| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2989729 = | 121 (1.490) | 11 (0.160) | 4/84 | NT | 9.8% | intergenic (+73/‑195) | ygeF/ygeG | hypothetical protein/predicted chaperone |
| ? | W3110S.gb | 2989750 = | 99 (1.420) | intergenic (+94/‑174) | ygeF/ygeG | hypothetical protein/predicted chaperone | |||||
TCATTATTGGTAAAAGTACTGTTCACTACAAACTAATAACATCATTAGTTGTTTTACTAATATTCACCTTATTAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/2989804‑2989729‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattagtAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAGTACTTTTACCAATAATGAAAAATATACCATAA > W3110S.gb/2989750‑2989818 TCATTATTGGTAAAAGTACTGTTCACTACAAACTAATAACATCATTAGTTGTTTTACTAATATTCACCTTA > 1:4339463/1‑71 CATTATTGGTAAAAGTACTGTTCACTACAAACTAATAACATCATTAGTTGTTTTACTAATATTCACCTTAT > 1:4714750/1‑71 CATTATTGGTAAAAGTACTGTTCACTACAAACTAATAACATCATTAGTTGTTTTACTAATATTCACCTTAT > 1:3825093/1‑71 CATTATTGGTAAAAGTACTGTTCACTACAAACTAATAACATCATTAGTTGTTTTACTAATATTCACCTTA > 1:4536228/1‑70 TTATTGGTAAAAGTACTGTTCACTACAAACTAATAACATCATTAGTTGTTTTACTAATATTCACCTTATTA < 1:2644328/71‑1 TATTGGTAAAAGTACTGTTCACTACAAACTAATAACATCATTAGTTGTTTTACTAATATTCACCTTATTAG > 1:233585/1‑71 ATTGGTAAAAGTACTGTTCACTACAAACTAATAACATCATTAGTTGTTTTACTAATATTCACCTTATTAG < 1:6798640/70‑1 CAAACTAATAACATCATTAGTTGTTTTACTAATATTCACCTTA > 1:1996831/1‑43 CAAACTAATAACATCATTAGTTGTTTTACTAATATTCACCTTA > 1:4446878/1‑43 CAAACTAATAACATCATTAGTTGTTTTACTAATATTCACCTTA > 1:2632434/1‑43 ACTAATAACATCATTAGTTGTTTTACTAATATTCACCTTATT > 1:7413568/1‑42 TAATAACATCATTAGTTGTTTTACTAATATTCACCTTATTAG < 1:1341320/42‑1 CATTAGTTGTTTTACTAATATTCACCTTATTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAG > 1:1018975/1‑71 TACTAATATTCACCTTATTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTG < 1:3693858/54‑1 TACTAATATTCACCTTATTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTG < 1:7230425/54‑1 TACTAATATTCACCTTATTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTG < 1:6936308/54‑1 TACTAATATTCACCTTATTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTG < 1:4358309/54‑1 TACTAATATTCACCTTATTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTG < 1:463129/54‑1 ACTAATATTCACCTTATTAGTAAAACAACTAATGATGTTATTAGTTTGTA > 1:7669012/1‑50 ACTAATATTCACCTTATTAGTAAAACAACTAATGATGTTATTAGTTTGTA > 1:5734591/1‑50 CTAATATTCACCTTATTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAA > 1:3309812/1‑54 CTAATATTCACCTTATTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAA > 1:7482013/1‑54 CTAATATTCACCTTATTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAA > 1:7374125/1‑54 TATTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAGTACTTTTACCAATAATGAAAAATATAC > 1:3292339/1‑71 TATTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAGTACTTTTACCAATAATGAAAAATATAC > 1:6151691/1‑71 TATTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAA < 1:2035588/41‑1 TATTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAA < 1:5696471/41‑1 TATTAGTAAAACAACTAATGATGTTATTAGTTTGTAG < 1:7243923/37‑1 TATTAGTAAAACAACTAATGATGTTATTAGTTTGTAG < 1:4269804/37‑1 ATTAGTAAAACAACTAATGATGTTATTAGTTTGTAG < 1:5382800/36‑1 TTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAGTACTTTTACCAATAATGAAAAATATACCA < 1:17849/71‑1 TTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAGTACTTTTACCAATAATGAAAAATATACCA < 1:1602567/71‑1 TTAGTAAAACAACTAATGATGTTATTAGTTTGTAGTG > 1:5352473/1‑37 TAGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAGTACTTTTACCAATAATGAAAAATATACCA > 1:7203882/1‑70 AGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAGTACTTTTACCAATAATGAAAAATATACCAT > 1:1970110/1‑70 AGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAGTACTTTTACCAATAATGAAAAATATACCAT > 1:6045897/1‑70 AGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAAC > 1:4638913/1‑38 AGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAAC > 1:3911338/1‑38 AGTAAAACAACTAATGATGTTATTAGTTTGTAGTGAAC > 1:4648101/1‑38 GTAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAGTACTTTTACCAATAATGAAAAATATACCATAA < 1:2085630/71‑1 GTAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAGTACTTTTACCAATAATGAAAAATATACCATAA < 1:2311225/71‑1 GTAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAGTACTTTTACCAATAATGAAAAATATACCAT > 1:3479702/1‑69 TAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAGTACTTTTACCAATAATGA < 1:3801934/56‑1 TAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAGTACTTTTACCAATAATGA < 1:4817907/56‑1 TCATTATTGGTAAAAGTACTGTTCACTACAAACTAATAACATCATTAGTTGTTTTACTAATATTCACCTTATTAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/2989804‑2989729‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattagtAAAACAACTAATGATGTTATTAGTTTGTAGTGAACAGTACTTTTACCAATAATGAAAAATATACCATAA > W3110S.gb/2989750‑2989818 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |