| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1611749 = | 5 (0.080) | 23 (0.440) +ATGCGGT |
12/86 | NT | 49.8% | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | minE | = 2603083 | 49 (0.800) | coding (684/753 nt) | yhiQ | predicted SAM‑dependent methyltransferase | |||||
TGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1611815‑1611749‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCGCCAGCGGTGGCGCGTA < minE/2603083‑2603063 ||||||| TGGTACACCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGC > 1:6166/1‑71 GGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCG > 1:3299394/1‑71 GGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCG > 1:1657833/1‑71 GGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCG > 1:2432117/1‑71 GGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCG > 1:2287025/1‑71 GGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATCTCCTTCCTGAATGCG > 1:44688/1‑71 GTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGG < 1:1028495/71‑1 CCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCTTTCCTGAATGCGGTATTC < 1:40564/71‑1 CCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTC < 1:2909449/71‑1 CTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCG > 1:2894113/1‑71 TCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCG > 1:3815078/1‑70 CTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTA < 1:743810/65‑1 CTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTA < 1:2550172/65‑1 CTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTA < 1:3020272/65‑1 TTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCC < 1:2873956/68‑1 TTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCG > 1:432136/1‑71 TTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCG > 1:3414289/1‑71 TTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCG > 1:3307650/1‑71 TTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCG > 1:1572186/1‑71 TTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCG > 1:2866190/1‑71 GGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGG < 1:2103028/70‑1 GCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTG < 1:3311731/71‑1 CGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGG > 1:817275/1‑71 GGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGC < 1:3429319/71‑1 GGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGC < 1:3790576/71‑1 GATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGC > 1:1672684/1‑70 ATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGC > 1:278546/1‑69 ATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGC > 1:3605534/1‑69 CGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCtg > 1:972942/1‑69 CGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCtg > 1:1902084/1‑69 CGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCG > 1:2308973/1‑62 GGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCtgg < 1:1755577/71‑4 TGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAG > 1:2063932/1‑42 GAAATCACTCGCATTTCCTTCCTGAATGCGGTATT > 1:562406/1‑35 AAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGC > 1:3786129/1‑49 AAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGC > 1:863543/1‑49 ACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCtg > 1:3547264/1‑44 ACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGG > 1:3455802/1‑41 ||||||| TGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1611815‑1611749‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCGCCAGCGGTGGCGCGTA < minE/2603083‑2603063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |