mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2518066 | 49 (0.800) | 4 (0.080) +CTTGAGA |
3/84 | NT | 8.6% | coding (1009/2109 nt) | spoT | bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
| ? | minE | 2715817 = | 51 (0.830) | intergenic (‑14/‑257) | tsgA/ppiA | predicted transporter/peptidyl‑prolyl cis‑trans isomerase A | |||||
| * | ? | minE | 2068717 = | 90 (1.470) | 5 (0.090) +ACTG |
3/90 | NT | 8.4% | coding (1073/1521 nt) | aer | fused signal transducer for aerotaxis sensory component and methyl accepting chemotaxis component |
| ? | minE | 2786335 = | 29 (0.470) | coding (784/873 nt) | yjbC | 23S rRNA pseudouridine synthase | |||||
| * | ? | minE | 1710515 = | 48 (0.780) | 6 (0.110) +GGGTAT |
3/86 | NT | 10.7% | coding (533/1512 nt) | yphE | fused predicted sugar transporter subunits and ATP‑binding components of ABC superfamily |
| ? | minE | = 2983235 | 66 (1.080) | coding (250/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB, regulator of the CreBC regulon | |||||
| * | ? | minE | = 1370700 | 103 (1.680) | 5 (0.090) +ACTG |
3/90 | NT | 7.6% | coding (653/696 nt) | yohK | predicted inner membrane protein |
| ? | minE | 2786335 = | 29 (0.470) | coding (784/873 nt) | yjbC | 23S rRNA pseudouridine synthase | |||||
| * | ? | minE | 19620 = | 64 (1.040) | 7 (0.130) +GTGACT |
3/86 | NT | 11.6% | coding (536/942 nt) | ribF | bifunctional riboflavin kinase and FAD synthetase |
| ? | minE | = 2548513 | 58 (0.940) | coding (722/858 nt) | htrL | hypothetical protein | |||||