| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 279335 | NA (NA) | 108 (0.790) | 70/150 | 0.5 | 23.7% | coding (252/339 nt) | b4505 | hypothetical protein |
| ? | NC_000913 | 370982 = | 347 (2.540) | coding (535/882 nt) | mhpC | 2‑hydroxy‑6‑ketonona‑2,4‑dienedioic acid hydrolase | |||||
Only 100 of 108 total aligned reads displayed.
CGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/279261‑279335‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCG > NC_000913/370982‑371056 CGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAA < 2:786031/76‑1CGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAA > 1:581105/1‑76CGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAA < 2:2404474/76‑1CGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAA < 1:4504237/76‑1CGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAA < 1:3760782/76‑1CGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAA < 1:4116516/76‑1 GAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAAT > 1:3949440/1‑76 AAAGACACTGAAGTTCAAAACACAGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGA < 2:473856/76‑1 AAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGAT > 1:1466827/1‑76 GACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATAT < 1:1705998/76‑1 GACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATAT < 2:445937/76‑1 GACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATAT > 1:4786660/1‑76 ACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTT < 1:1383509/76‑1 CTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTC < 2:1195795/76‑1 TGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCG < 2:4325632/76‑1 GAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGT < 2:130115/76‑1 GAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGT > 1:2418447/1‑76 GAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGCGTTGCATTGACAGACTGAATCTACAATGGATATCTTAGT > 2:2184882/1‑76 AAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTT < 2:4464359/76‑1 GTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTT > 1:4139560/1‑76 TTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTT > 1:3371825/1‑76 CAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGA < 1:220049/76‑1 AAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGAT > 1:1249451/1‑76 AAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGAT < 1:3997552/76‑1 AAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATA > 2:299147/1‑76 AAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATA < 2:781833/76‑1 AACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATAC > 1:252371/1‑76 AACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATAC < 1:2416187/76‑1 AACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATAC < 1:2160844/76‑1 AACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATAC > 2:3831437/1‑76 AACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCGTCGTTGTTGATAC < 1:2462496/76‑1 acgCCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACC < 2:3400478/73‑1 ACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACC > 2:1414401/1‑76 ACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACC < 2:1442663/76‑1 ACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACC > 1:4244373/1‑76 ctgCGAACGAGATCATTGAAAGGTGTTTTGCATTGACGGATTGAATCTACAATGGATATCTTCGTTTTTGATACCA < 1:4610104/73‑1 ACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAG > 2:1255458/1‑76 ACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAG < 2:3094732/76‑1 ACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAG < 1:1351398/76‑1 CGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCG > 2:2099820/1‑76 GAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAGTCTACAATGGATATCTTCGTTTTTGATACCAGCGA > 1:3548391/1‑76 GAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGA < 1:2855625/76‑1 GAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGA < 1:2835920/76‑1 GAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGA > 1:243928/1‑76 AAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGAT > 2:1448804/1‑76 AAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATT > 2:3708371/1‑76 AGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTT < 2:191264/76‑1 ATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACC < 2:170416/76‑1 ATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACC < 1:1651180/76‑1 ATAATGGAAAGTGTGGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTGTTGATACCAGCGAGTTGACC < 1:1695952/76‑1 AATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGA > 1:4313221/1‑76 ATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGAC > 2:3992547/1‑76 TTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACG < 2:252371/76‑1 AGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTt > 2:3382966/1‑75 AGGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTG > 1:1284561/1‑76 GGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGT < 1:2146831/76‑1 GGGGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGT > 2:4276435/1‑76 GGTGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTT > 2:3829742/1‑76 TGTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGA > 1:1151892/1‑76 GTTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAA > 2:3784615/1‑76 TTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAG > 1:568788/1‑76 TTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAG > 1:2741850/1‑76 TTGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCCACGCCCTGTTTGCAG > 2:4695844/1‑76 TGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAcc > 2:3884810/1‑74 TGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGC > 1:176456/1‑76 TGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGC > 2:2239754/1‑76 TGCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGC > 1:2732622/1‑76 GCATTGACCGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCG > 2:2885373/1‑76 GCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCG < 2:1541784/76‑1 GCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCG > 1:1124986/1‑76 GCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCG < 1:4623113/76‑1 GCATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCG > 1:2760309/1‑76 ATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCG > 2:1525244/1‑76 ATTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCG > 1:2249850/1‑76 TTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGC > 2:4560644/1‑76 TTGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGC < 1:2616765/76‑1 TGACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCC > 2:3959377/1‑76 GACAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCT > 2:1003042/1‑76 CAGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGA > 2:1875587/1‑76 AGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAA < 1:3423842/76‑1 AGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAA < 1:858231/76‑1 AGATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAA > 2:377041/1‑76 GATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAAT > 2:2160475/1‑76 ATTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATA < 2:2978358/76‑1 TTGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAA > 1:1676712/1‑76 TGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAAT < 2:4673339/76‑1 TGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAAT < 2:3650296/76‑1 TGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAAT > 2:4021366/1‑76 TGAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAAT < 1:2483051/76‑1 GAATCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATA < 1:3865954/76‑1 TCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGC > 1:222044/1‑76 TCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGC > 2:3782834/1‑76 TCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGC < 1:4830933/76‑1 TCTACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGC > 1:1527309/1‑76 TACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGTATAATATGCTG > 2:2677401/1‑76 TACAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTG > 2:532449/1‑76 CAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTC < 2:4269011/76‑1 CAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTC < 2:2165489/76‑1 CAATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTC > 1:338901/1‑76 AATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCG > 1:4499879/1‑76 CGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/279261‑279335‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCG > NC_000913/370982‑371056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |