| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1298934 = | 52 (1.000) | 6 (0.130) | 4/88 | NT | 11.1% | coding (142/546 nt) | cobU | bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase |
| ? | minE | 1298968 = | 51 (1.140) | coding (108/546 nt) | cobU | bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase | |||||
TTCACAGGTTCTGTATATCGCTACCTCGCAAATCCTTGATGATGAGATGGCTGCACGGATAGAACATCAT‑‑‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1299004‑1298934‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcat‑‑‑cAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGCCTCTGCGTGGCGACT > minE/1298968‑1299036 TTCACAGGTTCTGTATATCGCTACCTCGCAAATCCTTGATGATGAGATGGCTGCACGGATAGAACATCAT‑‑‑C > 1:2573297/1‑71TTCACAGGTTCTGTATATCGCTACCTCGCAAATCCTTGATGATGAGATGGCTGCACGGATAGAACATCA < 1:3090552/69‑1 CACAGGTTCTGTATATCGCTACCTCGCAAATCCTTGATGATGAGATGGCTGCACGGATAGAACAT > 1:2108699/1‑65 GTATATCGCTACCTCGCAAATCCTTGATGATGAGATGGCTGCACGGATAGAACATCAT > 1:2338998/1‑58 GCTACCTCGCAAATCCTTGATGATGAGATGGCTGCACGGATAGAAC > 1:1049250/1‑46 CGCAAATCCTTGATGATGAGATGGCTGCACGGATAGAACATC < 1:3216491/42‑1 GCAAATCCTTGATGATGAGATGGCTGCACGGATAGAACATCAT > 1:2765418/1‑43 GATGATGAGATGGCTGCACGGATAGAACATCATCGGCAAGGATTTGCGAGGTAGCGATATACAGAACCTG > 1:1297150/1‑70 GATGATGAGATGGCTGCACGGATAGAACATCAT‑‑‑CGAGGATTTGCGAGGTAGCGATATACAGAACCTGT > 1:1613884/1‑68 GATGAGATGGCTGCACGGATAGAACATCAT‑‑‑CAAGGATTTGCGAGGTAGCGATATACAGA < 1:431105/59‑1 GATGAGATGGCTGCACGGATAGAACATCAT‑‑‑CAAGGAT < 1:677655/37‑1 GATGAGATGGCTGCACGGATAGAACATCAT‑‑‑CAAGGAT < 1:3224661/37‑1 TGAGATGGCTGCACGGATAGAACATCAT‑‑‑CAAGGATTTGCGAGGTAGCGATATACAGAAC > 1:1068770/1‑59 ATCAT‑‑‑CAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGCCTCTGCGTG < 1:225205/69‑1 ATCAT‑‑‑CAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGCCTCTGCGT < 1:1570494/68‑1 CAT‑‑‑CAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAA < 1:13744/41‑1 T‑‑‑CAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGCCTCTGCGTGGCGACT > 1:3792072/1‑71 CAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGCCTCTG < 1:453037/60‑1 TTCACAGGTTCTGTATATCGCTACCTCGCAAATCCTTGATGATGAGATGGCTGCACGGATAGAACATCAT‑‑‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1299004‑1298934‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcat‑‑‑cAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGCCTCTGCGTGGCGACT > minE/1298968‑1299036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |