New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	= 1550651	56 (0.690)	3 (0.040)	3/84	NT	5.0%	coding (1537/3048 nt)	fdnG	formate dehydrogenase‑N, alpha subunit, nitrate‑inducible
	?	W3110S.gb	= 1550666	66 (0.950)					coding (1552/3048 nt)	fdnG	formate dehydrogenase‑N, alpha subunit, nitrate‑inducible

AAAGCGACGCTGGCTGATCAGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/1550576‑1550651 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctttctGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGTAGTTCAC  <  W3110S.gb/1550666‑1550597                                                                                                                                                    AAAGCGACGCTGGCTGATCAGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATC                                                                             >  1:1674330/1‑71   AGCGACGCTGGCTGATCAGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTT                                                                           >  1:6780999/1‑71   AGCGACGCTGGCTGATCAGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTT                                                                           <  1:4923812/71‑1                    AGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTT                                                                          >  1:3275304/1‑55                           CTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTGCGCGGCATCGCCATAGAAAG                                                   <  1:1331472/71‑1                           CTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAAT                                                                              >  1:6668146/1‑44                                              AAGTTCTTCGTTAGCCTGATGAAATCTTTCTGCGCGGCATCGCCATAGAAAGA                                                  >  1:1577912/1‑53                                                      CGTTAGCCTGATGAAATCTTTCTGCGCGGCATCGCCATAGA                                                      >  1:2964530/1‑41                                                                      TCTTTCTGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAG          >  1:3658928/1‑69                                                                      TCTTTCTGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAAC                                   <  1:4544296/44‑1                                                                       CTTTCTGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCA           >  1:2059428/1‑67                                                                        TTTCTGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGT         <  1:3938126/68‑1                                                                         TTCTGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGTAGTT     >  1:6476744/1‑71                                                                         TTCTGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGTAGT      >  1:5373240/1‑70                                                                          TCTGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGTAG       <  1:4067060/68‑1                                                                           CTGCGCGGCATCGCCATAGAAAGATTTCATGAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGTAGTTC    <  1:7055282/70‑1                                                                           CTGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGTAGTTC    <  1:4685845/70‑1                                                                           CTGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGTAGTT     >  1:6733779/1‑69                                                                           CTGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGTAGTT     >  1:6741949/1‑69                                                                           CTGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGTAGTT     >  1:2023473/1‑69                                                                           CTGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGTAGTT     >  1:6862867/1‑69                                                                           CTGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGTAGTT     >  1:7790054/1‑69                                                                           CTGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGTAGTT     >  1:785035/1‑69                                                                            TGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGTAGTTCAC  >  1:5514133/1‑71                                                                                                                                                    AAAGCGACGCTGGCTGATCAGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/1550576‑1550651 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctttctGCGCGGCATCGCCATAGAAAGATTTCATCAGGCTAACGAAGAACTTCGGATAGTTGCTCCAGTAGTTCAC  <  W3110S.gb/1550666‑1550597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.