| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 66,533 | 3540 bp→CCCGAGACCCGCACGCGTCGACCTGCA | [araD]–araB | [araD], araA, araB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 66533 | 70072 | 3540 | 130 [0] | [0] 157 | [araD]–araB | [araD],araA,araB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 66532 | 0 (0.000) | 83 (0.820) +CCCGAGACCCGCACGCGTCGACCTGCA |
49/96 | 0.6 | 100% | coding (19/696 nt) | araD | L‑ribulose‑5‑phosphate 4‑epimerase |
| ? | NC_000913 | 70073 = | 0 (0.000) | intergenic (‑25/‑314) | araB/araC | L‑ribulokinase/transcriptional regulator for ara operon | |||||
Only 100 of 130 total aligned reads displayed.
CGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTG > NC_000913/66457‑66607 | cGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCg < 1:3014204/76‑1 (MQ=255)cGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCg < 1:2485334/76‑1 (MQ=255) ggCGCTGACGTTGCTCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATCCCCGGCGc < 2:3028798‑M1/76‑2 (MQ=255) ggCGCTGACGTTGCCCCATGTGAGCGTGACCAGGCTGCGTTTTGGCAGCGCCAGGCTTGCTTCTAATACCCGGCGc > 1:2208164‑M1/1‑75 (MQ=255) gcTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATCCCCGGCGcccg > 1:5638240‑M1/1‑72 (MQ=255) gcTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccg > 2:4959116‑M1/1‑72 (MQ=255) gcTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccg > 1:3892417‑M1/1‑72 (MQ=255) tggcgtgGCCCCAGGTGGGGGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgag < 2:437733‑M1/73‑7 (MQ=255) tGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgag > 1:1165233‑M1/1‑70 (MQ=255) tGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgag < 1:5094729‑M1/76‑7 (MQ=255) tGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgag < 1:2483906‑M1/76‑7 (MQ=255) gACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagc > 2:646425‑M1/1‑69 (MQ=255) gACGGTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgaga < 2:481402‑M1/76‑8 (MQ=255) tGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgggacccgc > 1:2425997‑M1/1‑64 (MQ=255) gCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgca < 2:5302002‑M1/76‑14 (MQ=255) ccccATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcac > 1:816979‑M1/1‑62 (MQ=255) cccATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacg < 1:1178227‑M1/76‑16 (MQ=255) cATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcg > 1:5668712‑M1/1‑59 (MQ=255) cATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcg > 1:3763153‑M1/1‑59 (MQ=255) aTGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgt < 1:2928034‑M1/76‑19 (MQ=255) tgtgAGCGTGCCCAGGTTGTGTTTTGGCAGCTCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtc < 2:1277461‑M1/76‑20 (MQ=255) tgtgAGCGTGCCCAGGTTGTGTTGTGGCAGCGCCAGGTTTGCTTCTAATACCCGGCGcccgagacccgcacgcgtc < 2:1380357‑M1/76‑20 (MQ=255) tgtgAGCGTGACCAGTTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtc < 1:4837659‑M1/76‑20 (MQ=255) tgtgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtc < 1:3562364‑M1/76‑20 (MQ=255) tgtgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtc < 1:4310820‑M1/76‑20 (MQ=255) tgtgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtc < 2:5059607‑M1/76‑20 (MQ=255) gttgagCGTGGCAAGGTTGTGTTTGGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtc < 2:5257039‑M1/74‑20 (MQ=255) tgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcctcgc > 2:3688109‑M1/1‑55 (MQ=255) gAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgac > 1:4774055‑M1/1‑54 (MQ=255) gAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgac > 1:5364256‑M1/1‑54 (MQ=255) aGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacc < 2:2371541‑M1/76‑24 (MQ=255) aGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacc > 1:433543‑M1/1‑53 (MQ=255) aGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacc > 2:4901233‑M1/1‑53 (MQ=255) aGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacc > 1:2875688‑M1/1‑53 (MQ=255) tGACCAGGTTGTGTTTTGTCAGCGCCAGGTTGGCTTCTAATACCCGTCGcccgagacccgcactcgtcgacctgca < 1:4217316‑M1/76‑28 (MQ=255) gACGAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcag < 2:640387‑M1/76‑29 (MQ=255) gACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATGCCCGGCGcccgagacccgcacgcgtcgacctgcag < 2:3618932‑M1/76‑29 (MQ=255) gACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgcgacccgcacgcgtccacccgcag > 1:3446038‑M1/1‑48 (MQ=255) gACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgccctgcag > 2:4480716‑M1/1‑48 (MQ=255) aCCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcagg > 1:3563660‑M1/1‑47 (MQ=255) cAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggta < 1:2355202‑M1/76‑32 (MQ=255) aGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtat < 1:1868725‑M1/76‑33 (MQ=255) aGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcagggat > 1:4852282‑M1/1‑44 (MQ=255) gtttgtGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatg < 1:463770‑M1/74‑34 (MQ=255) ttGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatgga > 2:2545220‑M1/1‑41 (MQ=255) ttGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatgga > 2:3606068‑M1/1‑41 (MQ=255) ttGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatgga < 2:3035032‑M1/76‑36 (MQ=255) ttGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatgga < 1:3062186‑M1/76‑36 (MQ=255) tgtttggCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaa < 2:1637994‑M1/74‑40 (MQ=255) tggggcggcgccAGGTTGGGTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaaca < 2:1600504‑M1/73‑42 (MQ=255) ttGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgccggtatggagaaacag > 2:2432892‑M1/1‑34 (MQ=255) ttGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacag < 2:1442865‑M1/76‑43 (MQ=255) ttGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacccgccggtatcgagaaacag > 2:2411157‑M1/1‑34 (MQ=255) tGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagt > 1:4158083‑M1/1‑33 (MQ=255) tGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagt > 1:4794360‑M1/1‑33 (MQ=255) ggCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagta < 1:3581665‑M1/76‑45 (MQ=255) gCAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtag > 2:5690137‑M1/1‑31 (MQ=255) cAGCGCGAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgccctgcaggtatggagaaacagtaga < 1:926805‑M1/76‑47 (MQ=255) cAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtaga > 1:2954501‑M1/1‑30 (MQ=255) cAGCGCCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtaga < 2:2273699‑M1/76‑47 (MQ=255) gcgcCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagaga > 2:3278442‑M1/1‑28 (MQ=255) gcCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagt > 2:2805343‑M1/1‑26 (MQ=255) gcCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagt > 1:1967413‑M1/1‑26 (MQ=255) gcCAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagt > 1:5060271‑M1/1‑26 (MQ=255) ccgggttgGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagtt < 2:3854488‑M1/73‑52 (MQ=255) ccgggttgGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagtt < 2:1226786‑M1/73‑52 (MQ=255) ccAGGTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagtt < 2:2980371‑M1/76‑52 (MQ=255) ccAGGTTGGCTTCGAATGCGCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagtt < 1:5707236‑M1/76‑52 (MQ=255) cAGGTGGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttg < 2:1165233‑M1/76‑53 (MQ=255) ggTTGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcg > 1:1666712‑M1/1‑22 (MQ=255) ggTTGGCGTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcg < 2:4739714‑M1/76‑55 (MQ=255) tGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgccctgcaggtatggagaaacagtagagagttgcgata > 2:2119226‑M1/1‑19 (MQ=255) tGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgata < 1:2477603‑M1/76‑58 (MQ=255) tGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgata > 2:549879‑M1/1‑19 (MQ=255) tGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgata > 2:5205471‑M1/1‑19 (MQ=255) tGGCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgata < 1:5196476‑M1/76‑58 (MQ=255) ggCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataa < 2:2954501‑M1/76‑59 (MQ=255) ggCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataa < 2:2425997‑M1/76‑59 (MQ=255) gCTTCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaa > 1:2854890‑M1/1‑17 (MQ=255) cTTCTAATACCCGGCGcccgagacccgcacgcgtcgccctgcaggtatggagaaacagtagagagttgcgataaaa > 2:605976‑M1/1‑16 (MQ=255) ttCTAATACCCGGCGcccgaggcccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaa < 1:3796220‑M1/76‑62 (MQ=255) ttCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagacacagcagagagtggctataaaaa > 2:5736461‑M1/1‑15 (MQ=255) ttCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaa > 1:3170211‑M1/1‑15 (MQ=255) ttCTAATACCAGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaa > 1:5483693‑M1/1‑15 (MQ=255) tCTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaag < 1:348320‑M1/76‑63 (MQ=255) cgaataCCCGGCGcgcgagacccgctcgcgtcgccctgcaggtatggagaaacggtagagagttgcgataaaaagc < 2:3568088‑M1/74‑64 (MQ=255) cTAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgttaaaaagc < 1:250066‑M1/76‑64 (MQ=255) cTAATACCCGGCGcccgagacccgcacgcgtcgaccggcaggtatggagaaacagtagagagttgcgataaaaagc < 2:4448511‑M1/76‑64 (MQ=255) tAATACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcg > 1:2646939‑M1/1‑12 (MQ=255) aaTACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgt < 1:5007246‑M1/76‑66 (MQ=255) aTACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtc > 1:5459011‑M1/1‑10 (MQ=255) aTACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtc > 1:1091800‑M1/1‑10 (MQ=255) tACCCGGCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtca > 1:4730093‑M1/1‑9 (MQ=255) ccggcgcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggt < 2:4446069‑M1/74‑71 (MQ=255) ccggcgcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggt < 2:2332855‑M1/74‑71 (MQ=255) ccggcgcccgagacccgcacgcgtcgacctgcaggcatggagaaacagtagagagttgcgataaaaagcgtcaggg > 2:4729717‑M1/3‑6 (MQ=255) ggCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagggagttgcgataaaaagcgtcaggtag < 2:4666018‑M1/76‑73 (MQ=255) ggCGcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtag < 2:5071623‑M1/76‑73 (MQ=255) cgcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcagggagga > 1:1954459‑M1/1‑2 (MQ=255) gcccgagacccgcacgcgtcgacctgcaggtatggagaaacagtagagagttgcgataaaaagcgtcaggtaggat < 1:858811‑M1/76‑76 (MQ=255) | CGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTG > NC_000913/66457‑66607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |