| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1018919 | 67 (0.820) | 4 (0.050) | 4/90 | NT | 6.4% | coding (13/453 nt) | ycbG | conserved hypothetical protein |
| ? | W3110S.gb | = 1018940 | 55 (0.740) | coding (34/453 nt) | ycbG | conserved hypothetical protein | |||||
TGGCCTAAAAAGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTA > W3110S.gb/1018853‑1018987 | tGGCCTAAAAAGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACt > 1:5104347/1‑71 (MQ=255) ggCCTAAAAAGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATcaacaa > 1:4324287/1‑68 (MQ=255) ggCCTAAAAAGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCaacaac > 1:92492/1‑69 (MQ=255) gCCTAAAAAGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACtt > 1:1766185/1‑70 (MQ=255) tAAAAAGCTGATATTCTGTAAAGAGTTACCCGGTAACATTGAGATCGCTATGAAATATcaaca < 1:1536420/63‑1 (MQ=255) tAAAAAGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGaa > 1:3006417/1‑70 (MQ=255) aaaaaGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGaaaa > 1:5173826/1‑71 (MQ=255) aaaaaGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGaaa > 1:4178241/1‑70 (MQ=255) aaaaGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGaaaa < 1:4646994/70‑1 (MQ=255) aaaaGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAAt < 1:3478440/71‑1 (MQ=255) aaaGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATc > 1:4444047/1‑71 (MQ=255) aaaGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATc > 1:4427932/1‑71 (MQ=255) aaaGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATc > 1:4596165/1‑71 (MQ=255) aaaGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATc > 1:6356343/1‑71 (MQ=255) aaGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCt < 1:1032446/71‑1 (MQ=255) gCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCtt > 1:3613029/1‑70 (MQ=255) gCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCtt > 1:3029135/1‑70 (MQ=255) cTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTg > 1:491575/1‑70 (MQ=255) tGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATc < 1:2200735/66‑1 (MQ=255) atatTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCt < 1:5261849/65‑1 (MQ=255) tatTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACcgctttcaagattttcaagt > 1:1899578‑M1/1‑51 (MQ=255) tatTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTg < 1:3828476/66‑1 (MQ=255) cTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGgt > 1:365322‑M2/1‑68 (MQ=255) tGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGaaa < 1:85375/55‑1 (MQ=255) tGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGaaa < 1:4876831/55‑1 (MQ=255) tGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGgttg < 1:7032334‑M2/71‑5 (MQ=255) gTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACt > 1:1226941/1‑49 (MQ=255) tAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTgg > 1:1419424/1‑70 (MQ=255) tAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGa < 1:6519008/71‑1 (MQ=255) tAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGa < 1:1538552/71‑1 (MQ=255) tAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGa < 1:4218019/71‑1 (MQ=255) tAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGCTTGGa < 1:2145227/71‑1 (MQ=255) aaGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGaa < 1:1799879/70‑1 (MQ=255) agagTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAAt > 1:1537625/1‑71 (MQ=255) agTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATgg < 1:3726405/71‑1 (MQ=255) agTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATgg < 1:2495460/71‑1 (MQ=255) gTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGa < 1:6542345/71‑1 (MQ=255) ttACACGGTAACATTGAGATCGCTATGAAATATCaacaac < 1:4700700/40‑1 (MQ=255) ttACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGaa < 1:5969396/45‑1 (MQ=255) ttACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATgg > 1:2137478/1‑69 (MQ=255) acacGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCtt > 1:135550/1‑49 (MQ=255) acacGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCtt > 1:7198015/1‑49 (MQ=255) acacGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAg > 1:5217453/1‑70 (MQ=255) acacGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAg > 1:5721621/1‑70 (MQ=255) cacGGTAACATTGAGATCGCTATGAAATATCAACcgctttcaagattttcaagttgttg < 1:1358955‑M1/59‑26 (MQ=255) cacGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTa < 1:2120400/71‑1 (MQ=255) acGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGgtt < 1:6673063‑M2/57‑4 (MQ=255) cGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGaa < 1:7035399/49‑1 (MQ=255) cGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATg < 1:5934177/63‑1 (MQ=255) cGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATc > 1:5655308/1‑71 (MQ=255) cGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATc > 1:381612/1‑71 (MQ=255) tAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAg < 1:1567271/48‑1 (MQ=255) tAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAg < 1:7154730/48‑1 (MQ=255) tAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGaa < 1:7272183/57‑1 (MQ=255) tAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTgg < 1:5259114/71‑1 (MQ=255) tAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTgg < 1:1698820/71‑1 (MQ=255) aCATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGt > 1:4476678/1‑70 (MQ=255) aCATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGt < 1:7122985/70‑1 (MQ=255) aTTGAGATCGCTATGAAATATCAACcgctttcaagattttcaagttgttga < 1:1660686‑M1/51‑27 (MQ=255) tGAGATCGCTATGAAATATCAACcgctttcaagattttcaagttgttgata > 1:4225627‑M1/1‑23 (MQ=255) tGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTaag < 1:1313225/70‑1 (MQ=255) tGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTaag > 1:2762280/1‑70 (MQ=255) gagaTCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTaa > 1:7544108/1‑68 (MQ=255) aTCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGaaa > 1:4252253/1‑48 (MQ=255) aTCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCa < 1:64740/71‑1 (MQ=255) tCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGaa > 1:1769326/1‑46 (MQ=255) tCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGaa > 1:1320170/1‑52 (MQ=255) tCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGaa > 1:5651051/1‑52 (MQ=255) tCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGaa > 1:6070334/1‑52 (MQ=255) tCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCa < 1:4453552/70‑1 (MQ=255) tCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCAt < 1:373207/71‑1 (MQ=255) tCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCAt < 1:4529946/71‑1 (MQ=255) tCGATATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCAt < 1:5550568/71‑1 (MQ=255) gCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGtt > 1:7539206/1‑60 (MQ=255) gCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATcg > 1:4934966/1‑71 (MQ=255) tGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATcgcg < 1:7232756/69‑1 (MQ=255) tGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATcgcg < 1:420465/69‑1 (MQ=255) tGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGaa < 1:1150665/71‑1 (MQ=255) gAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAg > 1:4617795/1‑71 (MQ=255) aaaTATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGc > 1:5983202/1‑61 (MQ=255) aaaTATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAg < 1:4588037/70‑1 (MQ=255) tatCAACAACTTGAAAATCTTGAAAGCGgttgatatttcatagcgatctca > 1:4225627‑M2/1‑28 (MQ=255) tCAACAACTTGAAAATCTTGAAAGCGgttgatatttcatagcgatctcaat < 1:1660686‑M2/51‑26 (MQ=255) tCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAg < 1:6867967/70‑1 (MQ=255) caacaaCTTGAAAATCTTGAAAGCGgttgatatttcatagcgatctcaatgttaccgtg < 1:1358955‑M2/59‑35 (MQ=255) caacaaCTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGt > 1:6824536/1‑70 (MQ=255) cAACcgctttcaagattttcaagttgttgatatttcatagcgatctcaatgttaccgtgtaactctttaca < 1:7032334‑M1/71‑68 (MQ=255) aacaacTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCa > 1:5825300/1‑55 (MQ=255) aaCcgctttcaagattttcaagttgttgatatttcatagcgatctcaatgttaccgt < 1:6673063‑M1/57‑55 (MQ=255) aCcgctttcaagattttcaagttgttgatatttcatagcgatctcaatgttaccgtgtaactctttacag > 1:365322‑M1/1‑2 (MQ=255) | TGGCCTAAAAAGCTGATATTCTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTA > W3110S.gb/1018853‑1018987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |