| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1550651 | 56 (0.690) | 3 (0.040) | 3/84 | NT | 5.0% | coding (1537/3048 nt) | fdnG | formate dehydrogenase‑N, alpha subunit, nitrate‑inducible |
| ? | W3110S.gb | = 1550666 | 66 (0.950) | coding (1552/3048 nt) | fdnG | formate dehydrogenase‑N, alpha subunit, nitrate‑inducible | |||||
Only 100 of 114 total aligned reads displayed.
CGCTGGCTGATCAGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTACGA > W3110S.gb/1550583‑1550721 | cGCTGGCTGATCAGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTAt < 1:6140828/71‑1 (MQ=255) gctggctgATCAGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTAt < 1:6344199/70‑1 (MQ=255) gctgATCAGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGa < 1:4967797/71‑1 (MQ=255) gctgATCAGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGa > 1:6977191/1‑71 (MQ=255) ctgATCAGGTGAAGTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGAt < 1:1327374/71‑1 (MQ=255) aTCAGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATg < 1:948841/69‑1 (MQ=255) gAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTa < 1:5769951/54‑1 (MQ=255) gAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCag < 1:4685845‑M2/70‑3 (MQ=255) gAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTCATGAAATCTTTCTATGGCGATGCCGCGCag < 1:7055282‑M2/70‑3 (MQ=255) aaCTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCagaa > 1:6476744‑M2/1‑67 (MQ=255) aaCTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCag > 1:6733779‑M2/1‑67 (MQ=255) aaCTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCag > 1:6741949‑M2/1‑67 (MQ=255) aaCTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCag > 1:2023473‑M2/1‑67 (MQ=255) aaCTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCag > 1:6862867‑M2/1‑67 (MQ=255) aaCTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCag > 1:7790054‑M2/1‑67 (MQ=255) aaCTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCag > 1:785035‑M2/1‑67 (MQ=255) actactGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCagaa > 1:5373240‑M2/1‑66 (MQ=255) ctactGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTgcgcggcatcgccatagaaag < 1:1331472‑M1/71‑22 (MQ=255) ctactGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTa < 1:1421112/51‑1 (MQ=255) ctactGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCaga < 1:4067060‑M2/68‑4 (MQ=255) actGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATg < 1:6066139/51‑1 (MQ=255) actGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCagaaa < 1:3938126‑M2/68‑6 (MQ=255) ctGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATg < 1:5672503/56‑1 (MQ=255) ctGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCcgc < 1:6804748/60‑1 (MQ=255) ctGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCagaaaga > 1:3658928‑M2/1‑62 (MQ=255) ctGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAagag > 1:1234454/1‑70 (MQ=255) ctGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAgaga < 1:4282042/71‑1 (MQ=255) ctGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTATATGGCGATGCCGCGCAGAAagag < 1:5645498/70‑1 (MQ=255) tGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCagaaag > 1:2059428‑M2/1‑61 (MQ=255) aGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGc < 1:5498665/48‑1 (MQ=255) aGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGc < 1:5381913/48‑1 (MQ=255) aGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGc < 1:2486089/48‑1 (MQ=255) tCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTgggg < 1:6360655/69‑1 (MQ=255) tCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTgggg < 1:6419282/69‑1 (MQ=255) tCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCt < 1:5659075/71‑1 (MQ=255) cGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTAt > 1:5722319/1‑71 (MQ=255) aaGTTCTTCGTTAGCCTGATGAAATCTTTCTgcgcggcatcgccatagaaaga > 1:1577912‑M1/1‑31 (MQ=255) aGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGAc > 1:1515171/1‑71 (MQ=255) gTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACt < 1:1006785/71‑1 (MQ=255) gTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACt < 1:4209677/71‑1 (MQ=255) ttcttcGTTAGCCTGATGAAATCTTTCTATGGCGATGCcg < 1:4790609/40‑1 (MQ=255) ttcttcGTTAGCCTGATGAAATCTTTCTATGGCGATGCcg < 1:1069191/40‑1 (MQ=255) ttcttcGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTg < 1:5493234/71‑1 (MQ=255) cttcGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTAt < 1:6201637/64‑1 (MQ=255) cttcGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTAt < 1:1484142/64‑1 (MQ=255) cttcGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTgg < 1:3157355/70‑1 (MQ=255) cGTTAGCCTGATGAAATCTTTCTgcgcggcatcgccataga > 1:2964530‑M1/1‑23 (MQ=255) cGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGc < 1:6040903/58‑1 (MQ=255) gTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCagaaaga < 1:4544296‑M2/44‑8 (MQ=255) gTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGcc > 1:5208785/1‑71 (MQ=255) tAGCCTGATGAAATCTTTCTAAGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCg > 1:640565/1‑70 (MQ=255) aGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGa < 1:4642937/70‑1 (MQ=255) ccTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCTAAGt < 1:2062766/71‑1 (MQ=255) ccTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGt < 1:6846915/71‑1 (MQ=255) ccTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGt < 1:6273796/71‑1 (MQ=255) ccTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGt < 1:4535300/71‑1 (MQ=255) ccTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGt < 1:164620/71‑1 (MQ=255) tgatgaAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTAt > 1:37247/1‑53 (MQ=255) tgatgaAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTgg > 1:5700166/1‑71 (MQ=255) atgaAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGa > 1:6167380/1‑71 (MQ=255) tgaAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTgg < 1:6942741/68‑1 (MQ=255) tgaAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGAc < 1:862135/71‑1 (MQ=255) aaaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTAt < 1:4290210/48‑1 (MQ=255) aaaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGa > 1:3787165/1‑61 (MQ=255) aaaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGCGGCTAt < 1:1017176/48‑1 (MQ=255) aaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACt < 1:6071427/39‑1 (MQ=255) aaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACt < 1:7702465/39‑1 (MQ=255) aaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACt < 1:1965337/39‑1 (MQ=255) aaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAg < 1:719187/71‑1 (MQ=255) aaTCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAg < 1:3203941/71‑1 (MQ=255) aTCTTTCTATGGCGATGCCGCGCAGAAAGAGaacaac < 1:2202945/37‑1 (MQ=255) tCTTTCTgcgcggcatcgccatagaaagatttcatcaggctaacgaagaacttcggatagttgctccag > 1:3658928‑M1/1‑7 (MQ=255) tCTTTCTgcgcggcatcgccatagaaagatttcatcaggctaac < 1:4544296‑M1/44‑38 (MQ=255) tCTTTCTATGGCGATGCCGCGCagaaagatttcatcaggctaacgaagaactt > 1:1577912‑M2/1‑22 (MQ=255) tCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTgg > 1:5420249/1‑39 (MQ=255) cTTTCTgcgcggcatcgccatagaaagatttcatcaggctaacgaagaacttcggatagttgctcca > 1:2059428‑M1/1‑6 (MQ=255) cTTTCTATGGCGATGCCGCGCagaaagatttcatcaggctaacgaagaacttcggatagttgctccagtag < 1:1331472‑M2/71‑51 (MQ=255) tttCTgcgcggcatcgccatagaaagatttcatcaggctaacgaagaacttcggatagttgctccagt < 1:3938126‑M1/68‑64 (MQ=255) tttCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGAcc > 1:3121573/1‑70 (MQ=255) ttCTgcgcggcatcgccatagaaagatttcatcaggctaacgaagaacttcggatagttgctccagtagtt > 1:6476744‑M1/1‑4 (MQ=255) ttCTgcgcggcatcgccatagaaagatttcatcaggctaacgaagaacttcggatagttgctccagtagt > 1:5373240‑M1/1‑4 (MQ=255) ttCTATGGCGATGCCGCGCAGAAAGAGGACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTa > 1:6908801/1‑71 (MQ=255) ttCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTa > 1:3800785/1‑41 (MQ=255) ttCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTAt < 1:4595797/42‑1 (MQ=255) ttCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGc > 1:6658011/1‑49 (MQ=255) tCTgcgcggcatcgccatagaaagatttcatcaggctaacgaagaacttcggatagttgctccagtag < 1:4067060‑M1/68‑66 (MQ=255) tCTATGGCGATGCCGCGCagaaagatttcatcaggctaacg > 1:2964530‑M2/1‑18 (MQ=255) tCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCt < 1:2309139/69‑1 (MQ=255) cTgcgcggcatcgccatagaaagatttcatgaggctaacgaagaacttcggatagttgctccagtagttc < 1:7055282‑M1/70‑69 (MQ=255) cTgcgcggcatcgccatagaaagatttcatcaggctaacgaagaacttcggatagttgctccagtagttc < 1:4685845‑M1/70‑69 (MQ=255) cTgcgcggcatcgccatagaaagatttcatcaggctaacgaagaacttcggatagttgctccagtagtt > 1:6862867‑M1/1‑2 (MQ=255) cTgcgcggcatcgccatagaaagatttcatcaggctaacgaagaacttcggatagttgctccagtagtt > 1:6741949‑M1/1‑2 (MQ=255) cTgcgcggcatcgccatagaaagatttcatcaggctaacgaagaacttcggatagttgctccagtagtt > 1:7790054‑M1/1‑2 (MQ=255) cTgcgcggcatcgccatagaaagatttcatcaggctaacgaagaacttcggatagttgctccagtagtt > 1:785035‑M1/1‑2 (MQ=255) cTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACt > 1:4235607/1‑44 (MQ=255) cTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACt > 1:135068/1‑44 (MQ=255) cTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACt > 1:5057672/1‑44 (MQ=255) cTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTac > 1:7765823/1‑70 (MQ=255) tgcgcggcatcgccatagaaagatttcatcaggctaacgaagaacttcggatagttgctccagtagttcac > 1:5514133‑M1/1‑1 (MQ=255) tATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTacga > 1:5835529/1‑71 (MQ=255) | CGCTGGCTGATCAGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTACGA > W3110S.gb/1550583‑1550721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |