| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 436259 = | 74 (0.970) | 335 (4.780) | 88/92 | NT | 84.4% | intergenic (‑156/‑29) | ybfF/seqA | conserved hypothetical protein/regulatory protein for replication initiation |
| ? | minE | = 2706018 | 56 (0.800) | coding (836/837 nt) | dam | DNA adenine methylase | |||||
Only 100 of 468 total aligned reads displayed.
GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/436331‑436259‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACGTGTGC < minE/2706018‑2705949 CAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAA > 1:1890165/1‑71 CAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAA > 1:1383291/1‑71 AATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAAT < 1:3420927/71‑1 TATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTA > 1:4699627/1‑71 TAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATT > 1:3932418/1‑71 TAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATACAGTGCAGTGTCTTAGCTGAATTATT > 1:1552894/1‑71 AGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTT > 1:4455434/1‑71 GCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTT < 1:903142/71‑1 TAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTC < 1:2512565/70‑1 AGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGC > 1:3531525/1‑71 GAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGC < 1:2220294/70‑1 AGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTAT < 1:2047665/61‑1 TTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGT > 1:4185925/1‑71 TTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGT > 1:3607566/1‑71 TTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGT > 1:4309723/1‑71 TTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTT < 1:4632212/62‑1 TTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTAT < 1:1163883/59‑1 CATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGGAGTGTCTTAGCTGAATTATTTTTTCGCGG > 1:1351129/1‑67 CATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTG > 1:1232997/1‑70 CATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTG > 1:4402563/1‑70 CATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTG > 1:1673757/1‑70 CATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGT > 1:120586/1‑69 ATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGA < 1:2363082/70‑1 ATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGA < 1:731029/70‑1 TCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAA < 1:2799925/71‑1 TCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGA < 1:1261320/50‑1 ATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAAC > 1:3338631/1‑70 ATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAAC < 1:3191068/70‑1 ATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTT < 1:4598211/56‑1 ATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTT > 1:1655398/1‑55 TCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTG < 1:2478320/46‑1 CAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGAC > 1:3556599/1‑71 CAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGAC > 1:618322/1‑71 AACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGAC < 1:2657569/70‑1 ACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTT > 1:3829240/1‑52 CTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGA < 1:3701664/62‑1 TTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTC < 1:131535/53‑1 TTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATT < 1:177868/48‑1 TCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGA > 1:1439651/1‑65 TCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTT > 1:3719964/1‑51 TCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTT > 1:2938155/1‑51 CAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTG < 1:456089/70‑1 CAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAA > 1:3630561/1‑61 CAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTT > 1:2278058/1‑49 AATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGT < 1:3274907/71‑1 AATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTG < 1:2698117/38‑1 ATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAAC < 1:2346684/60‑1 TCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCT < 1:2299124/66‑1 CGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTG > 1:2548866/1‑71 CGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTG > 1:2435662/1‑71 CGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTG > 1:3380527/1‑71 GTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGT < 1:2986144/71‑1 GTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAAT < 1:1754418/37‑1 TTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTA < 1:2637856/71‑1 TTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTA < 1:2083088/71‑1 TTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTT < 1:4659915/41‑1 TTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTT > 1:558157/1‑67 TTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTC > 1:819459/1‑60 TTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTAC < 1:1003671/70‑1 TTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTAC > 1:3488146/1‑70 TTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTAC < 1:4500516/70‑1 TTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGG > 1:4135913/1‑47 TTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCG > 1:699341/1‑44 TTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTT > 1:3154030/1‑39 TCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTG < 1:4277609/66‑1 TCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGGAAC < 1:1298294/50‑1 CTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGA > 1:2253965/1‑51 AATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAG < 1:1958600/70‑1 AATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCC < 1:646730/68‑1 AATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGC < 1:1039125/67‑1 AATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGA > 1:1841751/1‑48 ATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAG < 1:2872067/69‑1 ATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGC < 1:1127376/66‑1 TCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGA > 1:2586362/1‑46 CAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGT < 1:4242904/70‑1 CAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGA > 1:1716030/1‑44 CAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTC > 1:312261/1‑70 GTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCAC < 1:3963413/71‑1 GTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCAC < 1:402061/71‑1 GTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGA > 1:1928105/1‑37 TGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGCTTtg < 1:3648725/48‑3 TCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCACCTT > 1:951832/1‑71 TCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCACCT < 1:2740912/70‑1 TCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCAC > 1:1082882/1‑68 TCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAG > 1:2146488/1‑59 TCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAA > 1:1411291/1‑50 TTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCACCTTTT > 1:3032291/1‑71 TTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCACCT < 1:1797395/68‑1 TTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCAC > 1:1485103/1‑66 AGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCACCTTT < 1:4157817/68‑1 GCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCACCTT > 1:377905/1‑66 CTGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACG < 1:1615761/71‑1 GAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAA > 1:2388847/1‑43 GAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTT > 1:50375/1‑36 ATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCACCTTT > 1:4078034/1‑62 ATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAG > 1:408429/1‑49 ATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCA > 1:3005405/1‑48 TTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACGTGTGC > 1:3233811/1‑71 TTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACGTGTGC < 1:1147553/71‑1 TTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTAC < 1:4040746/65‑1 GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/436331‑436259‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACGTGTGC < minE/2706018‑2705949 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |