| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1262440 | 37 (0.710) | 5 (0.110) | 3/88 | NT | 13.3% | coding (743/747 nt) | cutC | copper homeostasis protein |
| ? | minE | = 1262456 | 33 (0.740) | coding (727/747 nt) | cutC | copper homeostasis protein | |||||
CCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1262367‑1262440‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatcattGAACGCCATCAGGCCAAATGATTTTTACCGTTGCATCATGTCGCCCAATATGATGCTTGCTCGTACCAG < minE/1262456‑1262388 CCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAATCATCATATTGGGCGACATGATGCAACGGTAAAAAT > 1:3845009/1‑70CCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAAT > 1:1351303/1‑70CCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAAT > 1:3891344/1‑70 CCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCA < 1:1112058/71‑1 TGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATT > 1:1458116/1‑71 GGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTGAACGCCAT < 1:3825001/67‑1 GGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTGAACGCCAT < 1:3405871/67‑1 GGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATT > 1:1001673/1‑56 GGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCA > 1:1600223/1‑49 CAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATT > 1:1441603/1‑43 AAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCA < 1:279124/40‑1 TCATATTGGGCGACATGATGCAACGGTAAAAATCATT > 1:1648598/1‑37 ATATTGGGCGACATGATGCAACGGTAAAAATCATTGAACGCCATCAGGCCAAATGAT > 1:3715181/1‑57 GCGACATGATGCAACGGTAAAAATCATTGAACGCCATCAGGCCAAATGA < 1:716815/49‑1 GCGACATGATGCAACGGTAAAAATCATTGAACGCCATCAGGCCAAATGA < 1:1403283/49‑1 ATCATTGAACGCCATCAGGCCAAATGATTTTTACCGTTGCA < 1:3883401/41‑1 CATTGAACGCCATCAGGCCAAATGATTTTTACCGTTGCATCATGTCGCCCAATATGATGCTTGCTCGTAC > 1:2468778/1‑70 ATTGAACGCCATCAGGCCAGATGATTTTTACCGTTGCATCATGTCGCCCAATATGATGCTTGCTCGTAC > 1:1121318/1‑69 ATTGAACGCCATCAGGCCAAATGATTTTTACCGTTGCATCATGTCGCCCAATATGATGCTTGCTCGTACCA < 1:515469/71‑1 TTGAACGCCATCAGGCCAAATGATTTTTACCGTTGCATCATGTCGCCCAATATGATGCTTGCTCGTACCAG < 1:3746859/71‑1 TTGAACGCCATCAGGCCAAATGATTTTTACCGTTGCATCATGTCGCCCAATATGATGCTTGCTCGTACCAG < 1:3071671/71‑1 TGAACGCCATCAGGCCAAATGATTTTTACCGTTGCATAATGTCGCCCAA > 1:3230183/1‑49 CCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1262367‑1262440‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatcattGAACGCCATCAGGCCAAATGATTTTTACCGTTGCATCATGTCGCCCAATATGATGCTTGCTCGTACCAG < minE/1262456‑1262388 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |