| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 924547 | 112 (1.380) | 10 (0.130) | 5/94 | NT | 8.3% | coding (862/2277 nt) | clpA | ATPase and specificity subunit of ClpA‑ClpP ATP‑dependent serine protease, chaperone activity |
| ? | W3110S.gb | = 924563 | 114 (1.460) | coding (878/2277 nt) | clpA | ATPase and specificity subunit of ClpA‑ClpP ATP‑dependent serine protease, chaperone activity | |||||
AAAAACGTTTTAAAGCGTTGCTCAAGCAGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/924476‑924547‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccGCACCGATAATGGTGTGGATCTCATCAATAAACAGGATGCTGTTAGTGTCCTGCTCCAGCTGCTTGAGCA < W3110S.gb/924563‑924494 AAAAACGTTTTAAAGCGTTGCTCAAGCAGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATC < 1:1689592/71‑1AAAAACGTTTTAAAGCGTTGCTCAAGCAGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATC < 1:5687867/71‑1AAAAACGTTTTAAAGCGTTGCTCAAGCAGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATC > 1:5435053/1‑71AAAAACGTTTTAAAGCGTTGCTCAAGCAGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATC > 1:451549/1‑71 gcAACGCTTTAAAACGTTTTTCAAGCAGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATC > 1:1818045/3‑70 GTTGCTCAAGCAGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATCCGCACCGATAATGGTG > 1:6523422/1‑71 CAAGCAGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATCCGCACCGATAATGGTGTGGATC > 1:1708400/1‑71 GCAGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATCCGCACCGATAATGGTGTGG < 1:5378250/65‑1 AGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATCCGCACCGATAATGGTGTGGAT > 1:858815/1‑65 AGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATCCGCACCGATAATGGTGTGGAT > 1:5822869/1‑65 AGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATCCGCACCGATAATGGTGTGGAT > 1:5267621/1‑65 GAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATCCGCACCGATAATGGTGTGG < 1:3461645/58‑1 CAGGACACTAACAGCATCCTGTTTATTGATGAGATCCGCACCGATAATGGTGTG < 1:5278106/54‑1 CAGGACACTAACAGCATCCTGTTTATTGATGAGATCCGCACCGATAATGGTGTG < 1:6305344/54‑1 CAGGACACTAACAGCATCCTGTTTATTGATGAGATCCGCACCGATAATGGTGTG < 1:2778869/54‑1 CCGCACCGATAATGGTGTGGATCTCATCAATAAACAGGATGCTGTTAGTGTCCTGCTCCAGCTGCTTGA > 1:3366990/1‑69 CCGCACCGATAATGGTGTGGATCTCATCAATAAACAGGATGCTGTT < 1:6498586/46‑1 CCGCACCGATAATGGTGTGGATCTCATCAATAAACAGGATGCTGTT < 1:2976427/46‑1 CCGCACCGATAATGGTGTGGATCTCATCAATAAACAGGATGCTGTT < 1:7185758/46‑1 CGCACCGATAATTGTGTGGATCTCATCAATAAACAGGATGCTGTT < 1:2989156/45‑1 CGCACCGATAATGGTGTGGATCTCATCAATAAACAGGATGCTGTTAGTGTCCTGCTCCAGCTGCTTGAGCA < 1:3489908/71‑1 CGCACCGATAATGGTGTGGATCTCATCAATAAACAGGATGCTGTTA > 1:1606935/1‑46 CGCACCGATAATGGTGTGGATCTCATCAATAAACAGGATGCTGTTA > 1:3068582/1‑46 CGCACCGATAATGGTGTGGATCTCATCAATAAACAGGATGCTGTT > 1:2162216/1‑45 AAAAACGTTTTAAAGCGTTGCTCAAGCAGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/924476‑924547‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccGCACCGATAATGGTGTGGATCTCATCAATAAACAGGATGCTGTTAGTGTCCTGCTCCAGCTGCTTGAGCA < W3110S.gb/924563‑924494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |