New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4169328 =	80 (0.500)	111 (0.810) +GGAATTAATT	75/130	0.3	61.6%	noncoding (113/120 nt)	rrfB	5S ribosomal RNA
	?	NC_000913	= 4169500	NA (NA)					intergenic (+165/‑136)	rrfB/murB	5S ribosomal RNA/UDP‑N‑acetylenolpyruvoylglucosamine reductase

GCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCT  >  NC_000913/4169470‑4169575                               |                                                                            gggggcgggcCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg                                <  2:2806885/74‑1 (MQ=11)  cGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCATTTTTGCGt                               >  2:1699293/1‑76 (MQ=17)  cGGGCAGGACGCACGCCATAAACTGCCAGGCAGCAAATTAAGCAGAAGGCCATCCTGACGGATGACCGTTTTGCGt                               >  1:2360609/1‑76 (MQ=11)   gggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt                              >  1:483888/1‑76 (MQ=34)   gggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTCACGGATGGCCTGTTTGCgct                              >  2:4703211/1‑74 (MQ=11)    ggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGCCCATCCTCACGGATGCCCTTTTCGCGtct                             >  2:5633518/1‑74 (MQ=11)    ggCAGGACCCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGttt                             <  1:5233741/76‑1 (MQ=25)     gCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTc                            >  1:1635648/1‑76 (MQ=38)         gACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACa                        >  1:2985664/1‑76 (MQ=255)          ccgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACaa                       <  1:4860437/75‑1 (MQ=255)          aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACaa                       >  1:3733581/1‑76 (MQ=255)            gcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAAc                     >  1:1615316/1‑76 (MQ=255)            gcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAAc                     >  1:5119454/1‑76 (MQ=255)            gcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAAc                     >  1:1309225/1‑76 (MQ=255)            gcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGACGGCCTTTTTGCGTTTCTACAAAc                     >  2:4520539/1‑76 (MQ=255)            ccccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAAc                     <  2:4823419/75‑1 (MQ=255)             cccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAAct                    <  2:5545250/76‑1 (MQ=255)              ccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGCTGGCATCACTGCGTTTCTACAAActc                   >  2:4603924/1‑76 (MQ=14)              ccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAActc                   >  1:3816723/1‑76 (MQ=255)              ccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAActc                   >  2:1746279/1‑76 (MQ=255)               cgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAActct                  >  1:1954388/1‑76 (MQ=255)               cgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAActct                  <  1:5518826/76‑1 (MQ=255)               cgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGAGGGCCTTTTTGCGTTGCTACAAActct                  >  1:2309944/1‑76 (MQ=255)                gccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCtt                 >  1:129987/1‑76 (MQ=255)                gccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCtt                 >  2:5660904/1‑76 (MQ=255)                gccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCtt                 >  1:302921/1‑76 (MQ=255)                gccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCtt                 <  1:2291453/76‑1 (MQ=255)                   aTAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAATCTCTTCCt              >  1:362681/1‑76 (MQ=255)                     aaaCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTgt            >  1:259824/1‑76 (MQ=255)                       aCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTgtcg          <  1:4220586/76‑1 (MQ=255)                        cTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTgtcgt         <  2:1218455/76‑1 (MQ=255)                        cTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTgtcgt         <  1:1145195/76‑1 (MQ=255)                         tGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTGCAAACTCTTCCTgtcgtc        <  2:483888/76‑1 (MQ=255)                          gCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCa       <  1:2239425/76‑1 (MQ=255)                           gcAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGCTGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCat      <  2:432988/75‑1 (MQ=255)                           ccAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCat      <  2:4109139/76‑1 (MQ=255)                           ccAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCat      <  1:2279787/76‑1 (MQ=255)                              ggCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATc   >  2:4242190/1‑76 (MQ=255)                               gCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGCCATATCt  >  2:5809732/1‑76 (MQ=255)                               gCATCAAATTAACCAGAAGCACATCATGACGGATGGCCTTTTTGCGTTCATAAAAACTCTTTCTGTCGTCATATCt  >  2:326986/1‑76 (MQ=18)                               |                                                                            GCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCT  >  NC_000913/4169470‑4169575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.