| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 558469 | 19 (0.370) | 12 (0.240) +GT |
7/98 | NT | 29.7% | intergenic (+19/‑285) | iaaA/cmr | L‑asparaginase/multidrug efflux system protein |
| ? | minE | 1659293 = | 40 (0.770) | coding (1493/1542 nt) | ppx | exopolyphosphatase | |||||
TGGTTTAGTCAGAATGCGCTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTACACCAGAAATCGCCGCTTAATACTTTGCGGGCCGACGAG > minE/1659223‑1659361 | aaccaccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatgtg < 1:1151814‑M2/1‑1 (MQ=255) gTTTAGTCAGAATGCGCTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGtggctggct < 1:592320/71‑1 (MQ=255) gTTTAGTCAGAATGCGCTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGtggctggct < 1:3003013/71‑1 (MQ=255) tttAGTCAGAATGCGCTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGtggctggctg < 1:2988785/71‑1 (MQ=255) caccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatgtGCTg < 1:3078346‑M2/4‑1 (MQ=255) accggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatgtGCTgg > 1:463477‑M2/67‑71 (MQ=255) tAGTCAGAATGCGCTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGtggctggctgg < 1:2803308/70‑1 (MQ=255) ccggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatgtGCTGGc > 1:2855820‑M2/66‑71 (MQ=255) ggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatgtGCTGGCgg < 1:1854703‑M2/8‑1 (MQ=255) ggtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatgtGCTGGCg < 1:2402900‑M2/7‑1 (MQ=255) gtatctaccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatgtGCTGGCGGt < 1:1380310‑M2/9‑1 (MQ=255) aGAATGCGCTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGtt < 1:47108/70‑1 (MQ=255) aGAATGCGCTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTg < 1:1630193/71‑1 (MQ=255) aaTGCGCTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGaa < 1:3678235/71‑1 (MQ=255) tGCGCTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGaaaa > 1:992429/1‑71 (MQ=255) tGCGCTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGaaaa < 1:2025469/71‑1 (MQ=255) tGCGCTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGaaaa < 1:1286697/71‑1 (MQ=255) gcgcTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAAt > 1:51305/1‑71 (MQ=255) ccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatgtGCTGGc < 1:2189083‑M2/6‑1 (MQ=255) ccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatgtGCTGGCGGTTGaaaa < 1:3081445‑M2/15‑1 (MQ=255) ccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatgtGCTGGCGGTTGaaaa < 1:2357089‑M2/15‑1 (MQ=255) ccgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatgtGCTGGCGGTTGAAAAt < 1:1013185‑M2/16‑1 (MQ=255) cgtgaaaaaggggacaccgttgccacacagtgatgaacttgatgccggtaatgtGCTGGCGGTTGAAAatc < 1:771458‑M2/17‑2 (MQ=255) cgcTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGt < 1:2035746/63‑1 (MQ=255) cgcTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAAtt < 1:3189689/71‑1 (MQ=255) gcTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGtggctgg < 1:1570830/54‑1 (MQ=255) gcTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGtggctgg < 1:2962725/54‑1 (MQ=255) gcTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTg < 1:2288454/71‑1 (MQ=255) gcTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTg < 1:1810706/71‑1 (MQ=255) gcTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTg < 1:3467771/71‑1 (MQ=255) gcTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGGTGAAAATTg < 1:1628653/71‑1 (MQ=255) tGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGtggctgg > 1:3885494/1‑52 (MQ=255) ggTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTg > 1:1479078/1‑68 (MQ=255) gTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTgaag < 1:3154792/70‑1 (MQ=255) tACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGaa < 1:660422/61‑1 (MQ=255) cTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGtggctggctg < 1:593362/50‑1 (MQ=255) cTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTgaagaaga < 1:3188915/71‑1 (MQ=255) gCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTgaagaaga > 1:3189239/1‑69 (MQ=255) gCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTgaagaaga > 1:457146/1‑69 (MQ=255) cTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTgaagaagaa < 1:1827250/69‑1 (MQ=255) ttGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGaa < 1:607204/55‑1 (MQ=255) gATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTa > 1:1970633/1‑70 (MQ=255) aTCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGaaa > 1:3366879/1‑66 (MQ=255) aTCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTac < 1:2734264/70‑1 (MQ=255) tCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGaa < 1:2389351/51‑1 (MQ=255) tGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGt < 1:2573476/45‑1 (MQ=255) ggAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGaa < 1:3685774/48‑1 (MQ=255) gAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTACACCAg > 1:2121340/1‑70 (MQ=255) gAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTACACCAg > 1:1465490/1‑70 (MQ=255) aaaaGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTACACCAGa > 1:3646887/1‑70 (MQ=255) cacacagtgatgaacttgatgccggtaatgtGCTGGCGGTTGaaaa < 1:2785222‑M2/15‑1 (MQ=255) cacacagtgatgaacttgatgccggtaatgtGCTGGCGGTTGaaaa < 1:228236‑M2/15‑1 (MQ=255) gAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCgg < 1:385202/36‑1 (MQ=255) gAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTACACCAGAAATcgc < 1:1620457/71‑1 (MQ=255) aGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTACACCAGAAATcgcc > 1:1945631/1‑71 (MQ=255) aGCAAGAATACT‑‑GAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTACACCAGAAATcgccgc > 1:1350077/1‑71 (MQ=255) gatgaacttgatgccggtaatgtGCTGGCGGTTGAAAAt < 1:2955357‑M2/16‑1 (MQ=255) aGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTga > 1:1504592/1‑42 (MQ=255) aGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTACACCAGAAATCGCCGCt > 1:1844235/1‑70 (MQ=255) gAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGaa > 1:2549539/1‑35 (MQ=255) aaTACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAg > 1:3071911/1‑49 (MQ=255) cTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTACACCAGAAATCGCCGCTTAATACt > 1:923288/1‑71 (MQ=255) ggAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTACACCAGAAATCGCCGCTTAATACttt < 1:3355234/70‑1 (MQ=255) ggctggctggcGGTTGAAAATTGAAGAAGAAAGTacac > 1:1851718/1‑38 (MQ=255) ggctggctggcGGTTGAAAATTGAAGAAGAAAGTACACCAGaaa > 1:1073767/1‑44 (MQ=255) ggctggcGGTTGAAAATTGAAGAAGAAAGTACACCAGAAATCGCCGCTTAATACtt < 1:780227/56‑1 (MQ=255) ggctggcGGTTGAAAATTGAAGAAGAAAGTACACCAGAAATCGCCGCTTAATACTTTGCGGGCCGACgag > 1:690582/1‑70 (MQ=255) | TGGTTTAGTCAGAATGCGCTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTACACCAGAAATCGCCGCTTAATACTTTGCGGGCCGACGAG > minE/1659223‑1659361 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |