| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1611749 = | 5 (0.080) | 23 (0.440) +ATGCGGT |
12/86 | NT | 49.8% | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | minE | = 2603083 | 49 (0.800) | coding (684/753 nt) | yhiQ | predicted SAM‑dependent methyltransferase | |||||
GCCTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGTAA > minE/2603014‑2603152 | gCCTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATg < 1:3430747/71‑1 (MQ=255) ccTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGt < 1:6005/71‑1 (MQ=255) gCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcgc > 1:1938469/1‑71 (MQ=255) cACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcgc < 1:3390931/70‑1 (MQ=255) cACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcgc < 1:2385134/70‑1 (MQ=255) cGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcgccac < 1:432892/71‑1 (MQ=255) gCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcgccacgcc < 1:2361833/69‑1 (MQ=255) ccAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTa < 1:3548515/71‑1 (MQ=255) cAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcg < 1:1745516/53‑1 (MQ=255) cAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAg > 1:311821/1‑71 (MQ=255) gcgTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCAc > 1:2985199/1‑70 (MQ=255) tggtAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCgg < 1:1748553/57‑1 (MQ=255) tggtAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCgg < 1:681033/57‑1 (MQ=255) gtAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCa > 1:2581958/1‑71 (MQ=255) gtAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCa > 1:3838781/1‑71 (MQ=255) tAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCAc < 1:3476176/61‑1 (MQ=255) tAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCAt > 1:1720082/1‑71 (MQ=255) tAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCAt < 1:3670190/71‑1 (MQ=255) aaaGCGCCCGGACTACGCGCCACCGCTGGCGAATg < 1:2261277/35‑1 (MQ=255) cgcCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTa > 1:2399675/1‑51 (MQ=255) cgcCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTa > 1:1882028/1‑51 (MQ=255) gcCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGAGGTAGTCACTAAAGGGCATCGCtt > 1:2440289/1‑70 (MQ=255) ccGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTaa < 1:655794/56‑1 (MQ=255) ccGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGa < 1:1638330/71‑1 (MQ=255) cGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGat < 1:3464946/71‑1 (MQ=255) cGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGat < 1:3622790/71‑1 (MQ=255) cGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGat < 1:1389398/71‑1 (MQ=255) cGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGat < 1:762321/71‑1 (MQ=255) ggACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACt > 1:188102/1‑52 (MQ=255) gACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGatat < 1:1845498/71‑1 (MQ=255) tACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTa > 1:147750/1‑71 (MQ=255) ccagcgccacCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaacc < 1:1755577‑M2/68‑51 (MQ=255) cagcgccaCCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccg > 1:1902084‑M2/3‑20 (MQ=255) cagcgccaCCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccg > 1:972942‑M2/3‑20 (MQ=255) cagcgccaCCGCTGGCGAATaccgcattcaggaaggaaatgcgagt > 1:3547264‑M2/3‑20 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGa > 1:2985168/1‑63 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGa > 1:3668626/1‑63 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTAt < 1:2448024/70‑1 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg > 1:2987082/1‑71 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg > 1:3122811/1‑71 (MQ=255) gcgcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgattt > 1:863543‑M2/1‑18 (MQ=255) gcgcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgattt > 1:3786129‑M2/1‑18 (MQ=255) gcgcCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg > 1:974405/1‑70 (MQ=255) gcgcCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg > 1:926977/1‑70 (MQ=255) gcgcCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg > 1:544049/1‑70 (MQ=255) cgcCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCa < 1:1965120/71‑1 (MQ=255) gcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatcc < 1:3790576‑M2/71‑56 (MQ=255) gcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatcc < 1:3429319‑M2/71‑56 (MQ=255) gcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatc > 1:1672684‑M2/1‑16 (MQ=255) gcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgat > 1:278546‑M2/1‑16 (MQ=255) gcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgat > 1:3605534‑M2/1‑16 (MQ=255) gcCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAg > 1:3500728/1‑71 (MQ=255) gcCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAg > 1:3393510/1‑71 (MQ=255) ccACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccg > 1:817275‑M2/1‑15 (MQ=255) ccACCGCTGGCGAATaccgcattcaggaaggaaatgcgagt > 1:3455802‑M2/1‑15 (MQ=255) cACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgc < 1:3311731‑M2/71‑58 (MQ=255) cACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAgg > 1:125642/1‑70 (MQ=255) aCCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTaaa > 1:2390874/1‑43 (MQ=255) ccGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcc < 1:2103028‑M2/70‑59 (MQ=255) cGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaa > 1:2866190‑M2/1‑11 (MQ=255) cGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaa > 1:432136‑M2/1‑11 (MQ=255) cGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaa > 1:3414289‑M2/1‑11 (MQ=255) cGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaa > 1:3307650‑M2/1‑11 (MQ=255) cGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaa > 1:1572186‑M2/1‑11 (MQ=255) cGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccg > 1:2308973‑M2/1‑11 (MQ=255) gCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACt < 1:1570314/37‑1 (MQ=255) gCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGc > 1:1744369/1‑71 (MQ=255) gCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGc > 1:1273472/1‑71 (MQ=255) gCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGc < 1:263443/71‑1 (MQ=255) cTGGCGAATaccgcattcaggaaggaaatgcgagtgatttca > 1:2063932‑M2/1‑9 (MQ=255) cTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTa > 1:2103546/1‑37 (MQ=255) cTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTa > 1:2189060/1‑37 (MQ=255) ggCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa < 1:2873956‑M2/68‑62 (MQ=255) ggCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTAt > 1:2515813/1‑58 (MQ=255) ggCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTAt > 1:2434849/1‑58 (MQ=255) ggCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTAt > 1:214111/1‑58 (MQ=255) ggCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAg > 1:2601785/1‑71 (MQ=255) gCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCa < 1:1404992/69‑1 (MQ=255) gCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAgt < 1:2759376/71‑1 (MQ=255) cGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagag > 1:2894113‑M2/1‑5 (MQ=255) cGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaaga > 1:3815078‑M2/1‑5 (MQ=255) gAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagagg < 1:2909449‑M2/71‑68 (MQ=255) gAATaccgcattcaggaaagaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagagg < 1:40564‑M2/71‑68 (MQ=255) gAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAgtgt < 1:2643529/71‑1 (MQ=255) gAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAgtgt < 1:3372088/71‑1 (MQ=255) gAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAgtgt < 1:1430428/71‑1 (MQ=255) gAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAgtg > 1:1201589/1‑70 (MQ=255) aaTaccgcattcaggaaggaaatgcgagtgatttc > 1:562406‑M2/1‑3 (MQ=255) aaTGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTa > 1:2585924/1‑53 (MQ=255) aaTGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAgtgt > 1:281138/1‑70 (MQ=255) aaTGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGAAGGTACGCCAgtgt > 1:3799429/1‑70 (MQ=255) aTGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGtaa < 1:1727287/71‑1 (MQ=255) aTGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGta > 1:3768006/1‑70 (MQ=255) aTGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTCta > 1:1005039/1‑70 (MQ=255) taccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaag < 1:743810‑M2/65‑65 (MQ=255) taccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaag < 1:2550172‑M2/65‑65 (MQ=255) taccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaag < 1:3020272‑M2/65‑65 (MQ=255) | GCCTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGTAA > minE/2603014‑2603152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |