| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1611749 = | 5 (0.080) | 23 (0.440) +ATGCGGT |
12/86 | NT | 49.8% | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | minE | = 2603083 | 49 (0.800) | coding (684/753 nt) | yhiQ | predicted SAM‑dependent methyltransferase | |||||
TCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCA > minE/1611682‑1611815 | tctTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCag > 1:600814/1‑71 (MQ=255) ctTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCag > 1:2175503/1‑70 (MQ=255) ctTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCag > 1:1730134/1‑70 (MQ=255) ttttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagg > 1:2906945/1‑70 (MQ=255) ttttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTCCCCTCag < 1:2476512/69‑1 (MQ=255) ttACATCCTTAAACTGATATACATTGCCGAACTATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagg < 1:2454475/68‑1 (MQ=255) ttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagg < 1:1571530/68‑1 (MQ=255) cATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaa > 1:583448‑M2/1‑68 (MQ=255) tCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcg > 1:400098‑M2/1‑66 (MQ=255) cTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat > 1:3739663‑M2/1‑64 (MQ=255) ttAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat < 1:1220312‑M2/70‑8 (MQ=255) ttAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat < 1:2284564‑M2/70‑8 (MQ=255) ttAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat < 1:592652‑M2/70‑8 (MQ=255) tAAACTGATATACATTGCGGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatga < 1:1715330‑M2/71‑10 (MQ=255) aaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgatt > 1:2322489‑M2/1‑60 (MQ=255) aaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgatt > 1:1974547‑M2/1‑60 (MQ=255) aaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgatt < 1:2730875‑M2/71‑12 (MQ=255) aaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatga < 1:2488745‑M2/69‑10 (MQ=255) aCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattg > 1:3610641‑M2/1‑59 (MQ=255) aCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattg > 1:1108235‑M2/1‑59 (MQ=255) gATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat > 1:3555848‑M2/1‑56 (MQ=255) gATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat > 1:16474‑M2/1‑56 (MQ=255) atatACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggca > 1:3642356‑M2/1‑55 (MQ=255) tataCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatt > 1:2170814‑M2/1‑54 (MQ=255) taCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTc < 1:2679384/46‑1 (MQ=255) taCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTc < 1:1645473/46‑1 (MQ=255) taCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaag < 1:35003/52‑1 (MQ=255) taCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaag < 1:6583/52‑1 (MQ=255) taCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaag < 1:680419/52‑1 (MQ=255) taCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaag < 1:1164927/52‑1 (MQ=255) taCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttt > 1:2776073‑M2/1‑52 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTc > 1:3829126/1‑44 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaa > 1:709000/1‑49 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCag > 1:125791/1‑46 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCag > 1:2525361/1‑46 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatga < 1:2468388‑M2/59‑10 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat < 1:1710037‑M2/57‑8 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat < 1:189704‑M2/57‑8 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat < 1:519784‑M2/57‑8 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat < 1:2350406‑M2/57‑8 (MQ=255) aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca > 1:84741‑M2/1‑49 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatc > 1:2291776‑M2/1‑48 (MQ=255) tGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggca < 1:3811803‑M2/62‑16 (MQ=255) tGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggca < 1:1199692‑M2/62‑16 (MQ=255) gAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGa > 1:480021‑M2/1‑43 (MQ=255) aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaat > 1:2050921‑M2/1‑42 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcg > 1:1183611‑M2/1‑37 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcg > 1:199865‑M2/1‑37 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcg > 1:930765‑M2/1‑37 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcg > 1:1294641‑M2/1‑37 (MQ=255) ccagcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc < 1:1755577‑M1/43‑1 (MQ=255) tgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat < 1:929206‑M2/42‑8 (MQ=255) tgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat < 1:591225‑M2/42‑8 (MQ=255) tgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat < 1:1269844‑M2/42‑8 (MQ=255) tgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat < 1:2702419‑M2/42‑8 (MQ=255) tgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat < 1:2630830‑M2/42‑8 (MQ=255) cagcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGt > 1:3547264‑M1/28‑46 (MQ=255) cagcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCg > 1:1902084‑M1/28‑71 (MQ=255) cagcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCg > 1:972942‑M1/28‑71 (MQ=255) gcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGAttt > 1:863543‑M1/26‑49 (MQ=255) gcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGAttt > 1:3786129‑M1/26‑49 (MQ=255) gccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAt > 1:3605534‑M1/24‑69 (MQ=255) gccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAt > 1:278546‑M1/24‑69 (MQ=255) gccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATcc < 1:3790576‑M1/48‑1 (MQ=255) gccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATcc < 1:3429319‑M1/48‑1 (MQ=255) gccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATc > 1:1672684‑M1/24‑70 (MQ=255) tttAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatga < 1:2133507‑M2/39‑10 (MQ=255) tttAGTTTCATAAGTCGTTCCCTCAGGAAGaatcga > 1:2772974‑M2/1‑30 (MQ=255) ccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGt > 1:3455802‑M1/23‑41 (MQ=255) ccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCg > 1:817275‑M1/23‑71 (MQ=255) caccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGc < 1:3311731‑M1/50‑1 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgat < 1:3215183‑M2/38‑11 (MQ=255) ccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGcc < 1:2103028‑M1/51‑1 (MQ=255) cgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCg > 1:2308973‑M1/19‑62 (MQ=255) cgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa > 1:3307650‑M1/19‑71 (MQ=255) cgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa > 1:3414289‑M1/19‑71 (MQ=255) cgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa > 1:1572186‑M1/19‑71 (MQ=255) cgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa > 1:2866190‑M1/19‑71 (MQ=255) cgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa > 1:432136‑M1/19‑71 (MQ=255) ctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTtca > 1:2063932‑M1/17‑42 (MQ=255) tCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt > 1:2079405‑M2/1‑23 (MQ=255) ggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa < 1:2873956‑M1/54‑1 (MQ=255) cATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattt < 1:2658309‑M2/40‑19 (MQ=255) cgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAagag > 1:2894113‑M1/13‑71 (MQ=255) cgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAaga > 1:3815078‑M1/13‑70 (MQ=255) gaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAgg < 1:2909449‑M1/60‑1 (MQ=255) gaataccgcatTCAGGAAAGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAgg < 1:40564‑M1/60‑1 (MQ=255) aaGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca > 1:1709854‑M2/1‑19 (MQ=255) aataccgcatTCAGGAAGGAAATGCGAGTGATTtc > 1:562406‑M1/11‑35 (MQ=255) aGTCGTTCCCTCAGGAAGaatcgttgattggcattttt > 1:2877343‑M2/1‑18 (MQ=255) taccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAag < 1:2550172‑M1/57‑1 (MQ=255) taccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAag < 1:743810‑M1/57‑1 (MQ=255) taccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAag < 1:3020272‑M1/57‑1 (MQ=255) ccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAc < 1:1028495‑M1/65‑1 (MQ=255) cgcatTCAGGAAGGAGATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc > 1:44688‑M1/6‑71 (MQ=255) cgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc > 1:2432117‑M1/6‑71 (MQ=255) cgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc > 1:3299394‑M1/6‑71 (MQ=255) cgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc > 1:1657833‑M1/6‑71 (MQ=255) cgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc > 1:2287025‑M1/6‑71 (MQ=255) gcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGTGTACCa > 1:6166‑M1/5‑71 (MQ=255) | TCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCA > minE/1611682‑1611815 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |