| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2267011 = | 89 (1.450) | 5 (0.090) | 3/90 | NT | 7.3% | intergenic (‑12/‑350) | thrU/coaA | tRNA‑Thr/pantothenate kinase |
| ? | minE | 2267032 = | 46 (0.840) | intergenic (‑33/‑329) | thrU/coaA | tRNA‑Thr/pantothenate kinase | |||||
Only 100 of 113 total aligned reads displayed.
CGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATT > minE/2266943‑2267078 | tttcttcatcgtgtcgcataaaatgtgaccaataaaacaaattatgcaattttttagttgcatgaactCGc > 1:3114291‑M1/69‑71 (MQ=255) ttcttcatcgtgtcgcataaaatgtgaccaataaaacaaattatgcaattttttagttgcatgaactCGCa < 1:3102872‑M1/4‑1 (MQ=255) tcttcatcgtgtcgcataaaatgtgaccaataaaacaaattatgcaattttttagttgcatgaactCGCAt < 1:2638546‑M1/5‑1 (MQ=255) cTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAgcgcgct < 1:1733906/68‑2 (MQ=255) cTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCa < 1:3223500/68‑1 (MQ=255) cTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCa < 1:2611364/68‑1 (MQ=255) tGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATg < 1:888219/71‑1 (MQ=255) tGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATg < 1:1145139/71‑1 (MQ=255) tGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATg < 1:2206813/71‑1 (MQ=255) tGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATg < 1:1296164/71‑1 (MQ=255) agACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAgcgcg < 1:3305838/61‑1 (MQ=255) cTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGgaga > 1:1588146/1‑71 (MQ=255) tACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCt < 1:3082243/63‑1 (MQ=255) aCTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACa > 1:2130325/1‑71 (MQ=255) aCTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACa > 1:226738/1‑71 (MQ=255) aCTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACa > 1:1926066/1‑71 (MQ=255) aCTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACa > 1:2055885/1‑71 (MQ=255) gcataaaatgtgaccaataaaacaaattatgcaattttttagttgcatgaactCGc > 1:3619389‑M1/54‑56 (MQ=255) cTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCa > 1:3053824/1‑57 (MQ=255) cTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACAt < 1:451228/71‑1 (MQ=255) cTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACAt > 1:3159802/1‑71 (MQ=255) cTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACAt < 1:1777549/71‑1 (MQ=255) tGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATg > 1:3737552/1‑71 (MQ=255) tGATTAAAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATg > 1:7347/1‑71 (MQ=255) cataaaatgtgaccaataaaacaaattatgcaattttttagttgcatgaactCGc > 1:1499539‑M1/53‑55 (MQ=255) gATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGc > 1:2447083/1‑71 (MQ=255) gATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGAATCAAGTAGCGCGCATTCTATGGAGACATg > 1:67112/1‑70 (MQ=255) taaaatgtgaccaataaaacaaattatgcaattttttagttgcatgaactCGCAt < 1:3196615‑M1/5‑1 (MQ=255) taaaatgtgaccaataaaacaaattatgcaattttttagttgcatgaactCGCAt < 1:684916‑M1/5‑1 (MQ=255) taaaatgtgaccaataaaacaaattatgcaattttttagttgcatgaactCGCATTCTATGGAGACATGCg > 1:3576196‑M1/51‑71 (MQ=255) taaaatgtgaccaataaaacaaattatgcaattttttagttgcatgaactCGCATTCTATGGAGACATGCg > 1:3799964‑M1/51‑71 (MQ=255) taaaatgtgaccaataaaacaaattatgcaattttttagttgcatgaactCGCATTCTATGGAGACATGCg > 1:1058224‑M1/51‑71 (MQ=255) aTTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGc < 1:2503806/70‑1 (MQ=255) aTTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGc < 1:3301357/70‑1 (MQ=255) aTTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGc < 1:1745749/70‑1 (MQ=255) aTTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGc < 1:3637032/70‑1 (MQ=255) ttACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGc < 1:1687984/69‑1 (MQ=255) tACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAg > 1:1761561/1‑71 (MQ=255) aaatgtgaccaataaaacaaattatgcaattttttagttgcatgaactCGCATTCTATGGAGACATGCGa > 1:1261328‑M1/49‑70 (MQ=255) cAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGtt > 1:3118085/1‑71 (MQ=255) cAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGt > 1:3636489/1‑70 (MQ=255) gTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCAt < 1:3221540/71‑1 (MQ=255) gTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCAt < 1:2005495/71‑1 (MQ=255) gTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCAt < 1:439963/71‑1 (MQ=255) gTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCAt < 1:1574575/71‑1 (MQ=255) taaaacaaattatgcaattttttagttgcatgaactCg > 1:354510‑M1/37‑38 (MQ=255) taaaacaaattatgcaattttttagttgcatgaactCGCa < 1:2722788‑M1/4‑1 (MQ=255) taaaacaaattatgcaattttttagttgcatgaactCGCa < 1:1488008‑M1/4‑1 (MQ=255) ctacctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGc < 1:950650/63‑1 (MQ=255) ctacctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGc < 1:2040132/63‑1 (MQ=255) tacctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTaaaa > 1:2953663/1‑70 (MQ=255) tacctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTaaaa > 1:2953661/1‑70 (MQ=255) tacctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTaaa < 1:3369616/69‑1 (MQ=255) acctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCaa > 1:2889425/1‑63 (MQ=255) cctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAAt > 1:2057709/1‑71 (MQ=255) ctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACa < 1:1954540/46‑1 (MQ=255) ctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACa < 1:1456613/46‑1 (MQ=255) ctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACa < 1:574898/46‑1 (MQ=255) ctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACa < 1:2508197/46‑1 (MQ=255) ctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACa < 1:89883/46‑1 (MQ=255) ctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAAtt < 1:3637064/71‑1 (MQ=255) ctacTGAGCTAAGTCGGCATCAAGTAGCGCGCAATCTATGGAGACa < 1:1259210/46‑1 (MQ=255) tacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATg < 1:1396311/39‑1 (MQ=255) acTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATg > 1:2747160/1‑46 (MQ=255) acTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTg > 1:3519196/1‑70 (MQ=255) cTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTaaaaa < 1:2628722/65‑1 (MQ=255) cTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTaaaaa < 1:3790093/65‑1 (MQ=255) cTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTaaaaa < 1:2516846/65‑1 (MQ=255) cTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCa > 1:2712203/1‑71 (MQ=255) cTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCa < 1:1722284/71‑1 (MQ=255) tGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGATACATGCGAGt < 1:3749136/49‑1 (MQ=255) gAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCAt > 1:919640/1‑70 (MQ=255) aGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGc < 1:467071/43‑1 (MQ=255) aGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGc < 1:3857549/43‑1 (MQ=255) aGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGc < 1:3617593/43‑1 (MQ=255) aGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGc < 1:3380218/43‑1 (MQ=255) aGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGc < 1:3520326/43‑1 (MQ=255) aGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATaa > 1:938271/1‑71 (MQ=255) gCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAAt < 1:2505701/71‑1 (MQ=255) cTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGa > 1:3556428/1‑43 (MQ=255) cTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTc > 1:913902/1‑47 (MQ=255) cTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAAt < 1:780589/70‑1 (MQ=255) tAAGTCGGCATCAAGTATCGCGGATTCTATGGAGACATGCGAGTTCAt < 1:2070673/48‑1 (MQ=255) tAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCAt < 1:834026/66‑1 (MQ=255) tAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCAt < 1:2458507/66‑1 (MQ=255) tAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCAt < 1:2743434/66‑1 (MQ=255) tAAGGCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCAt < 1:1097862/66‑1 (MQ=255) ttttttagttgcatgaactCGCATTCTATGGAGACATGc > 1:802630‑M1/20‑39 (MQ=255) aGTCGGCATCAAGTAGCGCGCATTCTATGGAGACa < 1:480601/35‑1 (MQ=255) aGTCGGCATCAAGTAGCGCGCATTCTATGGAGACa < 1:878126/35‑1 (MQ=255) aGTCGGCATCAAGTAGCGCGCATTCTATGGAGACa < 1:3636281/35‑1 (MQ=255) aGTCGGCATCAAGTAGCGCGCATTCTATGGAGACa < 1:3218732/35‑1 (MQ=255) aGTCGGCATCAAGTAGCGCGCATTCTATGGAGACa < 1:3405678/35‑1 (MQ=255) aGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAAttt < 1:3214098/69‑1 (MQ=255) gCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTAt < 1:1403001/71‑1 (MQ=255) tCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGttt < 1:1056274/65‑1 (MQ=255) aaGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGt > 1:2753876/1‑70 (MQ=255) aaGTAGAGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGt > 1:3240945/1‑70 (MQ=255) gcgcgcATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACAtt < 1:1333824/71‑1 (MQ=255) cgcgcATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGtttt < 1:238829/58‑1 (MQ=255) | CGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATT > minE/2266943‑2267078 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |