| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2267011 = | 89 (1.450) | 5 (0.090) | 3/90 | NT | 7.3% | intergenic (‑12/‑350) | thrU/coaA | tRNA‑Thr/pantothenate kinase |
| ? | minE | 2267032 = | 46 (0.840) | intergenic (‑33/‑329) | thrU/coaA | tRNA‑Thr/pantothenate kinase | |||||
TACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGACACGATGAAGAAA > minE/2266963‑2267099 | tACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAg > 1:1761561/1‑71 (MQ=255)tACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAg > 1:2616791/1‑71 (MQ=255)aaatgtgaccaataaaacaaattatgcaattttttagttgcatgaactCGCATTCTATGGAGACATGCGa > 1:1261328‑M1/49‑70 (MQ=255) aCAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAg < 1:3304831/70‑1 (MQ=255) cAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGtt > 1:3118085/1‑71 (MQ=255) cAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGt > 1:3636489/1‑70 (MQ=255) gTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCAt < 1:2005495/71‑1 (MQ=255) gTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCAt < 1:2011320/71‑1 (MQ=255) gTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCAt < 1:1574575/71‑1 (MQ=255) gTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCAt < 1:439963/71‑1 (MQ=255) gTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCAt < 1:3221540/71‑1 (MQ=255) ctacctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGc < 1:2040132/63‑1 (MQ=255) ctacctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGc < 1:950650/63‑1 (MQ=255) tacctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTaaaa > 1:2953661/1‑70 (MQ=255) tacctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTaaaa > 1:2953663/1‑70 (MQ=255) tacctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTaaa < 1:3369616/69‑1 (MQ=255) acctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCaa > 1:2889425/1‑63 (MQ=255) cctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAAt > 1:2057709/1‑71 (MQ=255) ctacTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAAtt < 1:3637064/71‑1 (MQ=255) acTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTg > 1:3519196/1‑70 (MQ=255) cTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTaaaaa < 1:2628722/65‑1 (MQ=255) cTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTaaaaa < 1:2516846/65‑1 (MQ=255) cTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTaaaaa < 1:3790093/65‑1 (MQ=255) cTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCa > 1:2712203/1‑71 (MQ=255) cTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCa < 1:1722284/71‑1 (MQ=255) tGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGATACATGCGAGt < 1:3749136/49‑1 (MQ=255) gAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCAt > 1:919640/1‑70 (MQ=255) aGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATaa > 1:3576188/1‑71 (MQ=255) aGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATaa > 1:938271/1‑71 (MQ=255) gCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAAt < 1:2505701/71‑1 (MQ=255) cTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGa > 1:3556428/1‑43 (MQ=255) cTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTc > 1:913902/1‑47 (MQ=255) cTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAAt < 1:780589/70‑1 (MQ=255) tAAGTCGGCATCAAGTATCGCGGATTCTATGGAGACATGCGAGTTCAt < 1:2070673/48‑1 (MQ=255) tAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCAt < 1:834026/66‑1 (MQ=255) tAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCAt < 1:2458507/66‑1 (MQ=255) tAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCAt < 1:2743434/66‑1 (MQ=255) tAAGGCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCAt < 1:1097862/66‑1 (MQ=255) aGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAAttt < 1:3214098/69‑1 (MQ=255) gCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTAt < 1:3121329/71‑1 (MQ=255) gCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTAt < 1:1403001/71‑1 (MQ=255) tCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGttt < 1:1056274/65‑1 (MQ=255) aaGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGt > 1:2753876/1‑70 (MQ=255) aaGTAGAGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGt > 1:3240945/1‑70 (MQ=255) gcgcgcATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACAtt < 1:1333824/71‑1 (MQ=255) cgcgcATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGtttt < 1:238829/58‑1 (MQ=255) cgcgcATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACAtt < 1:866848/70‑1 (MQ=255) tcgcatgtctccatagaatgcgAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACAttt > 1:1261328‑M2/23‑70 (MQ=255) cgcatgtctccatagaatgcgAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTa > 1:1058224‑M2/22‑71 (MQ=255) cgcatgtctccatagaatgcgAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTa > 1:3799964‑M2/22‑71 (MQ=255) cgcatgtctccatagaatgcgAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTa > 1:3576196‑M2/22‑71 (MQ=255) gcatgtctccatagaatgcgAGTTCATGCAACTaaaaaa > 1:802630‑M2/21‑39 (MQ=255) ATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGttt > 1:1428804‑M1/1‑52 (MQ=255) ATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGc > 1:3858702‑M1/1‑71 (MQ=255) TTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCg > 1:887552‑M1/1‑71 (MQ=255) cTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGtttt > 1:677897/1‑50 (MQ=255) tGGAGACATTCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGactc < 1:2742641/70‑3 (MQ=255) tGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGacac < 1:985110/70‑1 (MQ=255) tGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGacac < 1:1230375/70‑1 (MQ=255) tGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGacac < 1:2491224/70‑1 (MQ=255) tGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGaca < 1:2502899/69‑1 (MQ=255) ggAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTTTTTTATTGGTCACATTTTATGCGACACGa > 1:1934992/1‑71 (MQ=255) ggAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGACACGa > 1:569221/1‑71 (MQ=255) gagaCATGCGAGTTCATGCAACTATAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGACACGAt > 1:2220026/1‑71 (MQ=255) gagaCATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGACACGAt > 1:904334/1‑71 (MQ=255) cATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGACACGaag > 1:3764836/1‑66 (MQ=255) cATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGACACGATgaag < 1:1162562/71‑1 (MQ=255) cATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGACACGATgaag < 1:979357/71‑1 (MQ=255) atgcgAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTa < 1:684916‑M2/50‑1 (MQ=255) atgcgAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTa < 1:3196615‑M2/50‑1 (MQ=255) atgcgAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGACACGATgaaga < 1:2638546‑M2/66‑1 (MQ=255) tgcgAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTa < 1:2722788‑M2/36‑1 (MQ=255) tgcgAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTa < 1:1488008‑M2/36‑1 (MQ=255) tgcgAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGACACGATgaagaa < 1:3102872‑M2/67‑1 (MQ=255) gcgAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATg > 1:1499539‑M2/4‑55 (MQ=255) gcgAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGc > 1:3619389‑M2/4‑56 (MQ=255) gcgAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGACACGATGAAGaaa > 1:3114291‑M2/4‑71 (MQ=255) cgAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTa > 1:354510‑M2/3‑38 (MQ=255) | TACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCGGCATCAAGTAGCGCGCATTCTATGGAGACATGCGAGTTCATGCAACTAAAAAATTGCATAATTTGTTTTATTGGTCACATTTTATGCGACACGATGAAGAAA > minE/2266963‑2267099 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |