| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1550651 | 56 (0.690) | 3 (0.040) | 3/84 | NT | 5.0% | coding (1537/3048 nt) | fdnG | formate dehydrogenase‑N, alpha subunit, nitrate‑inducible |
| ? | W3110S.gb | = 1550666 | 66 (0.950) | coding (1552/3048 nt) | fdnG | formate dehydrogenase‑N, alpha subunit, nitrate‑inducible | |||||
GTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTACGACGTCATCAAGTATT > W3110S.gb/1550597‑1550735 | gTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCa > 1:5514133‑M2/1‑70 (MQ=255) gAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCag < 1:4685845‑M2/70‑3 (MQ=255) gAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTCATGAAATCTTTCTATGGCGATGCCGCGCag < 1:7055282‑M2/70‑3 (MQ=255) aaCTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCagaa > 1:6476744‑M2/1‑67 (MQ=255) aaCTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCag > 1:6733779‑M2/1‑67 (MQ=255) aaCTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCag > 1:2023473‑M2/1‑67 (MQ=255) aaCTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCag > 1:6741949‑M2/1‑67 (MQ=255) aaCTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCag > 1:6862867‑M2/1‑67 (MQ=255) aaCTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCag > 1:785035‑M2/1‑67 (MQ=255) aaCTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCag > 1:7790054‑M2/1‑67 (MQ=255) actactGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCagaa > 1:5373240‑M2/1‑66 (MQ=255) ctactGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCaga < 1:4067060‑M2/68‑4 (MQ=255) actGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCagaaa < 1:3938126‑M2/68‑6 (MQ=255) ctGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCagaaaga > 1:3658928‑M2/1‑62 (MQ=255) ctGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAagag > 1:1234454/1‑70 (MQ=255) ctGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAgaga < 1:4282042/71‑1 (MQ=255) ctGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTATATGGCGATGCCGCGCAGAAagag < 1:5645498/70‑1 (MQ=255) tGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCagaaag > 1:2059428‑M2/1‑61 (MQ=255) gAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGaac < 1:4592932/70‑1 (MQ=255) tCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTgggg < 1:6419282/69‑1 (MQ=255) tCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTgggg < 1:6360655/69‑1 (MQ=255) tCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCt < 1:5659075/71‑1 (MQ=255) cGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTAt > 1:5722319/1‑71 (MQ=255) aGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGAc > 1:1515171/1‑71 (MQ=255) gTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACt < 1:1006785/71‑1 (MQ=255) gTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACt < 1:4209677/71‑1 (MQ=255) ttcttcGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTg < 1:5493234/71‑1 (MQ=255) cttcGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTAt < 1:6201637/64‑1 (MQ=255) cttcGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTAt < 1:1484142/64‑1 (MQ=255) cttcGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTgg < 1:3157355/70‑1 (MQ=255) cGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGc < 1:6040903/58‑1 (MQ=255) gTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCagaaaga < 1:4544296‑M2/44‑8 (MQ=255) gTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGcc > 1:5208785/1‑71 (MQ=255) tAGCCTGATGAAATCTTTCTAAGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCg > 1:640565/1‑70 (MQ=255) aGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGa < 1:4642937/70‑1 (MQ=255) ccTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCTAAGt < 1:2062766/71‑1 (MQ=255) ccTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGt < 1:6846915/71‑1 (MQ=255) ccTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGt < 1:164620/71‑1 (MQ=255) ccTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGt < 1:4535300/71‑1 (MQ=255) ccTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGt < 1:6273796/71‑1 (MQ=255) ccTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGt < 1:7708149/71‑1 (MQ=255) ccTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGt < 1:5897816/71‑1 (MQ=255) tgatgaAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTAt > 1:37247/1‑53 (MQ=255) tgatgaAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTgg > 1:5700166/1‑71 (MQ=255) tgatgaAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTgg > 1:98791/1‑71 (MQ=255) atgaAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGa > 1:4158642/1‑71 (MQ=255) atgaAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGa > 1:6167380/1‑71 (MQ=255) atgaAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCAGAAGTGGGa > 1:6908185/1‑71 (MQ=255) tgaAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTgg < 1:6942741/68‑1 (MQ=255) tgaAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGAc < 1:862135/71‑1 (MQ=255) aaaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTAt < 1:4290210/48‑1 (MQ=255) aaaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGa > 1:3787165/1‑61 (MQ=255) aaaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGCGGCTAt < 1:1017176/48‑1 (MQ=255) aaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACt < 1:1355972/39‑1 (MQ=255) aaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACt < 1:7702465/39‑1 (MQ=255) aaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACt < 1:1965337/39‑1 (MQ=255) aaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACt < 1:6071427/39‑1 (MQ=255) aaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAg < 1:5154904/71‑1 (MQ=255) aaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAg < 1:719187/71‑1 (MQ=255) aaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAg < 1:3203941/71‑1 (MQ=255) aTCTTTCTATGGCGATGCCGCGCAGAAAGAGaacaac < 1:3694330/37‑1 (MQ=255) aTCTTTCTATGGCGATGCCGCGCAGAAAGAGaacaac < 1:2202945/37‑1 (MQ=255) aTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGAcc > 1:6301174/1‑68 (MQ=255) tCTTTCTATGGCGATGCCGCGCagaaagatttcatcaggctaacgaagaactt > 1:1577912‑M2/1‑22 (MQ=255) tCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTgg > 1:5420249/1‑39 (MQ=255) cTTTCTATGGCGATGCCGCGCagaaagatttcatcaggctaacgaagaacttcggatagttgctccagtag < 1:1331472‑M2/71‑51 (MQ=255) tttCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGAcc > 1:3121573/1‑70 (MQ=255) ttCTATGGCGATGCCGCGCAGAAAGAGGACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTa > 1:6908801/1‑71 (MQ=255) ttCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTa > 1:3800785/1‑41 (MQ=255) ttCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTAt < 1:4595797/42‑1 (MQ=255) ttCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGc > 1:6658011/1‑49 (MQ=255) tCTATGGCGATGCCGCGCagaaagatttcatcaggctaacg > 1:2964530‑M2/1‑18 (MQ=255) tCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCt < 1:2309139/69‑1 (MQ=255) cTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACt > 1:135068/1‑44 (MQ=255) cTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACt > 1:4235607/1‑44 (MQ=255) cTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACt > 1:5057672/1‑44 (MQ=255) cTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTac > 1:7765823/1‑70 (MQ=255) tATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTacga > 1:5835529/1‑71 (MQ=255) tGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTgg < 1:2004440/55‑1 (MQ=255) tGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTgg < 1:2028780/55‑1 (MQ=255) tGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTacgacg < 1:7560262/71‑1 (MQ=255) tGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTacgacg > 1:7914146/1‑71 (MQ=255) gCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCTaa < 1:382959/49‑1 (MQ=255) gCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGaa < 1:7733064/49‑1 (MQ=255) cGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGa < 1:6460049/36‑1 (MQ=255) gATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGAc < 1:7348914/54‑1 (MQ=255) gATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTACGACGtcat > 1:7760039/1‑71 (MQ=255) ccGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCg > 1:1808454/1‑41 (MQ=255) ccGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTACGACGTCATCaa < 1:2041621/70‑1 (MQ=255) cgcgCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTACGACGTCATCAAg > 1:4209127/1‑70 (MQ=255) cgcAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTACGACGTCATCAAGTAt < 1:5772535/71‑1 (MQ=255) gcAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTACGACGTCATCAAGTAtt > 1:6286911/1‑71 (MQ=255) gcAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTACGACGTCATCAAGTAtt < 1:1468131/71‑1 (MQ=255) gcAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTACGACGTCATCAAGTAtt > 1:6046503/1‑71 (MQ=255) | GTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTACGACGTCATCAAGTATT > W3110S.gb/1550597‑1550735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |