| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 315707 | NA (NA) | 55 (1.430) | 35/98 | NT | 100% | coding (654/687 nt) | ykgA | predicted DNA‑binding transcriptional regulator |
| ? | W3110S.gb | 576911 = | 0 (0.000) | coding (76/498 nt) | ybcS | predicted lysozyme | |||||
CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/315638‑315707‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTAT > W3110S.gb/576911‑576980 CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA < 1:1712426/71‑1CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA < 1:2037755/71‑1 CTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAAC < 1:3050401/71‑1 CTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA > 1:534877/1‑70 CAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAAC > 1:3601442/1‑69 AGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACT < 1:1759795/69‑1 CGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCC > 1:2922051/1‑70 CGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCC > 1:2846605/1‑70 CAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGG < 1:1171872/71‑1 GAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACG < 1:2867155/70‑1 AAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGA < 1:3414030/70‑1 AAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATG < 1:18999/71‑1 ACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAA > 1:1300233/1‑57 CAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTG > 1:791841/1‑50 CAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA > 1:520058/1‑47 CCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGA < 1:1687828/69‑1 TCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGT > 1:1285484/1‑71 TCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAAC < 1:2322854/56‑1 TCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA < 1:1224071/39‑1 CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTG > 1:335486/1‑71 CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGA > 1:2028038/1‑57 GCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGT < 1:2591203/71‑1 GCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGT < 1:3041472/71‑1 CTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTC < 1:846338/71‑1 CTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGT > 1:1342084/1‑70 AGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGC > 1:908068/1‑71 GCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGG < 1:304347/62‑1 CTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACA > 1:3429611/1‑71 CTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAG > 1:626985/1‑59 TGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGG < 1:926447/55‑1 TGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAAC < 1:841525/45‑1 TGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAAC < 1:1756069/45‑1 GTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATA > 1:1158291/1‑71 GTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATA > 1:2298989/1‑71 GTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATA > 1:2303366/1‑71 TGTCCATATTACGTGGGTAGGATCAACTTGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATAC > 1:1532261/1‑71 TGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGA > 1:1275945/1‑45 TGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGA > 1:1581702/1‑45 GTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAA > 1:3332329/1‑54 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCA > 1:1774658/1‑71 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAA > 1:444649/1‑53 CATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATA > 1:1805107/1‑71 CATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATA < 1:551594/71‑1 CATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAA > 1:2475084/1‑51 CATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAA > 1:2019819/1‑51 TATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACA < 1:3144175/71‑1 TATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATAC > 1:1658962/1‑70 TATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGT < 1:2738966/52‑1 TATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGA < 1:2054262/48‑1 TATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGG < 1:1438489/47‑1 TATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATG < 1:1158564/41‑1 ATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAA > 1:3694487/1‑48 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACA > 1:1069611/1‑69 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATAC > 1:290838/1‑68 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGT > 1:2011070/1‑41 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATG > 1:647447/1‑39 CGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGA < 1:1194807/70‑1 GTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATA > 1:4612/1‑71 GGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATA > 1:1966371/1‑69 GGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATT < 1:1800338/70‑1 tTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAA < 1:219279/61‑1 GTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGT < 1:1262582/71‑1 GTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACA < 1:2534988/61‑1 TAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTT > 1:2843228/1‑71 GATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGT < 1:2598315/71‑1 ATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTG > 1:2359240/1‑71 ATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTG > 1:2757396/1‑71 ATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTG < 1:2422254/71‑1 ATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATAACATACAAAGATATTGTTGGTG > 1:750118/1‑71 ATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTA < 1:1962372/45‑1 ATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTC < 1:954683/40‑1 TCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACA > 1:1733070/1‑46 CAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTA > 1:2451239/1‑71 CAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTA > 1:1058526/1‑71 CAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTA > 1:1683880/1‑71 CAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTA > 1:1380049/1‑71 CAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACA > 1:3347348/1‑45 AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTAAGCTACATACCATACAAAGATATTGTTGGTGTAT > 1:1854268/1‑71 CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/315638‑315707‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTAT > W3110S.gb/576911‑576980 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |