| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1298934 = | 52 (1.000) | 6 (0.130) | 4/88 | NT | 11.1% | coding (142/546 nt) | cobU | bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase |
| ? | minE | 1298968 = | 51 (1.140) | coding (108/546 nt) | cobU | bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase | |||||
CACTGTGCGCCAGTGCTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGCCTCTGCGTGGCGACT > minE/1298902‑1299036 | cACTGTGCGCCAGTGCTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAgg < 1:1268655/70‑1 (MQ=255)cACTGTGCGCCAGTGCTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAg < 1:1075605/69‑1 (MQ=255) aCTGTGCGCCAGTGCTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGAt < 1:932948/71‑1 (MQ=255) aCTGTGCGCCAGTGCTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGAt < 1:463799/71‑1 (MQ=255) tgCGCCAGTGCTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGc > 1:2820125/1‑71 (MQ=255) tgCGCCAGTGCTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGc > 1:3244137/1‑71 (MQ=255) gcgcCAGTGCTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGAttt < 1:2971220/68‑1 (MQ=255) cAGTGCTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAgg > 1:3451084/1‑70 (MQ=255) cAGTGCTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGt < 1:3504318/71‑1 (MQ=255) aGTGCTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAgg > 1:3501870/1‑69 (MQ=255) tGCTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGc > 1:3464705/1‑71 (MQ=255) cTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGa < 1:500441/71‑1 (MQ=255) cTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGa < 1:1944846/71‑1 (MQ=255) tCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCtcatcatca < 1:3690829/51‑1 (MQ=255) tCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCtcatcatca < 1:1525876/51‑1 (MQ=255) cGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGatat < 1:2528610/71‑1 (MQ=255) ggcggcCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGt > 1:3709331/1‑61 (MQ=255) ggcggcCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTa > 1:3624897/1‑62 (MQ=255) ggcggcCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATAc < 1:2092134/71‑1 (MQ=255) gcggcCTTGCCGATGATGTTCTATCCGTGCAGCCATATCATCATCAAGGATTTGCGAGGTAg > 1:1957809/1‑62 (MQ=255) ggcCTTGCCGATGATGTTCTATCCGTGCTGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGa < 1:547055/71‑1 (MQ=255) ggcCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGa < 1:1419930/71‑1 (MQ=255) gcCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGaa > 1:2937247/1‑71 (MQ=255) ccTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAAc > 1:3219982/1‑71 (MQ=255) ccTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAAc < 1:662801/71‑1 (MQ=255) ccTTGCCGATGATGTTCTATCCGTGCAGCCATCTCACCATCAAGGATTTGCGAGGTAGCg < 1:599474/60‑1 (MQ=255) ttGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGata > 1:3901856/1‑61 (MQ=255) ttGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCt > 1:1866850/1‑71 (MQ=255) tGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCtg > 1:1542342/1‑71 (MQ=255) gatgatgagatggctgcacggatagaacatcatcggcAAGGATTTGCGAGGTAGCGATATACAGAACCtg > 1:1297150‑M2/38‑70 (MQ=255) gCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGAtt > 1:60813/1‑44 (MQ=255) gCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGt > 1:1605624/1‑52 (MQ=255) gCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGaa > 1:2261145/1‑66 (MQ=255) gCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCtgt > 1:391316/1‑71 (MQ=255) gCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCtgt > 1:2165102/1‑71 (MQ=255) gCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCtgt > 1:3179705/1‑71 (MQ=255) gCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCtgt > 1:2850177/1‑71 (MQ=255) gCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCt < 1:2851774/69‑1 (MQ=255) ccGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCtgtg < 1:1133746/71‑1 (MQ=255) ccGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCtgt < 1:1860232/70‑1 (MQ=255) ccGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCtgt < 1:461570/70‑1 (MQ=255) ccGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCtgt < 1:1434435/70‑1 (MQ=255) ccGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCtgt < 1:3052809/70‑1 (MQ=255) cGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCtgtg > 1:3268401/1‑70 (MQ=255) gatgatgagatggctgcacggatagaacatcatcGAGGATTTGCGAGGTAGCGATATACAGAACCtgt > 1:1613884‑M2/35‑68 (MQ=255) GATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGaa > 1:2573297‑M1/1‑71 (MQ=255) ATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGc > 1:2765418‑M1/1‑43 (MQ=255) ATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATAc > 1:2338998‑M1/1‑58 (MQ=255) TGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGaa < 1:3090552‑M1/69‑1 (MQ=255) gatgagatggctgcacggatagaacatcatcAAGGAt < 1:3224661‑M2/6‑1 (MQ=255) gatgagatggctgcacggatagaacatcatcAAGGAt < 1:677655‑M2/6‑1 (MQ=255) gatgagatggctgcacggatagaacatcatcAAGGATTTGCGAGGTAGCGATATACAGa < 1:431105‑M2/28‑1 (MQ=255) GATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCg < 1:3216491‑M1/42‑1 (MQ=255) ATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCtgtg > 1:2108699‑M1/1‑65 (MQ=255) tgagatggctgcacggatagaacatcatcAAGGATTTGCGAGGTAGCGATATACAGAAc > 1:1068770‑M2/30‑59 (MQ=255) GTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGc > 1:1049250‑M1/1‑46 (MQ=255) ttCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGa < 1:924134/63‑1 (MQ=255) cTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGat > 1:1444401/1‑46 (MQ=255) cTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGat > 1:3269352/1‑46 (MQ=255) aTCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAag < 1:2957796/61‑1 (MQ=255) tCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAAc > 1:2325663/1‑52 (MQ=255) tCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATa < 1:3888509/71‑1 (MQ=255) ccGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAAt > 1:816168/1‑69 (MQ=255) cGTGCAGCCATCTCATCATCTAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATaa < 1:2304387/70‑1 (MQ=255) cGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATaa < 1:1505236/70‑1 (MQ=255) gTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAgc > 1:2547471/1‑71 (MQ=255) cAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAAc > 1:2602601/1‑46 (MQ=255) gCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCaa < 1:2961762/61‑1 (MQ=255) cATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGcc < 1:2402650/67‑1 (MQ=255) tctcATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTc > 1:3269619/1‑52 (MQ=255) tctcATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTc > 1:3477350/1‑52 (MQ=255) ctcATCATCAAGGATTTACGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGCCTCTGCGt > 1:1141219/1‑71 (MQ=255) atcatcAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGCCTCTGCGt < 1:1570494‑M2/62‑1 (MQ=255) atcatcAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGCCTCTGCGTg < 1:225205‑M2/63‑1 (MQ=255) catcAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGaa < 1:13744‑M2/37‑1 (MQ=255) tcAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGCCTCTGCGTGGCGAct > 1:3792072‑M2/3‑71 (MQ=255) cAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGCCTCTg < 1:453037‑M2/59‑1 (MQ=255) aaGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCa < 1:1778574/46‑1 (MQ=255) aaGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGCCTCTGCGTGGCGa > 1:896532/1‑67 (MQ=255) | CACTGTGCGCCAGTGCTCCGGGCGGCCTTGCCGATGATGTTCTATCCGTGCAGCCATCTCATCATCAAGGATTTGCGAGGTAGCGATATACAGAACCTGTGAAGAGTCCCCAATAAGCGCCTCTGCGTGGCGACT > minE/1298902‑1299036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |