| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1018919 | 67 (0.820) | 4 (0.050) | 4/90 | NT | 6.4% | coding (13/453 nt) | ycbG | conserved hypothetical protein |
| ? | W3110S.gb | = 1018940 | 55 (0.740) | coding (34/453 nt) | ycbG | conserved hypothetical protein | |||||
CTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAATCACCCGTTACATAGAAGCC > W3110S.gb/1018873‑1019008 | cTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGgt > 1:365322‑M2/1‑68 (MQ=255) tGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGgttg < 1:7032334‑M2/71‑5 (MQ=255) tAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTgg > 1:1419424/1‑70 (MQ=255) tAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGa < 1:6519008/71‑1 (MQ=255) tAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGa < 1:4218019/71‑1 (MQ=255) tAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGa < 1:1538552/71‑1 (MQ=255) tAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGCTTGGa < 1:2145227/71‑1 (MQ=255) aaGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGaa < 1:1799879/70‑1 (MQ=255) agagTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAAt > 1:1537625/1‑71 (MQ=255) agTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATgg < 1:3726405/71‑1 (MQ=255) agTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATgg < 1:2495460/71‑1 (MQ=255) gTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGa < 1:6542345/71‑1 (MQ=255) ttACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATgg > 1:2137478/1‑69 (MQ=255) acacGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAg > 1:5721621/1‑70 (MQ=255) acacGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAg > 1:5217453/1‑70 (MQ=255) cacGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTa < 1:2120400/71‑1 (MQ=255) acGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGgtt < 1:6673063‑M2/57‑4 (MQ=255) cGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATg < 1:5934177/63‑1 (MQ=255) cGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATc > 1:5655308/1‑71 (MQ=255) cGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATc > 1:381612/1‑71 (MQ=255) tAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGaa < 1:7272183/57‑1 (MQ=255) tAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTgg < 1:1698820/71‑1 (MQ=255) tAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTgg < 1:5259114/71‑1 (MQ=255) aCATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGt > 1:4476678/1‑70 (MQ=255) aCATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGt < 1:7122985/70‑1 (MQ=255) tGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTaag > 1:2762280/1‑70 (MQ=255) tGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTaag < 1:1313225/70‑1 (MQ=255) gagaTCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTaa > 1:7544108/1‑68 (MQ=255) aTCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGaaa > 1:4252253/1‑48 (MQ=255) aTCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCa < 1:64740/71‑1 (MQ=255) tCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGaa > 1:1769326/1‑46 (MQ=255) tCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGaa > 1:6070334/1‑52 (MQ=255) tCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGaa > 1:1320170/1‑52 (MQ=255) tCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGaa > 1:5651051/1‑52 (MQ=255) tCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCa < 1:4453552/70‑1 (MQ=255) tCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCAt < 1:373207/71‑1 (MQ=255) tCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCAt < 1:4529946/71‑1 (MQ=255) tCGATATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCAt < 1:5550568/71‑1 (MQ=255) gCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGtt > 1:7539206/1‑60 (MQ=255) gCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATcg > 1:4934966/1‑71 (MQ=255) tGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATcgcg < 1:7232756/69‑1 (MQ=255) tGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATcgcg < 1:420465/69‑1 (MQ=255) tGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGaa < 1:1150665/71‑1 (MQ=255) gAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAg > 1:4617795/1‑71 (MQ=255) aaaTATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGc > 1:5983202/1‑61 (MQ=255) aaaTATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAg < 1:4588037/70‑1 (MQ=255) tatCAACAACTTGAAAATCTTGAAAGCGgttgatatttcatagcgatctca > 1:4225627‑M2/1‑28 (MQ=255) tCAACAACTTGAAAATCTTGAAAGCGgttgatatttcatagcgatctcaat < 1:1660686‑M2/51‑26 (MQ=255) tCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAg < 1:6867967/70‑1 (MQ=255) caacaaCTTGAAAATCTTGAAAGCGgttgatatttcatagcgatctcaatgttaccgtg < 1:1358955‑M2/59‑35 (MQ=255) caacaaCTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGt > 1:6824536/1‑70 (MQ=255) aacaacTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCa > 1:5825300/1‑55 (MQ=255) acTTGAAAATCTTGAAAGCGgttgatatttcatagcgatctcaatgttaccgtgtaactctttacagaata > 1:1899578‑M2/1‑20 (MQ=255) acTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCt > 1:4996960/1‑39 (MQ=255) acTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCt > 1:1889484/1‑39 (MQ=255) acTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCt > 1:1898877/1‑39 (MQ=255) cTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTAt < 1:4433893/36‑1 (MQ=255) cTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTgg > 1:3689900/1‑40 (MQ=255) ttGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAAt < 1:1285305/67‑1 (MQ=255) gAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTaag > 1:5974952/1‑42 (MQ=255) gAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAATCCCCCg > 1:4403478/1‑71 (MQ=255) aaaaTCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAATCACCCg < 1:3374928/70‑1 (MQ=255) aaaTCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTa < 1:7929859/61‑1 (MQ=255) aaaTCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTa < 1:5464304/61‑1 (MQ=255) aaTCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAATCACCCGTTa < 1:4756465/71‑1 (MQ=255) ttGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAg > 1:6829017/1‑53 (MQ=255) ttGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAATCACCCGTTACa > 1:4537271/1‑69 (MQ=255) tGAAAGCGGTTGGAAATGGATGTATCTGGTTaagaag > 1:2100507/1‑37 (MQ=255) tGAAAGCGGTTGGAAATGGAAGTATCTGGTTaagaag > 1:4938502/1‑37 (MQ=255) aaaGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAATCACCCGTTAc > 1:7154695/1‑65 (MQ=255) aaaGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAATCACCCGTTAc > 1:2469320/1‑65 (MQ=255) aaaGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAATCACCCGTTACATAGa < 1:7243304/70‑1 (MQ=255) aaGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAATCACCCGTTACATAGAAg > 1:1170261/1‑71 (MQ=255) aGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAATCACCCGTTACATAGAAGc < 1:1846229/71‑1 (MQ=255) gCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAg < 1:3850493/42‑1 (MQ=255) gCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAg < 1:799758/42‑1 (MQ=255) gCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAATCACCCGTTACATAGAAGcc < 1:5484358/71‑1 (MQ=255) | CTGTAAAGAGTTACACGGTAACATTGAGATCGCTATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAATCACCCGTTACATAGAAGCC > W3110S.gb/1018873‑1019008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |