| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2403490 = | 77 (1.490) | 5 (0.100) | 3/96 | NT | 6.4% | coding (362/825 nt) | dapF | diaminopimelate epimerase |
| ? | minE | 2403514 = | 75 (1.540) | coding (338/825 nt) | dapF | diaminopimelate epimerase | |||||
Only 100 of 104 total aligned reads displayed.
GGCGGCGCGCATAATATAGGTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGTTGGCGGTGCT > minE/2403420‑2403560 | ggcggcGCGCATAATATAGGTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTgg > 1:1841293/1‑71 (MQ=255)ggcggcGCGCATAATATAGGTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTgg > 1:302180/1‑71 (MQ=255) gcggcgCGCATAATATAGGTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTggg < 1:1803982/71‑1 (MQ=255) gcggcgCGCATAATATAGGTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTggg < 1:1554182/71‑1 (MQ=255) caataagcgtgatatccgcgtcagcaccgccaacgggcggatggttctgaccgtcaccgatgatgatctgg < 1:884525‑M1/2‑1 (MQ=255) aataagcgtgatatccgcgtcagcaccgccaacgggcggatggttctgaccgtcaccgatgatgatctGGt > 1:2399129‑M1/69‑71 (MQ=255) aataagcgtgatatccgcgtcagcaccgccaacgggcggatggttctgaccgtcaccgatgatgatctGGt > 1:3116032‑M1/69‑71 (MQ=255) gcgcgcATAATATAGGTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTc < 1:92306/71‑1 (MQ=255) gcgcgcATAATATAGGTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTc < 1:2431787/71‑1 (MQ=255) gcgcgcATAATATAGGTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTc < 1:2831591/71‑1 (MQ=255) gcATAATATAGGTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGcc > 1:1314950/1‑70 (MQ=255) gcATAATATAGGTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGcc > 1:3613909/1‑70 (MQ=255) taataTAGGTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCata > 1:3383089/1‑71 (MQ=255) taataTAGGTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCata > 1:534971/1‑71 (MQ=255) taataTAGGTCTTTTCCGCTTTGTTAGCGCGAAACCGCACGGCGGAAGGTTCGAAGTTCGGTTCGCCCata > 1:3376697/1‑71 (MQ=255) aataTAGGTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCatat > 1:1950798/1‑71 (MQ=255) ggTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTAcg < 1:2561893/70‑1 (MQ=255) ggTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTAcg < 1:2124068/70‑1 (MQ=255) ggTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTAcg < 1:433117/70‑1 (MQ=255) ggTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTGCGCCCATATTTAcg < 1:2720827/70‑1 (MQ=255) cgtcagcaccgccaacgggcggatggttctgaccgtcaccgatgatgatctGGTTCGCCCATATTTAcgcg > 1:3199884‑M1/52‑71 (MQ=255) cgtcagcaccgccaacgggcggatggttctgaccgtcaccgatgatgatctGGTTCGCCCATATTTAcgcg > 1:494727‑M1/52‑71 (MQ=255) tCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCgg < 1:2088638/71‑1 (MQ=255) cTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGt > 1:639182/1‑52 (MQ=255) cTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGt > 1:1882044/1‑52 (MQ=255) cTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATAttt > 1:1035336/1‑64 (MQ=255) cTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATAttt > 1:1213121/1‑64 (MQ=255) ttttCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTggg < 1:1243812/50‑1 (MQ=255) ttCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCg > 1:3299886/1‑52 (MQ=255) ttCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGAc > 1:246438/1‑69 (MQ=255) ttCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGAc > 1:3133963/1‑69 (MQ=255) ccGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGAc > 1:284354/1‑67 (MQ=255) ccGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAg < 1:596455/70‑1 (MQ=255) ccGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAg < 1:3665261/70‑1 (MQ=255) cGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGat < 1:279747/71‑1 (MQ=255) gCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGatc < 1:2899249/71‑1 (MQ=255) cTTTGTTAGCGCGAAACGGCCCGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGatca > 1:908266/1‑71 (MQ=255) cTTTGTTAGCGCGAAACGGCACGGCGGAATGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGatca > 1:2006901/1‑71 (MQ=255) cTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGatca > 1:2299305/1‑71 (MQ=255) cTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGatca > 1:1866809/1‑71 (MQ=255) tttGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATAttt < 1:1216148/55‑1 (MQ=255) ttGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTAc < 1:61826/56‑1 (MQ=255) ttGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTAc < 1:1319528/56‑1 (MQ=255) ttGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGatcat > 1:1188227/1‑70 (MQ=255) tGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGatcatca > 1:1626964/1‑71 (MQ=255) tGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGATGGGTTCGCCCATATTTACGCGGACCAGatcatc < 1:1745624/70‑1 (MQ=255) aacgggcggatggttctgaccgtcaccgatgatgatctGGt > 1:1875111‑M1/39‑41 (MQ=255) ttAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGatcatcat < 1:1619384/70‑1 (MQ=255) tAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTAcg < 1:3770016/53‑1 (MQ=255) tAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCgg < 1:1786044/56‑1 (MQ=255) aGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTAcgcg > 1:662680/1‑54 (MQ=255) aGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCgg > 1:3762412/1‑71 (MQ=255) aGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCg < 1:866983/70‑1 (MQ=255) gcgcGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGt < 1:1214474/71‑1 (MQ=255) cgcgAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGt > 1:2978046/1‑70 (MQ=255) cgcgAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGt > 1:2397004/1‑70 (MQ=255) gcgAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGa > 1:3785678/1‑71 (MQ=255) gAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACg > 1:3689926/1‑71 (MQ=255) gAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACg > 1:3405521/1‑71 (MQ=255) gAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACg > 1:3153111/1‑71 (MQ=255) atggttctgaccgtcaccgatgatgatctGGTTCGCCCATATTTACGCGGAc < 1:2856879‑M1/23‑1 (MQ=255) atggttctgaccgtcaccgatgatgatctGGTTCGCCCATATTTACGCGGAc < 1:2092015‑M1/23‑1 (MQ=255) aaaCGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACgg > 1:851805/1‑71 (MQ=255) aaaCGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACgg > 1:1444881/1‑71 (MQ=255) aaaCGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACgg < 1:688511/71‑1 (MQ=255) aaCGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTAcg > 1:1123188/1‑45 (MQ=255) aaCGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTAcg > 1:2839434/1‑45 (MQ=255) ggcacggcGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAg < 1:3188236/71‑1 (MQ=255) ggcacggcGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAg < 1:2872852/71‑1 (MQ=255) ctgaccgtcaccgatgatgatctGGTTCGCCCATATTTACGCgg > 1:1902479‑M1/24‑44 (MQ=255) acggcGGAAGGTTCGAAGTTGGGTTCGCCCATATTTAc < 1:485453/38‑1 (MQ=255) cggcggAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAAcc < 1:2514414/71‑1 (MQ=255) cggcggAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAAcc < 1:1646481/71‑1 (MQ=255) cggcggAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAAc > 1:1336136/1‑70 (MQ=255) gAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGatcatcat < 1:1118210/49‑1 (MQ=255) gAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGAGGGTCAGAACCATCCg > 1:2008670/1‑71 (MQ=255) gAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATcc < 1:3725537/70‑1 (MQ=255) aaGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGc > 1:1606754/1‑71 (MQ=255) aGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCg > 1:1936119/1‑49 (MQ=255) aGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGcc > 1:1608783/1‑71 (MQ=255) ggTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGccc > 1:261370/1‑71 (MQ=255) ggTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGccc > 1:1328001/1‑71 (MQ=255) gTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGccc > 1:3600958/1‑70 (MQ=255) ttCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGcc < 1:2213379/68‑1 (MQ=255) ttCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGcc < 1:3220377/68‑1 (MQ=255) ttCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCg < 1:596658/70‑1 (MQ=255) ttCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGt < 1:1214685/71‑1 (MQ=255) ttCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGt > 1:1454224/1‑71 (MQ=255) ttCGAAGTTGGGTTCGCCCATATTTACGCGGAACAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGt < 1:2825601/71‑1 (MQ=255) cGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGTTg > 1:1728987/1‑71 (MQ=255) gAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGTTgg < 1:2887097/71‑1 (MQ=255) aaGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGTTGGc < 1:2048331/71‑1 (MQ=255) ttGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGTTGGCGGt > 1:470986/1‑71 (MQ=255) gggTTCGCCCATATTTACGCGGACCAGatcatcat < 1:1188055/35‑1 (MQ=255) gggTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGTTGGCgg < 1:854830/68‑1 (MQ=255) gggTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGTTGGCGGTGc > 1:2227860/1‑71 (MQ=255) GGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGTTGGCGGTGCt > 1:1502037‑M1/1‑71 (MQ=255) GGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGTTGGCGGTGCt < 1:453774‑M1/71‑1 (MQ=255) GGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGTTGGCGGTGCt < 1:3204404‑M1/71‑1 (MQ=255) GGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGTTGGCGGTGCt < 1:872269‑M1/71‑1 (MQ=255) | GGCGGCGCGCATAATATAGGTCTTTTCCGCTTTGTTAGCGCGAAACGGCACGGCGGAAGGTTCGAAGTTGGGTTCGCCCATATTTACGCGGACCAGATCATCATCGGTGACGGTCAGAACCATCCGCCCGTTGGCGGTGCT > minE/2403420‑2403560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |