New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	minE	= 558469	19 (0.370)	12 (0.240) +GT	7/98	NT	29.7%	intergenic (+19/‑285)	iaaA/cmr	L‑asparaginase/multidrug efflux system protein
	?	minE	1659293 =	40 (0.770)					coding (1493/1542 nt)	ppx	exopolyphosphatase

CAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/558401‑558469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGGCGGTTGAAAATT  >  minE/1659293‑1659309                                                                      ||                  CAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGT                   >  1:1755749/1‑71  AACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGTG                  <  1:1151814/71‑1     CACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTG               <  1:3078346/71‑1      ACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTGG              >  1:463477/1‑71       CCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTGGC             >  1:2855820/1‑71         GGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTGGCGG           <  1:1854703/71‑1         GGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTGGCG            <  1:2402900/70‑1          GTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTGGCGGT          <  1:1380310/71‑1                 CCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTGGCGGTTGAAAAT   <  1:1013185/71‑1                 CCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTGGCGGTTGAAAA    <  1:2357089/70‑1                 CCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTGGCGGTTGAAAA    <  1:3081445/70‑1                 CCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTGGC             <  1:2189083/61‑1                  CGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTGGCGGTTGAAAATc  <  1:771458/71‑2                                         CACACAGTGATGAACTTGATGCCGGTAATGTGCTGGCGGTTGAAAA    <  1:228236/46‑1                                         CACACAGTGATGAACTTGATGCCGGTAATGTGCTGGCGGTTGAAAA    <  1:2785222/46‑1                                                 GATGAACTTGATGCCGGTAATGTGCTGGCGGTTGAAAAT   <  1:2955357/39‑1                                                                      ||                  CAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGATGAACTTGATGCCGGTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/558401‑558469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGGCGGTTGAAAATT  >  minE/1659293‑1659309

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.