New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	= 1018919	67 (0.820)	4 (0.050)	4/90	NT	6.4%	coding (13/453 nt)	ycbG	conserved hypothetical protein
	?	W3110S.gb	= 1018940	55 (0.740)					coding (34/453 nt)	ycbG	conserved hypothetical protein

CTTCACTGGCCTAAAAAGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/1018847‑1018919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacCGCTTTCAAGATTTTCAAGTTGTTGATATTTCATAGCGATCTCAATGTTACCGTGTAACTCTTTACAG  <  W3110S.gb/1018940‑1018873                                                                                                                                               CTTCACTGGCCTAAAAAGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATC                                                                         >  1:7442931/1‑70   TCACTGGCCTAAAAAGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAA                                                                       >  1:238051/1‑70             AAAAAGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCA                                                                        >  1:3889096/1‑59                    TGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATC                                                                         >  1:4574798/1‑51                       TATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACCGCTTTCAAGATTTTCAAGT                                                  >  1:1899578/1‑71                                        CACGGTAACATTGAGATCGCTATGAAATATCAACCGCTTTCAAGATTTTCAAGTTGTTG                                             <  1:1358955/59‑1                                                 ATTGAGATCGCTATGAAATATCAACCGCTTTCAAGATTTTCAAGTTGTTGA                                            <  1:1660686/51‑1                                                   TGAGATCGCTATGAAATATCAACCGCTTTCAAGATTTTCAAGTTGTTGATA                                          >  1:4225627/1‑51                                                                      CAACCGCTTTCAAGATTTTCAAGTTGTTGATATTTCATAGCGATCTCAATGTTACCGTGTAACTCTTTACA   <  1:7032334/71‑1                                                                       AACCGCTTTCAAGATTTTCAAGTTGTTGATATTTCATAGCGATCTCAATGTTACCGT                <  1:6673063/57‑1                                                                        ACCGCTTTCAAGATTTTCAAGTTGTTGATATTTCATAGCGATCTCAATGTTACCGTGTAACTCTTTACAG  >  1:365322/1‑70                                                                                                                                               CTTCACTGGCCTAAAAAGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/1018847‑1018919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacCGCTTTCAAGATTTTCAAGTTGTTGATATTTCATAGCGATCTCAATGTTACCGTGTAACTCTTTACAG  <  W3110S.gb/1018940‑1018873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.