑M2/55‑1 (MQ=255) ggcatctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTc > 1:2000237‑M2/22‑76 (MQ=255) atctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGc > 1:1034244‑M2/19‑76 (MQ=255) tctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGcc < 1:3948652‑M2/59‑1 (MQ=255) tctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGcc < 1:5336271‑M2/59‑1 (MQ=255) ctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCgcca > 2:2097206‑M2/17‑75 (MQ=255) ctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCt > 2:3626881‑M2/17‑76 (MQ=255) ctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCt > 2:1065586‑M2/17‑76 (MQ=255) ctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGCTTTCCGCCt > 1:2308479‑M2/17‑76 (MQ=255) tttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTg > 1:1464452‑M2/16‑76 (MQ=255) ttatagcgatagcaATTATTTACTGAGCGTCGCGCCCATCACCGCTTTGATAGTATGCATACGGCTTTCCCCCCGa > 2:52994‑M2/15‑76 (MQ=255) ttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGa > 2:5578193‑M2/15‑76 (MQ=255) atagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATc < 1:1065586‑M2/64‑1 (MQ=255) tagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCa > 1:4738298‑M2/12‑76 (MQ=255) agcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCaa > 1:5246861‑M2/11‑76 (MQ=255) gcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCaaa < 1:1522685‑M2/67‑1 (MQ=255) cgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCaaaa < 1:3399221‑M2/68‑1 (MQ=255) gatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATaaaaaa < 2:5685208‑M2/69‑1 (MQ=255) gatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCaaaaa < 2:4083441‑M2/69‑1 (MQ=255) tagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACa > 1:1277803‑M2/6‑76 (MQ=255) tagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACa < 1:1218745‑M2/71‑1 (MQ=255) agcaATTATTTACTGAGCGTCGCGACCATCACCGCttt > 2:3797632‑M2/5‑38 (MQ=255) agcaATTATTTACTGAGCGTCGCGACCATCACCGCttt < 1:3797632‑M2/34‑1 (MQ=255) agcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACaa < 1:3980120‑M2/72‑1 (MQ=255) caATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCaaaa < 1:2295711‑M2/68‑1 (MQ=255) caATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCaaaa > 2:2295711‑M2/3‑70 (MQ=255) attattTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt > 1:5814828/1‑76 (MQ=255) attattTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt > 2:1417472/1‑76 (MQ=255) attattTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt < 2:2857855/76‑1 (MQ=255) | TTGGGTGGAAGAATAGACCTATCACTGCATAAATAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT > NC_000913/4474794‑4474944 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |